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Questions and Answers
What process allows proteins to regain their structure after being denatured?
What process allows proteins to regain their structure after being denatured?
Which of the following occurs in the stomach during protein digestion?
Which of the following occurs in the stomach during protein digestion?
What is the primary role of pancreatic proteases in digestion?
What is the primary role of pancreatic proteases in digestion?
What is a common example of protein denaturation?
What is a common example of protein denaturation?
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Which digestive enzyme is secreted in an inactive form by the stomach?
Which digestive enzyme is secreted in an inactive form by the stomach?
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Which enzyme helps precipitate milk protein in infants?
Which enzyme helps precipitate milk protein in infants?
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Where does the majority of protein digestion occur in the digestive system?
Where does the majority of protein digestion occur in the digestive system?
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What initiates the conversion of trypsinogen into its active form?
What initiates the conversion of trypsinogen into its active form?
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What is one sign of chronic malnutrition in children?
What is one sign of chronic malnutrition in children?
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What can excessive protein intake lead to regarding kidney health?
What can excessive protein intake lead to regarding kidney health?
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Which of the following proteins is a biomarker indicating protein status in the body?
Which of the following proteins is a biomarker indicating protein status in the body?
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What type of vegetarian diet includes dairy products but excludes eggs?
What type of vegetarian diet includes dairy products but excludes eggs?
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Which of the following is NOT a type of vegetarian diet?
Which of the following is NOT a type of vegetarian diet?
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What nutrient deficiency is more likely in vegans compared to other vegetarians?
What nutrient deficiency is more likely in vegans compared to other vegetarians?
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How does excessive intake of animal protein affect cardiovascular health?
How does excessive intake of animal protein affect cardiovascular health?
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What is a common dietary adjustment for semi-vegetarians?
What is a common dietary adjustment for semi-vegetarians?
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What is one function of proteins related to growth and development?
What is one function of proteins related to growth and development?
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Which statement accurately describes the role of proteins in the immune system?
Which statement accurately describes the role of proteins in the immune system?
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How do proteins help maintain fluid balance in the body?
How do proteins help maintain fluid balance in the body?
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What is the primary structure of a protein mainly characterized by?
What is the primary structure of a protein mainly characterized by?
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Which type of bond is NOT involved in the tertiary structure of a protein?
Which type of bond is NOT involved in the tertiary structure of a protein?
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What happens during a negative nitrogen balance?
What happens during a negative nitrogen balance?
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Which of the following is NOT a function of proteins?
Which of the following is NOT a function of proteins?
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What characteristic change occurs during the denaturation of proteins?
What characteristic change occurs during the denaturation of proteins?
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Which statement accurately describes quaternary structure?
Which statement accurately describes quaternary structure?
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Which protein is specifically known for its role in transporting oxygen in the blood?
Which protein is specifically known for its role in transporting oxygen in the blood?
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Which of the following structures can be formed due to hydrogen bonding in proteins?
Which of the following structures can be formed due to hydrogen bonding in proteins?
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What is the primary consequence of consuming protein in excess?
What is the primary consequence of consuming protein in excess?
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What effect does an imbalance of amino acids have on their absorption?
What effect does an imbalance of amino acids have on their absorption?
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Which type of proteins assist with hormone synthesis?
Which type of proteins assist with hormone synthesis?
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What happens to free amino acids that are in excess of the body's needs?
What happens to free amino acids that are in excess of the body's needs?
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What is a consequence of a mutation in DNA affecting the amino acid sequence?
What is a consequence of a mutation in DNA affecting the amino acid sequence?
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Which statement about denatured proteins is correct?
Which statement about denatured proteins is correct?
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How does food processing affect lysine absorption?
How does food processing affect lysine absorption?
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Which compound is produced during the Maillard Reaction that affects lysine absorption?
Which compound is produced during the Maillard Reaction that affects lysine absorption?
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What is the primary role of transamination in amino acid metabolism?
What is the primary role of transamination in amino acid metabolism?
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What role do disulfide bonds play in protein structure?
What role do disulfide bonds play in protein structure?
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What is the primary function of proteins in the body?
What is the primary function of proteins in the body?
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Which amino acid has a significantly higher rate of gluconeogenesis in the liver compared to others?
