General Biology 1 - 2nd Quarter Reviewer PDF

Summary

This document is a study guide or review document for the 2nd quarter of general biology at an 11th-grade STEM level. It contains information on cell membrane structures, functions, and related processes.

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‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭LESSON #1:‬ ‭‬ h ‭ ydrophilic‬ ‭head‬ ‭(polar)‬ ‭-‬ ‭made‬ ‭up‬ ‭of‬ ‭phosphate‬ ‭❖‬‭STRUCTURES AND FUNCTION...

‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭LESSON #1:‬ ‭‬ h ‭ ydrophilic‬ ‭head‬ ‭(polar)‬ ‭-‬ ‭made‬ ‭up‬ ‭of‬ ‭phosphate‬ ‭❖‬‭STRUCTURES AND FUNCTIONS OF THE‬ ‭CELL MEMBRANE‬ ‭──────────────‬ ‭‬ ‭hydrophobic‬‭tail‬‭(non-polar)‬‭-‬‭made‬‭up‬‭of‬‭fatty‬ ‭acid‬ ‭CELL MEMBRANE‬ ‭II. MOLECULES EMBEDDED IN THE MEMBRANE‬ ‭-‬ t‭ ransportation‬ ‭of‬ ‭water,‬ ‭oxygen,‬ ‭and‬ ‭macromolecules‬ ‭happens‬ ‭inside‬ ‭the‬ ‭cell‬ ‭★‬ ‭CHOLESTEROL‬ ‭membrane‬ -‭ ‬ ‭ omes from 2 sources: the‬‭food we eat‬‭&‬‭liver‬ c ‭-‬ ‭consists‬ ‭of‬ ‭a‬ ‭diversity‬ ‭of‬‭lipids‬‭,‬‭carbohydrates‬‭,‬‭&‬ ‭-‬ ‭maintains‬ ‭fluidity‬ ‭of‬ ‭the‬ ‭cell‬ ‭membrane‬ ‭by‬ ‭proteins‬ ‭reducing‬ ‭phospholipid‬ ‭movement‬ ‭(steroid‬ ‭-‬ ‭it is the primary barrier of the cell‬ ‭cholesterol)‬ ‭-‬ ‭receives information or stimulus‬ ‭-‬ ‭cholesterol‬ ‭and‬ ‭water‬ ‭work‬ ‭together‬ ‭to‬ ‭-‬ ‭allows cell to move and grow‬ ‭maintain fluidity‬ ‭‬ ‭main components are:‬‭water‬‭and‬‭cholesterol‬ ‭‬ ‭structure‬‭is‬‭made‬‭up‬‭of‬‭macromolecules‬‭(except‬ ‭for nucleic acids [DNA & RNA])‬ ‭➔‬ F ‭ LUIDITY‬‭:‬ ‭provides‬ ‭flexibility‬ ‭for‬ ‭cells‬ ‭to‬ ‭move‬ ‭&‬ ‭allows‬ ‭easy‬ ‭incorporation‬ ‭of‬ ‭membrane proteins and phospholipids‬ ‭ ‬ ‭eg.:‬ ‭amoeba‬ ‭(unicellular)‬ ‭moves‬ ‭using‬ ‭its‬ ‭pseudopods,‬‭or‬‭false‬‭feet,‬‭due‬‭to‬‭the‬‭fluidity‬ ‭of its plasma membrane‬ ‭ DL CHOLESTEROL‬‭: can clog the arterial walls‬ L ‭which stops the flow of blood‬ ‭★‬ ‭WATER‬ ‭-‬ ‭maintains viscosity (resistance to flow)‬ ‭-‬ ‭ uid‬‭mosaic‬‭model‬‭describes‬‭the‬‭structure‬‭of‬‭cell‬ fl ‭membrane :‬ ‭★‬ ‭LIPIDS‬ ‭➔‬ ‭phospholipid bilayer‬ ‭-‬ ‭ resence‬ ‭of‬ ‭double‬ ‭bonded‬ ‭fatty‬ ‭acid‬ p ‭➔‬ ‭fluid nature (not too dry/not too watery)‬ ‭(hydrocarbon tails) helps maintain fluidity‬ ‭➔‬ ‭mosaic‬ ‭of‬ ‭proteins,‬ ‭cholesterol,‬ ‭&‬ ‭-‬ ‭unsaturated‬‭,‬ ‭with‬ ‭double‬ ‭bonds,‬ ‭create‬ ‭kinks‬ ‭carbohydrates‬ ‭that‬‭prevent‬‭tight‬‭packing,‬‭enhancing‬‭fluidity‬‭at‬ ‭lower‬ ‭temperatures,‬ ‭while‬ ‭saturated‬‭,‬ ‭have‬ ‭no‬ ‭STRUCTURAL COMPONENTS‬ ‭double‬ ‭bonds,‬ ‭allow‬ ‭for‬ ‭tighter‬ ‭packing,‬ ‭I. PHOSPHOLIPID BILAYER‬ ‭increasing‬ ‭viscosity‬ ‭and‬ ‭reducing‬ ‭fluidity‬ ‭at‬ -‭ ‬ s‭ emi-permeable (not all molecules pass through)‬ ‭higher temperatures.‬ ‭-‬ ‭the‬ ‭aqueous‬ ‭intracellular‬ ‭and‬ ‭extracellular‬ ‭environments‬ ‭favor‬ ‭phospholipid‬ ‭bilayer‬ ‭formation‬ ‭due‬ ‭to‬ ‭hydrophilic‬ ‭heads‬ ‭and‬ ‭hydrophobic tails‬‭arranging to avoid water‬ ‭‬ u ‭ nsaturated hydrocarbon (for fluidity) (good)‬ ‭-‬ ‭kinks‬ ‭push‬ ‭adjacent‬ ‭phospholipids‬ ‭to‬ ‭maintain‬ ‭fluidity at low temperatures‬ ‭‬ ‭saturated hydrocarbon tail (for viscosity) (bad)‬ ‭-‬ ‭straight‬ ‭tails‬ ‭push‬ ‭against‬ ‭each‬ ‭other‬‭making‬ ‭the membrane more viscous and rigid‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭1‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭ ariations‬‭in‬‭membrane‬‭lipid‬‭compositions‬‭across‬ v ‭IV. CARBOHYDRATE CHAINS‬ ‭species‬‭are‬‭evolutionary‬‭adaptations‬‭to‬‭maintain‬ ‭fluidity‬‭in‬‭specific‬‭environments.‬‭(eg.:‬‭cold-water‬ ‭fish‬ ‭have‬ ‭a‬ ‭high‬ ‭proportion‬ ‭of‬ ‭unsaturated‬ ‭hydrocarbon‬ ‭tails‬ ‭in‬ ‭their‬ ‭membranes,‬ ‭allowing‬ ‭them to remain fluid at low temperatures.)‬ ‭-‬ ‭ ercentage‬ ‭of‬ ‭unsaturated‬ ‭phospholipids‬ p ‭increases‬ ‭in‬ ‭autumn‬ ‭to‬ ‭prevent‬ ‭membrane‬ ‭solidification in winter‬ ‭-‬ ‭some‬ ‭bacteria‬ ‭and‬ ‭archaea‬ ‭also‬ ‭adjust‬ ‭their‬ ‭unsaturated‬ ‭phospholipid‬ ‭proportions‬ ‭based‬ ‭on‬ ‭-‬ ‭ arbohydrate‬ ‭chains‬ ‭occur‬ ‭only‬ ‭on‬ ‭the‬‭outside‬ c ‭growing temperature‬ ‭surface‬ ‭of‬ ‭the‬‭lipid‬‭bilayer‬‭or‬‭on‬‭the‬‭peripheral‬ ‭III. MEMBRANE PROTEINS‬ ‭proteins (loosely attached to other proteins)‬ ‭-‬ ‭lipids‬ ‭with‬ ‭the‬ ‭attached‬ ‭carbohydrates‬ ‭chains‬ ‭-‬ f‭ asten adjacent‬ ‭are‬ ‭called‬ ‭glycolipids‬ ‭and‬ ‭proteins‬ ‭with‬ ‭cells together in‬ ‭carbohydrate chains are called‬‭glycoproteins‬ ‭Adhesion‬ ‭animal tissues.