Podcast
Questions and Answers
Define enzyme.
Define enzyme.
Enzymes are protein molecules that catalyze (i.e., increase the rates of) chemical reactions.
How does an enzyme speed up a reaction?
How does an enzyme speed up a reaction?
By lowering the activation energy required to begin the reaction.
What is activation energy?
What is activation energy?
The minimum energy required or the thermodynamic barrier that must be overcome for a reaction to take place.
The active site of an enzyme is the region that _____
The active site of an enzyme is the region that _____
True or False: Enzymes lower the free energy of a reaction.
True or False: Enzymes lower the free energy of a reaction.
Describe the substrate specificity of enzymes.
Describe the substrate specificity of enzymes.
What is meant by induced fit?
What is meant by induced fit?
What local conditions affect enzyme activity?
What local conditions affect enzyme activity?
Magnesium, an essential trace element, functions as a ____ in DNA polymerase.
Magnesium, an essential trace element, functions as a ____ in DNA polymerase.
Define cofactor.
Define cofactor.
Define coenzyme.
Define coenzyme.
Describe competitive and non-competitive inhibitors.
Describe competitive and non-competitive inhibitors.
How can the active site lower the activation energy?
How can the active site lower the activation energy?
What theory supports the broad specificity of an enzyme?
What theory supports the broad specificity of an enzyme?
How is activation energy usually supplied to a reaction?
How is activation energy usually supplied to a reaction?
Define allosteric regulation.
Define allosteric regulation.
How do cells regulate enzyme activity?
How do cells regulate enzyme activity?
Define cooperativity.
Define cooperativity.
Why is cooperativity considered allosteric?
Why is cooperativity considered allosteric?
Define feedback inhibition.
Define feedback inhibition.
True or False: By regulating enzyme activity, the cell can control its metabolism.
True or False: By regulating enzyme activity, the cell can control its metabolism.
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Study Notes
Enzymes and Their Functions
- Enzymes are proteins that act as catalysts to increase the rates of chemical reactions.
- They lower the activation energy necessary for reactions, enabling them to proceed more quickly.
- Enzymes do not alter the free energy change of a reaction; they only influence reaction speed.
Activation Energy
- Activation energy (Ea or ΔG✳) is the minimum energy required to initiate a chemical reaction.
- Example: In cellular respiration, 2 ATP are needed to convert glucose into pyruvic acid.
Active Site and Substrate Specificity
- The active site is the part of the enzyme where the catalytic reaction occurs and is specifically shaped to fit its substrates.
- Enzyme-substrate specificity emphasizes that only certain substrates can bind to an enzyme's active site, reminiscent of a "lock and key" model.
Induced Fit Model
- This model suggests that initial interactions between an enzyme and substrate are weak, but these weak bonds induce conformational changes that enhance binding strength.
Factors Affecting Enzyme Activity
- Optimal conditions for enzyme activity include a pH of 6-8 and a temperature range of 30-40 °C.
- Enzyme activity can be influenced by the presence of cofactors, inhibitors, and denaturing conditions.
Cofactors and Coenzymes
- Cofactors are non-protein molecules that assist enzymes in catalysis, which can be permanently or reversibly bound.
- Coenzymes are specific types of organic cofactors, commonly derived from vitamins.
Inhibition Mechanisms
- Competitive inhibitors resemble substrates and compete for the enzyme's active site.
- Noncompetitive inhibitors bind elsewhere on the enzyme, changing its shape and hindering substrate binding or function.
Enzyme Regulation
- Allosteric regulation describes how binding of a molecule affects protein function at a different site, potentially acting as either an inhibitor or activator.
- Cells regulate enzyme activity through various methods including allosteric control, feedback inhibition, and enzyme synthesis regulation at the gene level.
Cooperativity
- Cooperativity occurs when substrate binding to one active site influences the binding of another substrate.
- Positive cooperativity enhances the affinity for subsequent substrate binding, while negative cooperativity decreases it.
Feedback Inhibition
- This cellular control mechanism inhibits an enzyme when its product accumulates to a certain level, maintaining balance within the metabolic pathway.
- Example: Dysregulation of feedback inhibition for insulin can lead to diabetes.
Conclusion
- By regulating enzyme activity effectively, cells can maintain control over metabolic processes, ensuring proper levels of reactants and products.
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