Which amino acid has a significantly higher rate of gluconeogenesis in the liver compared to others?
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What percentage of the Basal Metabolic Rate is used for protein turnover?
What percentage of the Basal Metabolic Rate is used for protein turnover?
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What is released during the deamination of amino acids?
What is released during the deamination of amino acids?
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Which amino acids mainly contribute to the TCA cycle?
Which amino acids mainly contribute to the TCA cycle?
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What role does tyrosine play in the body?
What role does tyrosine play in the body?
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Where do transamination reactions primarily occur in the body?
Where do transamination reactions primarily occur in the body?
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Which statement about amino acids is true regarding their usage in tissues?
Which statement about amino acids is true regarding their usage in tissues?
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What happens to the carbon skeleton of amino acids during deamination?
What happens to the carbon skeleton of amino acids during deamination?
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What is the function of pyridoxal phosphate in transamination reactions?
What is the function of pyridoxal phosphate in transamination reactions?
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Which process involves the conversion of amino acids into energy or metabolic intermediates?
Which process involves the conversion of amino acids into energy or metabolic intermediates?
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What is the role of proteins in hormone synthesis?
What is the role of proteins in hormone synthesis?
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What can happen when methionine levels in food are equal to those of phenylalanine and alanine?
What can happen when methionine levels in food are equal to those of phenylalanine and alanine?
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How do proteins regulate fluid balance in the body?
How do proteins regulate fluid balance in the body?
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Which of the following factors significantly reduces lysine absorption?
Which of the following factors significantly reduces lysine absorption?
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Which of the following correctly describes the supply of proteins in a 70 kg man?
Which of the following correctly describes the supply of proteins in a 70 kg man?
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What percentage of the Basal Metabolic Rate is allocated for protein turnover?
What percentage of the Basal Metabolic Rate is allocated for protein turnover?
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What happens to excess amino acids in the body?
What happens to excess amino acids in the body?
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What is the primary role of enzymes made of proteins?
What is the primary role of enzymes made of proteins?
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What is a function of antibodies in the immune system?
What is a function of antibodies in the immune system?
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Which of the following best describes the role of tyrosine in the body?
Which of the following best describes the role of tyrosine in the body?
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Which statement accurately reflects the concept of protein turnover?
Which statement accurately reflects the concept of protein turnover?
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What is the fate of amino acids during periods of tissue need?
What is the fate of amino acids during periods of tissue need?
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What specific process does protein turnover primarily require?
What specific process does protein turnover primarily require?
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What can result from consuming proteins in excess?
What can result from consuming proteins in excess?
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Which of the following describes the significance of amino acids being absorbed through simple diffusion?
Which of the following describes the significance of amino acids being absorbed through simple diffusion?
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Which amino acid directly serves as a precursor for serotonin synthesis?
Which amino acid directly serves as a precursor for serotonin synthesis?
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Which amino acid is involved in urea synthesis?
Which amino acid is involved in urea synthesis?
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What is the primary role of glutamic acid in the body?
What is the primary role of glutamic acid in the body?
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Which amino acid is synthesized from glucose in significant amounts?
Which amino acid is synthesized from glucose in significant amounts?
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What role does methionine play in biochemical processes?
What role does methionine play in biochemical processes?
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Which compound is formed from the interaction of glycine in the synthesis of hemoglobin?
Which compound is formed from the interaction of glycine in the synthesis of hemoglobin?
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What determines the unique characteristics of a protein?
What determines the unique characteristics of a protein?
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Which amino acid is linked to the synthesis of thyroid hormones?
Which amino acid is linked to the synthesis of thyroid hormones?
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What percentage of daily dietary energy is recommended to come from proteins for adults?
What percentage of daily dietary energy is recommended to come from proteins for adults?
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Which group of individuals is likely to have the highest protein requirement per unit of body weight?
Which group of individuals is likely to have the highest protein requirement per unit of body weight?
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How much additional protein is generally recommended per day for women during pregnancy with an animal-based diet?
How much additional protein is generally recommended per day for women during pregnancy with an animal-based diet?
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What is a common cause of protein deficiency?
What is a common cause of protein deficiency?
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Which factor does NOT increase protein requirements?
Which factor does NOT increase protein requirements?
