Questions and Answers
What is the process of developing viral envelopes at the cell membrane called?
Budding
What reflects the composition of the membrane from which viral envelopes were derived?
Lipid content
What interacts directly with the cytoplasmic tails of envelope proteins (viral spikes) during budding?
Nucleocapsid
What is inserted into the lipid membrane to form the viral envelope?
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What are the main criteria used to group virus species into genera?
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Which type of virus tends to have a reverse transcriptase (RT) step in their replication cycle?
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What is a characteristic of most '' RNA genomes that are less than 10kb?
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Which type of virus tends to have fragmented genomes and capsids with icosahedral symmetry?
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What is a characteristic of all '' strand viruses that infect vertebrates?
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What do satellite viruses encode?
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What is a characteristic of viroids?
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What are the main criteria used to group virus genera into families?
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Which type of virus tends to have an envelope?
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What is a characteristic of viruses with ssDNA genomes?
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What is a characteristic of most dsRNA viruses?
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What is a characteristic of satellite nucleic acids?
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Which type of integral membrane proteins have different orientations and signal sequences for membrane insertion?
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What is the function of glycosylation of viral surfaces?
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What do packaging signals on viral genomes do?
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What do core proteins associated with the viral genome inside the capsid do?
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What drives the formation of viral envelopes by budding?
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How can virions release their genomes?
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What triggers the energetic metastability of virions for dissociation?
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What are the criteria for virus classification?
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What does capsid assembly vary based on?
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What is the function of the ectodomain of Hemagglutinin (HA) from influenza virus?
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What prevents viral aggregation and dehydration?
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What may involve different mechanisms depending on the virus type?
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Study Notes
Viral Envelope Glycoproteins and Capsid Assembly
- Envelope glycoproteins have large glycosylated ectodomains, hydrophobic transmembrane anchor domains, and short internal tails, synthesized in the ER and inserted into the plasma membrane via standard export pathways.
- There are two types of integral membrane proteins, Type I and Type II, each with different orientations and signal sequences for membrane insertion.
- Hemagglutinin (HA) from influenza virus has an ectodomain for cell receptor binding, a transmembrane anchor domain, and a cytoplasmic tail.
- Glycosylation of viral surfaces prevents dehydration and reduces protein-protein interactions to prevent viral aggregation.
- Capsid assembly varies based on size, shape, and genomic composition and may involve scaffolding proteins and concatemer formation to fill the genome.
- Packaging signals on viral genomes interact with capsid proteins to direct the specificity of genome incorporation into virions.
- Core proteins associated with the viral genome inside the capsid neutralize negative charges on DNA and condense the viral DNA for optimal packaging, resembling chromatin.
- Interactions between viral proteins drive the formation of viral envelopes by budding, involving membrane curvature and localized protein aggregates.
- Budding can be driven by interactions between envelope glycoproteins, matrix proteins, or nucleocapsids, and may involve different mechanisms depending on the virus type.
- Virions can release their genomes through proteolytic cleavage of capsid proteins, unspooling of the genome, or interaction with cytoplasmic components.
- Virions are energetically metastable and can easily dissociate with the right trigger, such as binding to a receptor or protein on the cell surface or in the cytoplasm.
- Virus classification is based on molecular architecture, genetic relatedness, and host organism, with criteria including nucleic acid genome type, strandedness, topology, capsid symmetry, and presence or absence of an envelope. Comparing genomic and amino acid sequences helps determine genetic relatedness.
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