‬ ‭-‬ ‭helps‬ ‭cells‬ ‭identify‬ ‭each‬‭other‬‭(e.g.,‬‭in‬‭immune‬ ‭Protein‬ ‭-‬ ‭cell to cell‬ ‭responses‬‭) and recognize harmful cells‬ ‭-‬ ‭assists in communication between cells‬ ‭-‬ ‭recognizes‬ ‭when the body‬ ‭is being‬ ‭invaded by‬ ‭Recognition‬ ‭pathogens so‬ ‭Protein‬ ‭that the‬ ‭necessary‬ ‭-‬ ‭ arbohydrates‬ ‭on‬ ‭the‬ ‭CD4‬‭and‬‭CCR5‬‭receptors‬ c ‭immune‬ ‭help‬‭HIV‬‭attach‬‭to‬‭immune‬‭cells.‬‭changes‬‭in‬‭the‬ ‭response may‬ ‭CCR5‬ ‭receptor,‬ ‭such‬ ‭as‬ ‭the‬ ‭CCR5-Δ32‬ ‭be triggered.‬ ‭mutation‬‭,‬ ‭can‬‭block‬‭HIV‬‭from‬‭binding,‬‭leading‬ ‭to natural resistance to HIV‬ ‭-‬ ‭ ave certain‬ h ‭shapes that‬ ‭CELL MEMBRANE PERMEABILITY‬ ‭allow only‬ -‭ ‬ ‭ ell membranes are selectively permeable‬ c ‭Receptor‬ ‭specific‬ ‭-‬ ‭size‬ ‭and‬ ‭the‬ ‭chemical‬ ‭nature‬ ‭of‬ ‭the‬ ‭molecules‬ ‭Protein‬ ‭molecules to‬ ‭are‬‭important‬‭determiners‬‭of‬‭the‬‭permeability‬‭of‬ ‭bind to them‬ ‭the membrane to certain substances‬ ‭-‬ ‭molecules to‬ ‭cell‬ ‭-‬ ‭channel‬‭(A):‬ ‭form open‬ ‭pores in the‬ ‭membrane,‬ ‭facilitated‬ ‭Transport‬ ‭diffusion‬ ‭Protein‬ ‭-‬ ‭carrier‬‭(B): bind‬ ‭-‬ ‭ olar‬‭and‬‭large‬‭molecules‬‭(glucose‬‭&‬‭ions)‬‭:‬‭need‬ p ‭to a specific‬ ‭help‬ ‭to‬ ‭cross‬ ‭the‬ ‭membrane‬ ‭(facilitated‬ ‭substance,‬ ‭undergo a‬ ‭diffusion)‬ ‭shape change‬ ‭-‬ ‭small,‬ ‭non-charged‬ ‭molecules‬ ‭(molecules)‬‭:‬ ‭can‬ ‭pass‬ ‭freely‬ ‭through‬ ‭the‬ ‭membrane‬ ‭(simple‬ ‭diffusion)‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭2‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭CONCENTRATION GRADIENT‬ ‭LESSON #2:‬ ‭-‬ r‭ efers‬‭to‬‭the‬‭difference‬‭in‬‭the‬‭concentration‬‭of‬‭a‬ ‭❖‬‭CELL’S‬ ‭TRANSPORT‬ ‭MECHANISM‬ ‭I:‬ ‭substance‬ ‭across‬‭the‬‭membrane‬‭(some‬‭areas‬‭of‬ ‭DIFFUSION & OSMOSIS‬ ‭──────────‬ ‭— PASSIVE TRANSPORT—‬ ‭the‬ ‭cell‬ ‭membrane‬ ‭have‬ ‭low‬ ‭while‬ ‭other‬ ‭have‬ ‭high concentration)‬ ‭DIFFUSION‬ ‭-‬ ‭molecules‬ ‭naturally‬ ‭move‬ ‭from‬ ‭an‬ ‭area‬ ‭of‬‭high‬ ‭-‬ i‭nvolves‬ ‭the‬ ‭movement‬ ‭of‬ ‭molecules‬ ‭(such‬ ‭as‬ ‭concentration‬ ‭to‬ ‭low‬ ‭concentration‬ ‭through‬ ‭solutes)‬ ‭in‬ ‭a‬ ‭solvent‬ ‭from‬ ‭an‬ ‭area‬ ‭of‬ ‭higher‬ ‭diffusion‬ ‭concentration‬ ‭of‬ ‭the‬‭solute‬‭to‬‭an‬‭area‬‭of‬‭lower‬ ‭— TYPES OF TRANSPORT —‬ ‭concentration‬‭which results‬‭equilibrium‬ ‭I. SIMPLE DIFFUSION‬ -‭ ‬ ‭ oesn’t need a transport protein‬ d ‭-‬ ‭movement‬‭of‬‭small,‬‭non-polar‬‭molecules‬‭directly‬ ‭through the cell membrane (eg.:‬‭O₂‬‭,‬‭CO₂‬‭)‬ ‭II. FACILITATED DIFFUSION‬ -‭ ‬ r‭ equires channel protein‬ ‭ACTIVE TRANSPORT‬ ‭-‬ ‭helps‬ ‭larger‬ ‭or‬‭polar‬‭molecules‬‭move‬‭across‬‭the‬ ‭-‬ ‭works‬ ‭when‬ ‭membrane‬ ‭is‬ ‭impermeable‬ ‭to‬ ‭a‬ ‭cell‬ ‭membrane‬ ‭through‬ ‭transport‬ ‭proteins‬ ‭(eg.:‬ s‭ ubstance‬ ‭ions, water [aquaporins for water])‬ -‭ ‬ ‭requires energy (usually ATP)‬ ‭-‬ ‭moves against the gradient (‬‭low to high‬‭)‬ ‭-‬ ‭usually ions and larger molecules pass through‬ ‭OSMOSIS‬ ‭-‬ o ‭ smosis‬ ‭refers‬ ‭to‬ ‭the‬ ‭movement‬ ‭of‬ ‭water‬ ‭from‬ ‭PASSIVE TRANSPORT‬ ‭higher to lower concentration‬ ‭-‬ ‭ orks when membrane is‬‭permeable‬‭to a‬ w ‭-‬ ‭balance‬ ‭the‬ ‭solute‬‭concentrations‬‭on‬‭both‬‭sides‬ ‭substance‬ ‭of the membrane.‬ -‭ ‬ ‭doesn’t require energy‬ ‭-‬ ‭ensures‬ ‭the‬ ‭amount‬‭of‬‭water‬‭inside‬‭and‬‭outside‬ ‭-‬ ‭follows the gradient (‬‭high to low‬‭)‬ ‭the‬ ‭cell‬ ‭is‬ ‭balanced‬ ‭relative‬ ‭to‬ ‭the‬ ‭solutes‬ ‭-‬ ‭smaller molecules pass through‬ ‭present‬ ‭lesson 1 — end‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭3‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭TONICITY‬ ‭LESSON #3:‬ ‭-‬ ‭ etermines‬‭whether‬‭water‬‭will‬‭enter‬‭or‬‭leave‬‭the‬ d ‭❖‬‭CELL’S‬ ‭TRANSPORT‬ ‭MECHANISM‬ ‭II:‬ ‭cell,‬‭and‬‭it‬‭is‬‭essential‬‭for‬‭maintaining‬‭cell‬‭shape‬ ‭ACTIVE AND FACILITATED TRANSPORT‬ ‭— ACTIVE TRANSPORT—‬ ‭and‬‭function‬ ‭-‬ t‭ ransporting‬ ‭substances‬ ‭against‬ ‭the‬ -‭ ‬ ‭depends on the concentration of solutes in fluids‬ ‭concentration‬ ‭gradient‬ ‭is‬ ‭essential‬ ‭for‬ ‭-‬ ‭ability of a surrounding solution to cause a cell‬ ‭maintaining‬ ‭cellular‬ ‭homeostasis‬‭,‬ ‭nutrient‬ ‭to gain or lose water‬ ‭uptake‬‭, and‬‭waste removal‬ ‭— ANIMAL CELLS —‬ ‭-‬ ‭have‬ ‭a‬ ‭relatively‬ ‭large‬‭number‬‭of‬‭mitochondria.