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Which type of diet may potentially lead to protein deficiencies if not properly planned?
Which type of diet may potentially lead to protein deficiencies if not properly planned?
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Why do men generally require more protein than women?
Why do men generally require more protein than women?
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What is the recommended proportion of protein derived from animal sources for children?
What is the recommended proportion of protein derived from animal sources for children?
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What amino acids are considered limiting in grains?
What amino acids are considered limiting in grains?
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What combination can help enhance the protein quality of a diet?
What combination can help enhance the protein quality of a diet?
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Which essential amino acid is first limiting in corn?
Which essential amino acid is first limiting in corn?
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How can lysine deficiencies in wheat be addressed?
How can lysine deficiencies in wheat be addressed?
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What is one factor that contributes to decreased meat consumption?
What is one factor that contributes to decreased meat consumption?
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Which food combination improves essential amino acid balance?
Which food combination improves essential amino acid balance?
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What is typically true about protein from plant sources compared to animal sources?
What is typically true about protein from plant sources compared to animal sources?
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Why might families with low economic status rely more on plant-based sources for protein?
Why might families with low economic status rely more on plant-based sources for protein?
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What is a possible consequence of chronic protein deficiency in children?
What is a possible consequence of chronic protein deficiency in children?
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Which of the following conditions can lead to protein loss through urine?
Which of the following conditions can lead to protein loss through urine?
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How does inadequate carbohydrate intake affect protein utilization in the body?
How does inadequate carbohydrate intake affect protein utilization in the body?
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What is one of the primary effects of protein deficiency on the immune system?
What is one of the primary effects of protein deficiency on the immune system?
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Which of the following is a potential outcome of protein deficiency on economic resources?
Which of the following is a potential outcome of protein deficiency on economic resources?
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What condition is characterized by protein loss due to chronic bleeding?
What condition is characterized by protein loss due to chronic bleeding?
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How does protein deficiency generally affect blood health?
How does protein deficiency generally affect blood health?
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Which of the following describes the relationship between protein deficiency and economic performance?
Which of the following describes the relationship between protein deficiency and economic performance?
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Study Notes
Proteins
- Essential nitrogenous component for living organisms
- Named by Jöns Jakob Berzelius (1838)
- Derived from the Greek word "proteios" – meaning "primary" or "of first importance"
- Its importance was understood after 1926
- 1926: James B. Sumner demonstrated that urease is a protein enzyme
- 1958: Frederick Sanger determined the sequence of the first identified protein – insulin
- 1958: Structure of the first proteins identified: Hemoglobin and Myoglobin
- Unlike carbohydrates and fats, proteins contain nitrogen in their structure
- 16% of the protein's weight is nitrogen
- Cells and enzymes are composed of proteins
- Cells constantly change and renew themselves, requiring proteins
- Without sufficient protein intake, cells cannot renew themselves – essential!
- Proteins act as mediators in almost all processes within a cell
- Proteins are the most abundant macromolecules in the body
- 50% of our body's dry weight consists of proteins
- Proteins have large molecular weights
- The source of body proteins is the protein obtained through food
- The body does not have a protein reserve, only a short-term protein backup for emergency situations
- Proteins are large and complex molecules
- Broken down into simpler structures known as amino acids
- Formed by the combination of numerous and diverse amino acids
- All proteins are composed of 20 amino acids
- The unique sequence of amino acids gives a protein its specific characteristics and determines its function
- Approximately 130 additional amino acids exist with significant functions but do not form part of proteins
- Amino acids are composed of carbon, oxygen, hydrogen, and nitrogen
- Two amino acids (methionine, cysteine) also contain sulfur, called sulfur-containing amino acids
- These amino acids differ in structure and properties
- Amino acids are building blocks of protein
- Amino acids are an essential part of protein synthesis
Amino Acids
- Contain an amino group (NH2), carboxyl group (COOH), carbon (C), hydrogen (H), oxygen (O), and nitrogen (N)
- Lysine and methionine also contain sulfur (S)
- Animal cells cannot synthesize the amino group (NH2)
- Plants, however, can synthesize the amino group from atmospheric nitrogen and produce amino acids
- In plants: Nitrogen (NH2) from soil, CO2, and H2O combine to form amino acids (AA) and proteins
- In animals: Proteins from plants broken down into amino acids, converted, rearranged, and combined to synthesize the animal's own tissue proteins
- Amino acids are categorized based on side chains and pH, and based on their essential (indispensable) nature
- Listed are Aliphatic, Aromatic, Hydroxyl Group, Sulfur-Containing, Acidic, and Basic
- Essential amino acids cannot be produced by the human body—must be obtained through diet.
