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Questions and Answers
What is an operon?
What is an operon?
Is the operon described inducible or repressible?
Is the operon described inducible or repressible?
Repressible
What effect will a mutation at the operator site have on a repressible operon?
What effect will a mutation at the operator site have on a repressible operon?
The operon will always be transcriptionally active.
Where might a mutation occur in a mutant strain of E. coli that produces β-galactosidase in the presence and absence of lactose?
Where might a mutation occur in a mutant strain of E. coli that produces β-galactosidase in the presence and absence of lactose?
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What is the function of the promoter in the E. coli lac operon?
What is the function of the promoter in the E. coli lac operon?
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What does the repressor do in the E. coli lac operon?
What does the repressor do in the E. coli lac operon?
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Place the events of gene regulation by the lac operon in order from the introduction of lactose to when the cell begins to digest lactose:
Place the events of gene regulation by the lac operon in order from the introduction of lactose to when the cell begins to digest lactose:
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Is the lac operon inducible or repressible?
Is the lac operon inducible or repressible?
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What happens to the trp operon when levels of tryptophan in the cell are low?
What happens to the trp operon when levels of tryptophan in the cell are low?
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Transcription occurs in the nucleus in eukaryotic gene regulation.
Transcription occurs in the nucleus in eukaryotic gene regulation.
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What are CpG islands?
What are CpG islands?
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What is a missense mutation?
What is a missense mutation?
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What environmental agent significantly increases mutation rates?
What environmental agent significantly increases mutation rates?
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Which choice is not a mechanism of gene regulation after transcription in eukaryotes?
Which choice is not a mechanism of gene regulation after transcription in eukaryotes?
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Study Notes
Gene Regulation in Operons
- Operon: A cluster of genes regulated by a single promoter, producing one mRNA strand.
- Repressible Operon: Transcription is normally active but stops in response to a specific molecule, e.g., compound B inhibits transcription when present.
- Inducible Operon: Transcription is off until activated by a specific molecule, such as lactose in the lac operon.
Lac Operon Specifics
- Lac Repressor: Binds to the lac operator and inhibits transcription when lactose is absent.
- Regulatory Mechanism: Allolactose, formed from lactose, binds to the repressor, inactivating it and allowing transcription.
- Transcription Steps: Introduction of lactose → Repressor inactivated → RNA polymerase binds leading to lactose gene expression → Digestion of lactose begins.
Tryptophan Operon Context
- trp Operon Repression: Active when tryptophan levels are low. When levels rise, tryptophan binds to the repressor, leading to transcription termination.
- Transcription Regulation Steps: Low tryptophan → RNA polymerase binds → Tryptophan synthesized → High levels induce repressor binding → Transcription stops.
Comparative Gene Regulation
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Prokaryotic vs. Eukaryotic:
- Prokaryotic: Operons, no introns, simultaneous transcription/translation in cytoplasm.
- Eukaryotic: Genes on different chromosomes, mRNA modified (5' cap, poly-A tail), transcription in nucleus, translation in cytoplasm.
Post-Transcriptional Control
- Alternative RNA Splicing: Allows production of multiple proteins from a single gene.
- MicroRNA (miRNA): Binds to mRNA, preventing translation and regulating gene expression.
- Epigenetic Regulation: Heritable gene expression changes without DNA sequence alteration, e.g., via chromatin modification.
Mutation Types
- Substitution Mutation: Replacement of one nucleotide with another, leading to potential amino acid changes (missense mutation).
- Frameshift Mutation: Caused by insertion or deletion of nucleotides, shifting reading frame.
- Somatic vs. Germ-Line Mutations: Somatic affects the individual; germ-line can be inherited.
Environmental Impacts on DNA
- Mutagen: Environmental agents that significantly increase mutation rates.
- UV Light Effects: Can cause pyrimidine dimers in DNA, leading to errors in DNA replication.
Structure & Functionality
- Basal Transcription Apparatus: A complex of RNA polymerase and associated proteins that initiates transcription.
- CpG Islands: Regions in DNA with high cytosine-guanine content, often involved in gene regulation.
Special Cases in Gene Expression
- Regulatory Genes: Produce products that influence transcription and translation of other genes.
- Operator Role: Site where repressor proteins bind to inhibit transcription.
- Catabolite Repression: Mechanism in which glucose availability influences the metabolism of alternative sugars.
Phenotypic Expression Examples
- Epigenetics in Tortoiseshell Cats: X-linked alleles expressed variably in cells due to chromatin modifications, producing a patchy color pattern.
Summary of Key Mechanisms
- Transcription Factors: Influence RNA polymerase activity by binding to DNA.
- Protein Modifications: Post-translational changes can include phosphorylation and methylation, impacting protein function and stability.
Overall Implications
- Different cell types express specific genes at varying levels, despite identical genetic information across cells.
- Understanding operons and gene regulation mechanisms is crucial in fields like biotechnology and medicine.
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