‬ ‭–‬‭solute outside =‬ ‭evident‬ ‭and‬ ‭important‬ ‭in‬ ‭muscle‬ ‭cells‬ ‭(to‬ ‭solute inside‬ ‭contract‬ ‭and‬‭relax‬‭properly)‬‭and‬‭nerve‬‭cells‬‭(to‬ ‭–‬‭cell remains stable‬ ‭transmit‬ ‭electrical‬ ‭signals‬ ‭effectively)‬ ‭of‬ ‭the‬ ‭Isotonic‬ ‭(undisturbed)‬ ‭body‬ ‭–‬‭water molecules‬ ‭move at the same‬ ‭rate in both‬ ‭directions‬ ‭–‬‭solute outside ‬ ‭change, cells can produce‬‭electrical signals‬ ‭solute inside‬ ‭— ORDER OF PUMPING —‬ ‭–‬‭has higher solute‬ ‭-‬ ‭three molecules‬ ‭Hypertonic‬ ‭concentration and‬ ‭ f sodium of the‬ o ‭has lower water‬ ‭same sizes bind‬ ‭concentration‬ ‭I. Adhesion‬ ‭together and will‬ ‭–‬‭can cause an‬ ‭undergo‬ ‭animal cell to shrink‬ ‭reshaping to‬ ‭or shrivel due to‬ ‭move freely‬ ‭water loss‬ ‭— PLANT CELLS —‬ ‭-‬ ‭phosphate from‬ ‭an ATP molecule is‬ ‭added to the‬ ‭II. Carrier‬ ‭carrier protein,‬ ‭changing its shape‬ ‭which allows the‬ ‭movement of‬ ‭sodium ions‬ ‭-‬ ‭the new shaped‬ ‭-‬ ‭ lant‬ ‭cells,‬ ‭relative‬ ‭to‬ ‭animal‬ c p ‭ ells,‬ d ‭ o‬ ‭not‬ ‭sodium is‬ ‭change‬ ‭cell‬ ‭size‬ ‭that‬ ‭much‬ ‭with‬ ‭varying‬ ‭III.‬ ‭compatible with‬ ‭concentrations of water‬ ‭Receptor‬ ‭picking up two‬ ‭potassium ions,‬ ‭lesson 2 — end‬ ‭which bind to their‬ ‭respective sites‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭4‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭-‬ ‭ s the phosphate‬ a ‭added from ATP‬ ‭previously leaves,‬ ‭the carrier protein‬ ‭IV. Carrier‬ ‭assumes its original‬ ‭shape, and the two‬ ‭potassium ions are‬ ‭released inside the‬ ‭cell‬ ‭01.‬ ‭BUDDING‬ ‭II. CALCIUM PUMP‬ ‭-‬ ‭membrane‬ ‭begins‬ ‭to‬ ‭coat‬ ‭and‬ ‭form‬ ‭a‬ ‭pocket‬ ‭-‬ ‭ owered‬‭by‬‭ATP,‬‭it‬‭pumps‬‭calcium‬‭ions‬‭back‬‭into‬ p ‭containing‬ ‭cargo‬ ‭materials,‬ ‭assisted‬ ‭by‬ ‭coating‬ ‭the‬‭sarcoplasmic‬‭reticulum,‬‭reducing‬‭the‬‭calcium‬ ‭proteins‬ ‭level and allowing the muscle to relax‬ ‭02.‬ ‭SCISSION‬ ‭-‬ ‭constantly‬‭work‬‭to‬‭reduce‬‭the‬‭amount‬‭of‬‭calcium‬ ‭-‬ ‭scission‬ ‭proteins‬ ‭help‬‭release‬‭the‬‭coated‬‭vesicle‬ ‭to very low levels, preparing the cell‬ ‭containing the selected material‬ ‭03.‬ ‭UNCOATING‬ ‭-‬ ‭protein‬ ‭coat‬ ‭that‬ ‭helped‬ ‭form‬ ‭the‬ ‭vesicle‬ ‭is‬ ‭removed, preparing it for transport‬ ‭04.‬‭TRANSLOCATION‬ ‭-‬ ‭vesicle‬ ‭moves‬ ‭through‬ ‭the‬ ‭cytoplasm,‬ ‭often‬ ‭along cytoskeletal tracks, toward its destination‬ ‭05.‬ ‭TETHERING‬ ‭-‬ ‭ alcium‬ ‭ions‬ ‭must‬ ‭be‬ ‭maintained‬ ‭at‬ ‭low‬ c -‭ ‬ ‭determine whether it is a correct target‬ ‭concentrations‬ ‭inside‬ ‭the‬ ‭cell.‬ ‭This‬ ‭is‬ ‭-‬ ‭vesicle‬ ‭is‬ ‭captured‬ ‭and‬ ‭held‬ ‭near‬ ‭its‬ ‭target‬ ‭essential‬‭for‬‭the‬‭proteins‬‭in‬‭cells‬‭to‬‭function‬ ‭membrane by tethering proteins‬ ‭normally‬ ‭06.‬ ‭FUSION‬ ‭-‬ ‭calcium‬ ‭pumps‬ ‭do‬ ‭not‬ ‭need‬ ‭binding‬ ‭to‬ ‭a‬ ‭-‬ ‭vesicle‬ ‭will‬‭move‬‭closer‬‭to‬‭the‬‭target‬‭membrane‬ ‭second‬‭ion‬‭for‬‭the‬‭protein‬‭pump‬‭to‬‭return‬‭to‬ ‭its‬ ‭original‬ ‭shape.‬ ‭It‬ ‭simply‬ ‭binds‬ ‭to‬ ‭the‬ ‭for fusion‬ ‭calcium ions and pumps them out of the cell‬ ‭-‬ ‭vesicle‬ ‭delivers‬ ‭its‬ ‭membrane‬ ‭components‬ ‭then‬ ‭it physically fuses with the target membrane‬ ‭BULK/VESICULAR TRANSPORT‬ ‭— TYPES OF VESICULAR TRANSPORT —‬ ‭-‬ ‭cells‬ ‭are‬ ‭able‬ ‭to‬ ‭transport‬ ‭large‬ ‭molecules‬ ‭I. EXOCYTOSIS‬ t‭ hrough vesicles‬ ‭★‬ ‭VESICLES‬ ‭-‬ ‭ ses‬ ‭intracellular‬ ‭vesicles‬ ‭and‬ ‭is‬ ‭for‬ ‭hormones‬‭,‬ u -‭ ‬ ‭are‬ ‭structures‬ ‭within‬ ‭or‬ ‭neurotransmitters‬‭,‬ ‭outside‬ ‭a‬ ‭cell,‬ ‭consisting‬ ‭digestive enzymes‬ ‭of‬ ‭a‬ ‭cytoplasm‬ ‭and‬ ‭-‬ ‭molecules‬ ‭from‬ ‭the‬ ‭cell‬ ‭enclosed by a lipid bilayer‬ ‭being‬ ‭transported‬ ‭-‬ ‭are‬ ‭formed‬ ‭naturally‬ ‭outside‬ ‭the‬ ‭cell‬ ‭through‬ ‭during‬ ‭the‬ ‭process‬ ‭of‬ ‭transport‬ ‭vesicle‬ ‭that‬ ‭secretion, uptake, and transport of molecules‬ ‭fuses‬ ‭with‬ ‭the‬ ‭plasma‬ ‭-‬ ‭golgi‬‭body‬‭often‬‭produces‬‭the‬‭vesicles‬‭that‬‭carry‬ ‭membrane‬ ‭these cell products to the membrane‬ ‭-‬ ‭golgi‬ ‭body‬ ‭is‬ ‭involved‬ ‭because‬ ‭it‬ ‭receives‬ ‭and‬ ‭-‬ ‭30-1000 nanometer in diameter (varies in sizes)‬ ‭modifies‬ ‭proteins‬ ‭and‬ ‭lipids‬ ‭from‬ ‭the‬ ‭‬ ‭intracellular‬ ‭vesicle‬ ‭—‬ ‭membrane-bound‬ ‭endoplasmic‬‭reticulum,‬‭then‬‭packages‬‭them‬‭into‬ ‭structures‬ ‭within‬ ‭cells‬‭that‬‭transport‬‭substances‬ ‭secretory vesicles for cellular export‬ ‭and‬ ‭facilitate‬ ‭processes‬ ‭like‬ ‭protein‬ ‭transport‬ ‭-‬ ‭lysosome can also be involved‬ ‭and signaling‬ ‭‬ ‭extracellular‬‭vesicle‬‭—‬‭particles‬‭released‬‭into‬‭the‬ ‭extracellular‬ ‭space‬ ‭that‬ ‭mediate‬ ‭intercellular‬ ‭communication and carry various biomolecules‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭5‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭-‬ t‭ ransports‬ ‭ eceptor-‬ R ‭ ‬‭involves the‬ – ‭molecules‬ ‭Mediated‬ ‭regulation of‬ ‭–‬‭uses a‬ ‭outside the cell‬ ‭molecules into‬ ‭receptor protein‬ ‭Constitutive‬ ‭through vesicles‬ ‭the cell‬ ‭to recognize‬ ‭-‬ ‭transports‬ ‭–‬‭involved in‬ ‭compatible‬ ‭molecules‬ ‭the uptake,‬ ‭molecules which‬ ‭outside the cell‬ ‭transfer, and‬ ‭they bring into‬ ‭then the vesicle‬ ‭exchange of‬ ‭the cell‬ ‭fuses with the‬ ‭substances‬ ‭plasma‬ ‭between cells‬ ‭membrane‬ ‭-‬ ‭transports‬ ‭ olecules outside‬ m ‭Regulated‬ ‭the cell because of‬ ‭triggered signals‬ ‭II. ENDOCYTOSIS‬ ‭-‬ ‭ oves‬ ‭particles,‬ ‭such‬ ‭as‬ ‭large‬ ‭molecules,‬ ‭parts‬ m ‭of‬ ‭cells,‬ ‭and‬ ‭even‬ ‭FACILITATED TRANSPORT‬ ‭whole‬ ‭cells,‬ ‭into‬ ‭a‬ ‭-‬ ‭ ovement‬ m ‭of‬ ‭molecules‬ ‭down‬ ‭their‬ ‭cell‬ ‭concentration‬ ‭gradient,‬ ‭but‬ ‭with‬ ‭the‬ ‭aid‬ ‭of‬ ‭-‬ ‭molecules‬ ‭being‬ ‭membrane‬ ‭transport‬ ‭proteins‬ ‭(high‬ ‭to‬ ‭low‬ ‭but‬ ‭transported‬‭into‬‭the‬ ‭still requires energy)‬ ‭cell‬ ‭through‬ ‭-‬ ‭can‬ ‭either‬ ‭be‬ ‭carrier‬ ‭proteins‬ ‭(also‬ ‭called‬ ‭transport‬ ‭vesicle‬ ‭that‬ ‭buds‬ ‭inward‬ ‭from‬ ‭the‬ ‭transporters) or channel proteins‬ ‭plasma membrane‬ ‭I. GLUCOSE TRANSPORTERS (CARRIER)‬ ‭–‬‭“cell-eating”‬ ‭ ‬‭involves‬ – ‭-‬ f‭ ound‬ ‭at‬ ‭the‬ ‭base‬ ‭of‬ ‭the‬ ‭epithelial‬ ‭cells‬ ‭of‬ ‭the‬ ‭(solid‬ ‭engulfing and‬ ‭intestines‬ ‭Phagocytosis‬ ‭molecules)‬ ‭packing‬ ‭-‬ ‭carriers‬ ‭that‬ ‭supply‬ ‭glucose‬ ‭molecules‬ ‭to‬ ‭the‬ ‭through‬ ‭underlying tissues and into the bloodstream‬ ‭–‬‭functions as a‬ ‭vacuoles‬ ‭defense and‬ ‭repair for the‬ ‭–‬‭vacuole fuses‬ ‭human body‬ ‭with lysosome‬ ‭– only one‬ ‭and the‬ ‭molecule‬ ‭ olecule will be‬ m ‭digested‬ ‭ 1.‬ ‭BINDING‬ 0 ‭-‬ ‭glucose‬ ‭molecule‬ ‭(in‬‭blue)‬‭outside‬‭the‬‭cell‬‭binds‬ ‭ ‬‭occurs when‬ – ‭to‬ ‭a‬ ‭specific‬ ‭site‬ ‭on‬ ‭a‬ ‭glucose‬ ‭transporter‬ ‭vesicles form‬ ‭protein embedded in the cell membrane‬ ‭Pinocytosis‬ ‭around a liquid‬ ‭02.‬ ‭CONFORMATIONAL CHANGE‬ ‭–‬‭“cell-drinking”‬ ‭or around very‬ ‭-‬ ‭transporter‬ ‭protein‬ ‭to‬ ‭change‬ ‭its‬ ‭shape.‬ ‭This‬ ‭(fluid)‬ ‭small particles‬ ‭opens‬ ‭the‬ ‭transporter‬ ‭to‬ ‭the‬ ‭other‬ ‭side‬ ‭of‬ ‭the‬ ‭membrane, allowing glucose to pass through‬ ‭–‬‭functions for‬ ‭–‬‭smaller‬ ‭ingestion‬ ‭ esicle and the‬ v ‭03.‬ ‭RELEASE‬ ‭vesicle does not‬ ‭-‬ ‭glucose‬ ‭molecule‬ ‭is‬ ‭released‬ ‭into‬ ‭the‬ ‭cytosol‬ ‭need to merge‬ ‭(inside‬ ‭the‬ ‭cell),‬ ‭moving‬ ‭down‬ ‭its‬ ‭concentration‬ ‭with a lysosome‬ ‭gradient‬‭(from‬‭high‬‭concentration‬‭outside‬‭to‬‭low‬ ‭concentration inside)‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭6‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭II. ION CHANNELS (CHANNEL)‬ ‭CLASSIFICATION‬ ‭-‬ ‭ hannel‬ ‭contains‬ ‭a‬ ‭selectivity‬ ‭filter‬ ‭that‬ ‭only‬ c ‭MONOSACCHARIDES‬ ‭allows‬ ‭certain‬ ‭types‬ ‭of‬ ‭ions‬ ‭to‬ ‭pass‬ ‭through‬ -‭ ‬ s‭ imple sugar,‬‭one‬ ‭based‬ ‭on‬ ‭their‬ ‭size‬ ‭and‬ ‭charge,‬ ‭ensuring‬ ‭that‬ ‭-‬ ‭fundamental‬‭units‬‭of‬‭carbohydrates‬‭that‬‭cant‬‭be‬ ‭only‬ ‭specific‬ ‭ions‬ ‭(like‬ ‭Na⁺,‬ ‭K⁺,‬ ‭or‬ ‭Cl⁻)‬ ‭can‬ ‭flow‬ ‭broken down or hydrolyzed into smaller sugars‬ ‭through‬ ‭-‬ ‭cell‬‭maintains‬‭relatively‬‭different‬‭concentrations‬ ‭–‬‭sugar units that‬ ‭of ions inside and outside the cell‬ ‭contain an‬ ‭aldehyde group‬ ‭-‬ ‭sodium,‬ ‭potassium,‬ ‭and‬ ‭chloride‬ ‭ions,‬ ‭are‬ ‭Aldose‬ ‭(shown in blue)‬ ‭essential‬ ‭in‬ ‭modifying‬ ‭the‬ ‭charge‬ ‭of‬ ‭the‬ ‭cell’s‬ ‭interior‬ ‭ ‬‭carbonyl group is‬ – ‭-‬ ‭sodium-potassium‬ ‭pump‬ ‭helps‬ ‭restore‬ ‭the‬ ‭at the beginning of‬ ‭concentration‬ ‭of‬ ‭sodium‬ ‭and‬ ‭potassium‬ ‭ions‬ ‭the chain‬ ‭outside‬ ‭and‬ ‭inside‬ ‭the‬ ‭cell,‬ ‭respectively.‬ ‭As‬ ‭mentioned,‬ ‭these‬ ‭channels‬ ‭are‬ ‭not‬ ‭normally‬ ‭ ‬‭sugar units that‬ – ‭open, thus they are said to be gated‬ ‭contain a ketone‬ ‭Ketose‬ ‭group (shown in‬ ‭blue)‬ ‭–‬‭carbonyl group is‬ ‭inside the chain‬ ‭lesson 3 — end‬ ‭— TYPES OF MONOSACCHARIDE —‬ ★ ‭ ‬ G ‭ LUCOSE‬ ‭LESSON #4:‬ ‭-‬ ‭also‬ ‭known‬ ‭as‬ ‭dextrose,‬ ‭is‬ ‭the‬ ‭form‬ ‭that‬ ‭❖‬‭CARBOHYDRATES‬‭─────────────‬ ‭circulates in our bloodstream‬ -‭ ‬ s‭ ource of energy‬ ‭-‬ ‭monomer:‬‭monosaccharide/simple sugar‬ ★ ‭ ‬ ‭FRUCTOSE‬ ‭-‬ ‭occurs‬‭in‬‭ripe‬‭and‬‭sweet‬‭fruits,‬‭such‬‭as‬‭mangoes,‬ ‭-‬ ‭organic‬ ‭compounds‬ ‭that‬ ‭consists‬ ‭of‬ ‭carbon,‬ ‭the sweetest fruit on the planet‬ ‭hydrogen, oxygen‬‭(1:2:1 ratio)‬ ‭-‬ ‭overconsumption‬ ‭of‬ ‭carbohydrates‬ ‭may‬ ‭lead‬‭to‬ ★ ‭ ‬ ‭GALACTOSE‬ ‭-‬ ‭makes up the sugar in milk‬ ‭obesity or diabetes‬ ‭ ‬ ‭e.g.: bread, cell walls (chitin & cellulose)‬ ★ ‭ ‬ ‭DEOXYRIBOSE‬ ‭-‬ ‭a‬ ‭pentose‬‭,‬ ‭is‬ ‭a‬ ‭major‬ ‭structural‬ ‭component‬ ‭of‬ ‭STRUCTURES‬ ‭DNA nucleotides‬ ★ ‭ ‬ L ‭ INEAR FORM‬ ‭-‬ ‭carbonyl‬ ‭group‬ ‭only‬ ‭(‬‭CO‬‭-‬ ‭OLIGOSACCHARIDES‬ ‭aldehyde)‬ -‭ ‬ t‭ wo to ten units of monosaccharides‬ ‭-‬ ‭most‬ ‭commonly‬ ‭occurring‬ ‭forms‬ ‭of‬ ★ ‭ ‬ P‭ YRANOSE RING‬ ‭oligosaccharides are disaccharides (di = two)‬ ‭-‬ ‭monosaccharides‬‭with‬‭five‬‭to‬‭six‬ ‭-‬ ‭disaccharides‬ ‭are‬ ‭formed‬ ‭by‬ ‭dehydration‬ ‭carbon‬ ‭atoms‬ ‭in‬ ‭aqueous‬ ‭synthesis‬ ‭solutions‬ ‭-‬ ‭hydroxyl‬ ‭group‬ ‭(‬‭OH‬‭)‬ ‭and‬ ‭carbonyl group interacting‬ ‭‬ ‭alpha glucose‬‭-‬‭OH‬‭is below‬ ‭‬ ‭beta glucose‬‭-‬‭OH‬‭is above‬ ‭ ‬ a ‭ lso‬ ‭known‬ ‭as‬ ‭condensation‬ ‭reaction‬‭,‬ ‭occurs‬ ‭when‬ ‭the‬ ‭hydroxyl‬ ‭group‬ ‭(shown‬ ‭in‬ ‭red)‬ ‭of‬ ‭glucose‬ ‭combines‬ ‭with‬ ‭the‬ ‭hydrogen‬ ‭(shown‬ ‭in‬ ‭red) of fructose‬ ‭ ‬ ‭two‬ ‭molecules‬ ‭or‬ ‭parts‬ ‭of‬ ‭the‬ ‭same‬ ‭molecule‬ ‭combine and one molecule of water is lost‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭7‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭ ‬ g ‭ lycosidic‬ ‭bonds‬ ‭are‬ ‭formed‬ ‭between‬ ‭the‬ ‭LESSON #5:‬ ‭monosaccharides‬ ‭❖‬‭PROTEIN‬ ‭───────────────────‬ ‭— TYPES OF DISACCHARIDE—‬ ‭-‬ ‭ iological‬ ‭compounds‬ ‭composed‬ ‭of‬ ‭chains‬ ‭of‬ b ★ ‭ ‬ ‭SUCROSE‬ ‭amino acid‬‭monomers‬ ‭-‬ ‭in‬ ‭plants,‬ ‭it‬ ‭is‬ ‭abundant‬ ‭in‬ ‭sugarcane,‬ ‭which‬ ‭is‬ ‭-‬ ‭helps‬ ‭us‬ ‭grow‬ ‭faster‬ ‭and‬ ‭processed to produce table sugar‬ ‭stronger‬ ★ ‭ ‬ ‭MALTOSE‬ ‭-‬ ‭amino‬ ‭acids‬ ‭have:‬ ‭central‬ ‭-‬ ‭in‬ ‭barley,‬ ‭it‬ ‭can‬ ‭be‬ ‭fermented‬ ‭to‬ ‭produce‬ ‭carbon‬‭,‬ ‭amino‬ ‭group‬ ‭alcoholic beverages‬ ‭(NH2),‬ ‭carboxyl‬ ‭group‬ ★ ‭ ‬ ‭LACTOSE‬ ‭(COOH),‬ ‭hydrogen‬ ‭atom,‬ ‭-‬ ‭major sugar found in cow’s milk‬ ‭and‬ ‭r‬ ‭group‬ ‭(fundamental‬ ★ ‭ ‬ ‭RAFFINOSE‬ ‭structure)‬ ‭-‬ ‭a‬ ‭trisaccharide,‬ ‭is‬ ‭found‬ ‭in‬ ‭cabbages‬ ‭and‬ ‭R GROUP‬ ‭asparagus‬ ‭NON-POLAR GROUP‬ -‭ ‬ t‭ wo types are:‬‭aliphatic‬‭&‬‭aromatic‬ ‭-‬ ‭difference are in their structures only‬ ‭Aliphatic‬ ‭Aromatic‬ ‭–‬‭straight or branched‬ ‭–‬‭ring with double‬ ‭chains of carbon and‬ ‭bonds‬ ‭hydrogen‬ ‭–‬‭generally cannot form‬ ‭–‬‭some can form‬ ‭hydrogen bonds with‬ ‭ ydrogen bonds (e.g.