- Non-essential amino acids can be synthesized from other amino acids
- Also, there are semi-essential amino acids
- Aliphatic Amino Acids: Glycine, Alanine, Valine, Leucine, Isoleucine
- Aromatic Amino Acids: Phenylalanine, Tyrosine, Tryptophan
- Hydroxyl Group Amino acids Serine, Threonine
- Sulfur-Containing Amino Acids: Methionine, Cysteine
- Acidic Amino Acids Glutamic acid, Glutamine, Aspartic acid, Asparagine
- Basic Amino Acids Lysine, Arginine, Histidine, Ornithine
- Amino acids released through protein digestion are utilized in various metabolic purposes, including Protein biosynthesis, Carbohydrate biosynthesis, Energy production, Endogenous amino acid synthesis, Biosynthesis of nitrogen-containing organic biomolecules (purine and pyrimidine bases in nucleic acids), Ammonia and urea biosynthesis
- Amino acids exist freely in red blood cells, intracellular and extracellular fluids, and transported throughout the body via circulation
- Key reactions of amino acid metabolism: Transamination, and Deamination
Transamination
- Involve both catabolism and anabolism of amino acids
- Crucial in energy production, Glucose synthesis (gluconeogenesis), Synthesis of fats or ketone bodies, and Synthesis of non-essential amino acids
- Primarily occur in hepatocytes (liver cells) and, to a lesser extent, in heart and skeletal muscle cells, taking place in the cytoplasm
- Examples of reactions: Alanine + α-Ketoglutarate → Pyridoxal Phosphate → Glutamate + Pyruvate), Aspartate + α-Ketoglutarate → Pyridoxal Phosphate → Glutamate + Oxaloacetate, Valine + α-Ketoglutarate → Valine Aminotransferase → Pyridoxal Phosphate → Glutamate + Keto-isovalerate
- Pyruvate, oxaloacetate are substrates for glucose in the TCA cycle
- Alanine's hepatic gluconeogenesis rate is much higher than that of all other amino acids
- The amino acids alanine, aspartate, and glutamate most contribute to the TCA cycle
Deamination
- Removal of amino groups (NH3 ammonia) from amino acids
- Ammonia is then used for urea synthesis in the urea cycle
- Simultaneously, the carbon skeleton of the amino acid is converted into keto acids, which can be used for energy production or other metabolic pathways
- Transamination and deamination often occur simultaneously and are interconnected through a central molecule, glutamate
Structure of Protein
- Proteins are formed when one amino acid (AA) binds to another through a specific covalent bond
- First discovered AA: Asparagine (1806)
- Last discovered AA: Threonine (1938)
- Amino acids are named in accordance with sources
- Arginine: From asparagus
- Glutamate: From gluten
- Tyrosine: From tyros (in Greek) - cheese
- Glycine: From glykos (in Greek) - sweet
- For synthesis of body proteins (tissues, hemoglobin, enzymes, hormones), all 20 amino acids must be present simultaneously in sufficient amounts
- Body proteins contain these amino acids in specific proportions
- One type of amino acid cannot be substituted for another
- The sequence of amino acids determines a protein's unique characteristics
- Primary, Secondary, Tertiary, and Quaternary structure
- Primary structure: linear chain of amino acids
- Secondary structure: hydrogen bonds form helix or pleated sheet shape
- Tertiary Structure;Folding & bending, spherical shape, Disulfide bonds important
- Quaternary Structure: multiple polypeptides, with tertiary structure, held together, functional protein
Protein Utilization in the Body
- Every cell synthesizes large amounts of specific proteins
- For synthesis, essential amino acids (EAAs) must be obtained from dietary sources
- For non-essential amino acids, amino groups and α-keto acids are provided
- Synthesis of amino acids occurs through transamination reactions
- The amino group is removed via oxidative deamination (in the liver)
- The amino group is converted into urea and excreted in the urine
- A small amount of the amino group is used for the synthesis of non-essential amino acids
- If a meal contains a large amount of protein, more than half of the absorbed amino acids undergo deamination, while the remainder circulates as free amino acids
- Branched-chain amino acids mostly remain in their free form in circulation