‬ h ‭water‬ ‭with hydroxyl group)‬ ‭–‬‭less reactive due to‬ ‭POLYSACCHARIDES‬ ‭simpler structure‬ ‭–‬‭may participate in‬ ‭interactions‬ ‭-‬ ‭ omposed‬ c ‭of‬ ‭very‬ ‭long‬ ‭chains‬ ‭of‬ ‭monosaccharides‬ ‭-‬ ‭orientation‬ ‭of‬ ‭bonds‬ ‭and‬ ‭the‬ ‭presence‬ ‭of‬ ‭branching determine their properties‬ ‭-‬ ‭most‬ ‭common‬ ‭polysaccharides‬ ‭are‬ ‭cellulose,‬ ‭chitin, starch, and glycogen‬ ‭ ‬‭primary storage‬ – ‭POLAR & UNCHARGED GROUP‬ ‭Starch‬ ‭polysaccharide in‬ ‭-‬ t‭ wenty amino acids in‬ ‭plants‬ ‭living organisms have‬ ‭different R groups‬ ‭–‬‭storage‬ ‭(highlighted in blue),‬ ‭ olysaccharide in‬ p ‭which give them varying‬ ‭Glycogen‬ ‭animal and fungal‬ ‭chemical properties in the‬ ‭cells‬ ‭cell's physiological‬ ‭conditions‬ ‭–‬ ‭major component‬ ‭of plant cell walls,‬ -‭ ‬ ‭ 0 amino acids are found in human protein‬ 2 ‭Cellulose‬ ‭which makes it the‬ ‭-‬ ‭9 have to be supplied by the food and are also‬ ‭(Fiber)‬ ‭primary structural‬ ‭called essential amino acids‬ ‭carbohydrate in‬ ‭plants‬ ‭-‬ ‭8 conditional amino acids and 3 non-essential‬ ‭ ‬ ‭bond‬ ‭between‬ ‭adjacent‬ ‭amino‬ ‭acids‬ ‭is‬ ‭called‬ ‭a‬ ‭peptide bond‬ ‭lesson 4 — end‬ ‭ ‬ ‭cells‬ ‭link‬ ‭amino‬ ‭acid‬ ‭monomers‬ ‭together‬ ‭by‬ ‭dehydration reactions‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭8‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭LEVELS OF PROTEIN STRUCTURE‬ ‭PROTEIN DENATURATION‬ ‭-‬ ‭ appens‬ ‭when‬ ‭protein‬ ‭structure‬ ‭is‬ ‭changed‬ ‭or‬ h ‭PRIMARY‬ ‭destroyed‬ -‭ ‬ l‭ong chain‬ ‭-‬ ‭some‬ ‭conditions‬ ‭can‬ ‭cause‬ ‭a‬ ‭protein‬‭to‬‭unravel‬ ‭-‬ ‭refers to the unique‬ ‭and‬ ‭lose‬ ‭its‬ ‭normal‬ ‭shape‬ ‭(e.g.:‬ ‭pH‬ ‭and‬ ‭sequence of amino‬ ‭temperature)‬ ‭acids‬ ‭-‬ ‭the‬ ‭change‬ ‭in‬ ‭the‬ ‭appearance‬ ‭and‬ ‭chemical‬ ‭➔‬ ‭bonding:‬ ‭peptide‬ ‭composition‬ ‭of‬ ‭an‬ ‭egg‬‭once‬‭cooked‬‭is‬‭primarily‬ ‭bonds‬ ‭between‬ ‭because of‬‭protein denaturation‬ ‭amino acids‬ ‭FUNCTIONAL CLASSIFICATIONS‬ ‭➔‬ ‭e.g.:‬‭sequence of amino acids in insulin‬ ‭STRUCTURAL PROTEINS‬ ‭SECONDARY‬ ‭-‬ ‭ eratin‬ ‭in‬ ‭hair‬ ‭and‬ ‭silk‬ ‭in‬ ‭spider‬ ‭webs‬ ‭are‬ k ‭-‬ ‭ oiled as chain that‬ c ‭examples of structural proteins‬ ‭becomes longer‬ ‭-‬ ‭keratin‬ ‭can‬ ‭also‬ ‭be‬ ‭found‬ ‭in‬ ‭the‬ ‭horns,‬ ‭claws,‬ -‭ ‬ ‭include the alpha-helices‬ ‭hooves, and outer skin of vertebrates‬ ‭and beta-sheets, which‬ ‭ENZYMES‬ ‭resulted from amino acid‬ ‭-‬ ‭ ostly‬ ‭globular‬ m ‭chain coiling or folding‬ ‭proteins‬ ‭that‬ ‭➔‬ ‭bonding:‬ ‭hydrogen‬ ‭catalyze‬‭reactions‬ ‭bonds between backbone atoms‬ ‭without‬ ‭being‬ ‭➔‬ ‭e.g.:‬‭a-helix in keratin & b-helix in fibroin‬ ‭used‬ ‭up‬ ‭in‬ ‭the‬ ‭TERTIARY‬ ‭process‬ ‭-‬ f‭ orms a 3D‬ ‭-‬ ‭very‬ ‭specific‬ ‭to‬ ‭structure/model‬ ‭the‬ ‭substrate‬ ‭molecule‬ ‭or‬ ‭reactants,‬ ‭the‬ -‭ ‬ ‭formed and‬ ‭reactions of which are catalyzed‬ ‭maintained by‬ ‭TRANSPORT PROTEINS‬ ‭hydrophobic,‬ ‭-‬ ‭ hannel‬‭and‬‭carrier‬‭proteins‬‭allow‬‭the‬‭movement‬ c ‭hydrophilic, and‬ ‭of different molecules across the cell membrane‬ ‭ionic‬ ‭interactions, as well as by disulfide bridges‬ ‭IMMUNE PROTEINS‬ ‭➔‬ ‭bonding:‬ ‭hydrogen‬ ‭bonds,‬ ‭ionic‬ ‭bonds,‬ ‭hydrophobic interactions‬ ‭➔‬ ‭e.g.:‬‭enzyme structure (e.g.: lysosome)‬ -‭ ‬ ‭interactions‬ ‭between‬ ‭antigens‬‭and‬‭antibodies‬‭help‬ ‭QUATERNARY‬ ‭trigger immune responses‬ ‭-‬ ‭ ombination of all‬ c ‭structures‬ ‭-‬ ‭hemoglobin‬‭is an‬ ‭example of a protein‬ ‭CHEMICAL MESSENGERS‬ ‭that can attain a‬ ‭-‬ i‭nsulin‬ ‭consists‬ ‭of‬ ‭two‬ ‭amino‬ ‭acid‬ ‭chains‬ ‭quaternary structure.‬ ‭connected‬ ‭by‬ ‭disulfide‬ ‭bridges‬ ‭(in‬ ‭yellow‬ ‭color)‬ ‭It has four‬ ‭between cysteine residues‬ ‭polypeptides, wherein‬ ‭CONTRACTILE PROTEINS‬ ‭each has primary,‬ ‭-‬ ‭ ontractile‬ ‭proteins‬ ‭are‬ ‭present‬ ‭in‬ ‭muscle‬ ‭cells,‬ c ‭secondary and tertiary structures‬ ‭which‬‭helps‬‭the‬‭body‬‭to‬‭initiate‬‭various‬‭forms‬‭of‬ ‭➔‬ ‭bonding:‬ ‭hydrogen‬ ‭bonds,‬ ‭ionic‬ b ‭ onds,‬ ‭movements‬ ‭hydrophobic interactions‬ ‭➔‬ ‭e.g.:‬‭hemoglobin, antibodies, collagen‬ ‭STORAGE PROTEINS‬ ‭-‬ ‭ rovide‬ ‭amino‬ ‭acids‬ ‭for‬ ‭growing‬ o p ‭ rganisms,‬ ‭-‬ ‭ mino‬ ‭acids‬ ‭joined‬‭by‬‭peptide‬‭bonds‬‭is‬‭called‬‭a‬ a ‭such‬ ‭as‬ ‭germinating‬ ‭seeds‬ ‭and‬ ‭developing‬ ‭polypeptide‬ ‭embryos in eggs‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭9‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭PROTEIN DIGESTION AND ABSORPTION‬ ‭—‬‭Saturated‬‭—‬ ‭-‬ ‭ roteins‬ ‭are‬ ‭digested‬ ‭by‬ ‭proteases,‬ ‭and‬ ‭amino‬ p ‭acids are absorbed actively‬ ‭-‬ ‭involves‬ ‭various‬ ‭enzymes‬ ‭produced‬ ‭by‬ ‭the‬ ‭stomach,‬ ‭pancreas,‬ ‭and‬ ‭ ‬ ‭have‬ ‭no‬ ‭double‬ ‭bonds‬ ‭in‬ ‭their‬ ‭hydrocarbon‬ – ‭small intestine‬ ‭chains which gives them a straight-chain‬ ‭-‬ ‭after‬ ‭absorption,‬ ‭–‬‭many hydrogen atoms as possible‬ ‭amino‬ ‭acids‬ ‭are‬ ‭➔‬ ‭solid‬ ‭at‬ ‭room‬ ‭temperature‬ ‭(e.g.:‬ ‭animal‬ ‭transported‬ ‭to‬ ‭the‬ ‭fats such as lard and butter)‬ ‭liver‬ ‭and‬ ‭other‬ ‭—‬‭Unsaturated‬‭—‬ ‭body‬ ‭tissues‬ ‭for‬ ‭further metabolism‬ ‭-‬ ‭one‬ ‭byproduct‬ ‭of‬ ‭amino‬ ‭acid‬ ‭metabolism‬ ‭is‬ ‭ammonium,‬‭the‬‭urea‬‭cycle‬‭in‬‭the‬‭liver‬‭allows‬‭the‬ ‭processing‬ ‭of‬ ‭ammonium‬ ‭ions‬ ‭so‬ ‭that‬ ‭they‬ ‭can‬ ‭ ‬ ‭have‬ ‭hydrocarbon‬ ‭chains‬ ‭that‬ ‭contain‬ ‭one‬ ‭or‬ – ‭be excreted in the urine‬ ‭more double bonds between carbon atoms‬ ‭ HIME‬‭: food with saliva‬ C ‭–‬ ‭an‬ ‭unsaturated‬ ‭state‬ ‭because‬ ‭changing‬ ‭a‬ ‭BOLUS‬‭: food swallowed - to be digested‬ ‭double‬‭bond‬‭into‬‭a‬‭single‬‭bond‬‭would‬‭increase‬‭the‬ ‭number of hydrogen atoms‬ ‭➔‬ ‭liquid‬ ‭at‬ ‭room‬ ‭temperature‬ ‭(e.g.:‬ ‭plants‬ ‭lesson 5 — end‬ ‭and‬‭fish‬‭oils‬‭such‬‭as‬ ‭sunflower‬‭oil‬‭and‬‭cod‬ ‭liver oil)‬ ‭LESSON #6:‬ ‭❖‬‭LIPIDS‬‭─────────────────────‬ ‭TRANS FAT‬ ‭-‬ ‭ rganic compounds used by cells as long-term‬ o -‭ ‬ ‭ roduced from‬‭hydrogenation‬ p ‭energy storage‬ ‭-‬ ‭common‬ ‭in‬ ‭fast‬ ‭foods,‬ ‭fried‬ ‭foods,‬ ‭and‬ ‭many‬ ‭-‬ ‭hydrophobic‬‭and‬‭insoluble in water‬‭because‬ ‭junk food products‬ ‭they have hydrocarbon chains that are nonpolar‬ ‭-‬ ‭consuming‬ ‭foods‬ ‭containing‬ ‭trans‬ ‭fats‬ ‭as‬ ‭and repellent to water‬ ‭increases‬‭cholesterol‬‭levels‬‭may‬‭increase‬‭our‬‭risk‬ -‭ ‬ ‭nonpolar hydrocarbon chains‬ ‭of acquiring heart disease‬ ‭-‬ ‭monomer:‬‭fatty acid & glycerol‬ ‭-‬ ‭overconsumption‬‭of‬‭foods‬‭with‬‭fats‬‭may‬‭lead‬‭to‬ ‭PHOSPHOLIPIDS‬ ‭obesity and heart diseases‬ ‭-‬ ‭ as‬ ‭tails‬ ‭of‬ ‭two‬ ‭fatty‬ h ‭-‬ ‭bonds of lipids:‬‭ester bonds‬ ‭acid‬ ‭chains‬ ‭and‬ ‭a‬ ‭CLASSIFICATION OF LIPIDS‬ ‭head‬ ‭that‬ ‭contains‬ ‭a‬ ‭phosphate group‬ ‭FATS AND OILS‬ ‭-‬ ‭vital‬ ‭class‬ ‭of‬ ‭lipids‬ ‭-‬ ‭ ain composition of a fat:‬‭glycerol‬‭molecule‬ m ‭because‬ ‭they‬ ‭are‬ ‭the‬ ‭with‬‭three fatty acid‬‭chains that are combined‬ ‭primary‬ ‭components‬ ‭through a dehydration reaction (releases 3 water‬ ‭of cell membranes‬ ‭molecules)‬ ‭-‬ ‭hydrophilic‬ ‭head‬ ‭+‬ ‭-‬ ‭glycerol + fatty acids (long hydrocarbon that‬ ‭hydrophobic‬ ‭tail‬ ‭=‬ ‭stores high quantities of energy) =‬‭triglycerides‬ ‭phospholipid‬ ‭STEROIDS‬ ‭-‬ ‭ ave‬ ‭four‬ ‭interconnected‬ ‭carbon‬ ‭rings‬ ‭and‬ ‭no‬ h ‭fatty acid tails‬ ‭-‬ ‭have‬ ‭diverse‬ ‭roles,‬ ‭such‬ ‭as‬ ‭hormone‬ ‭synthesis‬ ‭and vitamin transport‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭10‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭-‬ ‭cholesterol‬ ‭and‬ ‭testosterone‬ ‭are‬ ‭examples‬ ‭of‬ ‭STRUCTURE‬ s‭ teroids‬ ‭-‬ ‭ ve-carbon‬ ‭sugar‬ ‭or‬ ‭pentose,‬ ‭a‬ ‭nitrogenous‬ fi ‭-‬ ‭cholesterol‬ ‭serves‬ ‭as‬ ‭the‬ ‭precursor‬ ‭of‬ ‭all‬ ‭other‬ ‭base,‬ ‭phosphate‬ ‭group,‬ ‭and‬ ‭sugar‬ ‭that‬ ‭varies‬ ‭steroid products‬ ‭with the type of nucleic acid‬ ‭-‬ ‭cholesterol‬ ‭is‬ ‭a‬ ‭key‬ ‭component‬ ‭of‬ ‭animal‬ ‭cell‬ ‭membranes‬ ‭and‬ ‭an‬ ‭essential‬ ‭component‬ ‭in‬ ‭our‬ ‭diet‬ ‭-‬ ‭testosterone‬‭is‬‭naturally‬‭synthesized‬‭by‬‭the‬‭male‬ ‭gonad‬‭to‬‭initiate‬‭many‬‭male‬‭specific‬‭changes‬‭in‬ ‭the body‬ ‭WAXES‬ ‭-‬ l‭ong-chain‬ ‭fatty‬ ‭acids‬ ‭that‬ ‭are‬ ‭bound‬ ‭to‬ ‭long-chain alcohols‬ ‭-‬ ‭molecules‬ ‭are‬ ‭packed‬ ‭tightly,‬ ‭so‬ ‭the‬ ‭resulting‬ ‭-‬ t‭ hese‬ ‭two‬ ‭sugars‬ ‭only‬ ‭differ‬ ‭in‬ ‭their‬ ‭second‬ ‭substance is firm and water-repellent‬ ‭carbon‬ ‭atom,‬ ‭wherein‬ ‭deoxyribose‬ ‭lacks‬ ‭an‬ ‭-‬ ‭solid‬‭at‬‭normal‬‭temperatures‬‭because‬‭they‬‭have‬ ‭oxygen‬ ‭atom‬ ‭that‬ ‭is‬ ‭otherwise‬ ‭present‬ ‭in‬ ‭a‬ ‭a high melting point‬ ‭ribose‬ ‭-‬ ‭produced‬ ‭by‬ ‭plants‬ ‭to‬ ‭prevent‬ ‭desiccation‬ ‭or‬ ‭water loss when exposed to too much sunlight‬ ‭-‬ ‭waxy‬ ‭water‬ ‭repellent‬ ‭layers‬ ‭are‬ ‭present‬ ‭in‬ ‭feathers of birds, and exoskeleton of insects‬ ‭-‬ ‭beeswax‬ ‭is‬ ‭a‬ ‭natural‬ ‭wax‬ ‭produced‬ ‭in‬ ‭honeycombs‬ ‭METABOLIC PROCESSES‬ ★ ‭ ‬ L ‭ IPOLYSIS‬ ‭-‬ ‭ itrogenous‬ ‭bases‬ ‭in‬ ‭DNA‬ ‭and‬ ‭RNA‬ ‭can‬ ‭be‬ n ‭-‬ ‭break‬ ‭down‬ ‭of‬ ‭lipids‬‭to‬‭bring‬‭it‬‭back‬‭to‬‭glycerol‬ ‭classified‬ ‭into‬ ‭pyrimidines‬ ‭with‬ ‭a‬ ‭single‬ ‭carbon‬ ‭and fatty acids that starts in the intestine‬ ‭nitrogen‬ ‭ring,‬ ★ ‭ ‬ ‭BETA OXIDATION‬ ‭while‬ ‭the‬ ‭purines‬ ‭-‬ ‭cellular respiration‬ ‭contain‬ ‭two‬ ‭-‬ ‭generates‬ ‭energy‬ ‭and‬ ‭synthesizes‬ ‭new‬ ‭lipids‬ ‭fused‬ ‭from‬‭smaller‬‭constituent‬‭molecules.‬‭This‬‭process‬ ‭carbon-nitrogen‬ ‭produces‬ ‭molecules‬ ‭which‬ ‭are‬ ‭used‬ ‭in‬ ‭rings‬ ‭mitochondria to synthesize ATP‬ ‭-‬ ‭DNA‬ ‭strands‬ ‭are‬ ‭-‬ ‭products of glucose can be converted into lipids‬ ‭linked‬ ‭by‬ ‭hydrogen‬ ‭bonds.‬ ‭lesson 6 — end‬ ‭A‬ ‭pairs‬ ‭with‬ ‭T,‬ ‭while G pairs with C‬ ‭LESSON #6:‬ ‭❖‬‭NUCLEIC ACIDS‬‭───────────────‬ ‭-‬ t‭ he‬ ‭antiparallel‬ ‭nature‬ ‭of‬ ‭the‬ ‭DNA‬ ‭molecule‬ ‭is‬ ‭-‬ ‭stores‬ ‭our‬ ‭genetic‬ ‭information‬ ‭and‬ ‭encodes‬ ‭all‬ ‭essential‬‭to‬‭the‬‭synthesis‬‭of‬‭new‬‭DNA‬‭molecules‬ t‭ he information needed for protein synthesis‬ ‭and‬‭complementary‬‭RNA‬‭molecules‬‭required‬‭for‬ ‭-‬ ‭two‬ ‭groups‬ ‭of‬ ‭nucleic‬ ‭acids‬ ‭exist—the‬ ‭gene expression‬ ‭deoxyribonucleic‬ ‭acid‬ ‭(DNA)‬ ‭and‬ ‭ribonucleic‬ ‭acid (RNA)‬ -‭ ‬ ‭found in nucleus or nucleoid‬ ‭-‬ ‭biological‬ ‭polymers‬ ‭that‬ ‭consist‬ ‭of‬ ‭repeating‬ ‭subunits‬ ‭-‬ ‭monomer:‬ ‭nucleotide‬‭—small‬ ‭organic‬ ‭molecules‬ ‭that‬ ‭may‬ ‭function‬ ‭as‬ ‭energy‬ ‭carriers,‬ ‭enzyme‬ ‭helpers,‬ ‭chemical‬ ‭messengers,‬ ‭and‬ ‭information‬ ‭repositories‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭11‬ ‭1ST SEMESTER — 2ND QUARTER | 11 STEM 6‬ ‭DNA & RNA‬ ‭ROLES OF RNA MOLECULES‬ ‭-‬ ‭ se‬ ‭protein-coding‬ ‭information‬ ‭of‬ ‭DNA‬ ‭(more‬ u ‭suitable for short-term functions)‬ -‭ ‬ ‭protein synthesis‬ ‭-‬ ‭RNA production‬ ‭-‬ ‭mRNA‬ ‭(carries‬ ‭a‬ ‭temporary‬ ‭copy‬ ‭of‬ ‭the‬ ‭information‬ ‭in‬ ‭the‬ ‭gene‬ ‭of‬ ‭DNA,‬ ‭which‬ ‭will‬ ‭eventually‬ ‭be‬ ‭translated‬ ‭during‬ ‭gene‬ ‭expression),‬ ‭tRNA‬ ‭(helps‬ ‭translate‬ ‭mRNA‬ ‭by‬ ‭matching‬ ‭mRNA‬ ‭information‬ ‭with‬ ‭the‬ ‭correct‬ ‭amino‬ ‭acids),‬ ‭rRNA‬ ‭(makes‬ ‭up‬ ‭both‬ ‭the‬ ‭large‬ ‭and small subunits of ribosomes)‬ ‭ ETABOLIC PROCESSES‬ M ‭-‬ ‭nucleic‬‭acid‬‭catabolism‬‭(blue)‬‭and‬‭resynthesis‬‭of‬ ‭RNA‬ ‭DNA‬ ‭nucleotides‬ ‭by‬ ‭salvage‬ ‭pathways‬ ‭(red)‬ ‭always‬ ‭ribose‬ ‭deoxyribose‬ ‭go together‬ ‭A, G, U, C‬ ‭A, G, T, C‬ ‭single stranded‬ ‭double stranded‬ ‭aids in gene‬ ‭stores genetic‬ ‭expression‬ ‭information‬ ‭-‬ ‭ oth‬ ‭of‬ ‭the‬ ‭nucleic‬ ‭acids‬ ‭consist‬ ‭of‬ ‭nucleotides‬ b ‭that‬ ‭are‬ ‭linked‬ ‭together‬ ‭into‬ ‭chains‬ ‭via‬ ‭phosphodiester‬‭linkages‬ ‭FUNCTIONS OF NUCLEOTIDES‬ -‭ ‬ i‭nvolved in the metabolic activities of cells‬ ‭-‬ ‭regulate enzymatic reactions‬ ‭-‬ ‭store‬‭large‬‭amounts‬‭of‬‭energy‬‭(ATP—‬‭composed‬ ‭of‬ ‭a‬ ‭nucleoside,‬ ‭particularly‬ ‭an‬ ‭adenine‬ ‭plus‬ ‭ 1.‬ 0 ‭ribose, and three phosphates)‬ ‭-‬ ‭digestion‬ ‭in‬ ‭the‬ ‭small‬ ‭intestine‬ ‭through‬ ‭endonuclease enzymes‬ ‭02.‬ ‭-‬ ‭phosphodiesterases digest oligonucleotides‬ ‭03.‬ ‭-‬ ‭nucleotides‬ ‭are‬ ‭hydrolyzed‬ ‭through‬ ‭nucleotidases‬ ‭04.‬ ‭-‬ ‭nucleoside‬ ‭phosphorylase‬ ‭breaks‬ ‭down‬ ‭nucleosides‬ ‭-‬ ‭ ydrolyzing‬‭the‬‭ester‬‭bond‬‭in‬‭the‬‭last‬‭phosphate‬ h ‭group‬ ‭of‬ ‭adenosine‬ ‭triphosphate‬ ‭releases‬ ‭a‬ ‭large‬‭amount‬‭of‬‭free‬‭energy‬‭that‬‭can‬‭be‬‭used‬‭to‬ ‭drive‬ ‭many‬ ‭cellular‬ ‭processes‬ ‭necessary‬‭for‬‭the‬ ‭maintenance and survival of organisms‬ ‭ROLES OF DNA MOLECULES‬ -‭ ‬ s‭ torage of genetic information‬ ‭-‬ ‭expression of genetic information‬ ‭end of gen bio I — 2nd Q‬ ‭-‬ ‭ability to be replicated‬ ‭:(‬ ‭-‬ ‭variation through mutation‬ ‭❛‬ ‭notes ni ayesha‬‭‧₊˚✧‬‭|‬‭Page‬‭12‬

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