- Further, amino acids are converted into pyruvic acid, oxaloacetic acid, acetic acid, and α-ketoglutaric acid – these intermediates enter the Krebs cycle;
- The conversion of some amino acids into others occurs in the liver (mediated by amino transferase and vitamin B6)
- Amino acids are categorized as Glycogenic or Ketogenic;
- Interconvertible amino acids (cysteine, tyrosine, arginine, proline, histidine, glycine, phenylalanine)
- Amino acids are used in synthesis of new proteins (ex: tryptophan, methionine, tyrosine, glycine, histidine, arginine, glutamine, asparagine, glutamic acid)
Protein Quality
- Proteins from plant sources often contain limited numbers of essential amino acids and lower digestibility, decreasing utilization rate
- Amount and type varies among food sources
- Low-Quality Protein: Contain fewer essential amino acids than body needs or have decreased digestibility
- High-Quality Protein; Contain all essential amino acids in sufficient amounts, and are easily digestible
- Complete protein: fully utilized by the body
- Combining grains and legumes (example: beans and rice, or traditional dishes like aşure (a Turkish dessert)); Consuming grains with dairy group foods (example: milk-based desserts, or soups with milk/yogurt)
- Protein from animal sources (eggs, milk, meat) commonly has higher digestibility (91–100%). Cereal proteins (79-90%), Legume proteins (69-90%)
- Removing bran from grains increases digestibility
- Chickpeas and lentils are more digestible than other legumes
- Limiting essential amino acids: legumes (methionine and cysteine), grains (lysine and threonine) corn (methionine, threonine, and tryptophan) wheat lysine
Protein Balance and Requirements
- To determine the body's protein requirements, nitrogen (N) balance studies are conducted
- Nitrogen balance: consumed nitrogen through food equals excreted nitrogen by the body
- Negative nitrogen balance: nitrogen intake is less than excretion leading to increased protein break down
- Positive nitrogen balance: nitrogen intake is more than excretion leading to increased protein synthesis
- Protein requirements vary with age, body size, gender, pregnancy, lactation, illnesses, injuries, and activity levels
- Pregnancy: Protein requirements increase (15-20 g/day additional on animal based diet, 25 g/day additional on plant-based diet)
- Lactation: Additional protein needed for milk production
- Illnesses: protein breakdown in the body increases
- Infants and children with growth and development delays: Additional protein required
- Athletes and laborers: Also require more protein to support strenuous physical activity
Deficiencies and Excesses
- Causes of protein deficiency: inadequate intake, incorrect nutrition/diet practices due to lack of knowledge, digestive/absorption disorders, protein loss, losses from chronic conditions (bleeding), losses from burns, impaired liver function
- Protein deficiency effects: slowed or stunted growth, weakness, delays in mental development, reduced academic performance, blood and hemoglobin disruption, anemia, reduced liver enzyme activity, delayed wound healing, decreased appetite, Kwashiorkor/Marasmus diseases
- Excessive protein intake: increases calcium excretion leading to osteoporosis, increased workload in the kidneys (kidney stone formation), high consumption of saturated fat, cholesterol, elevated risks of cardiovascular diseases and cancer, constipation, can result in constipation
Vegetarian Diets
- Lacto-vegetarian: Dairy products
- Ovo-vegetarian: Eggs
- Lacto-ovo vegetarian: Eggs and dairy products
- Semi-vegetarian (white vegetarian): Exclude some animal-based foods (usually red meat)
- Vegan: Do not consume any animal-derived foods
- Deficiencies may occur in vegans regarding iron, calcium, riboflavin, zinc, and vitamin B12
- Plant-based proteins should be combined in a variety of ways to balance essential amino acids (EAAs).
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Test your knowledge on the processes of protein digestion and denaturation with this quiz. Explore the roles of various enzymes, dietary implications, and the effects of protein intake on health. Suitable for students studying biology and nutrition.