Protein Chemistry Fundamentals

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Questions and Answers

Which element is found in proteins but is not typically found in carbohydrates or lipids?

  • Oxygen
  • Nitrogen (correct)
  • Hydrogen
  • Carbon

What is the approximate average percentage of nitrogen content in proteins?

  • 20.4%
  • 5.4%
  • 10.4%
  • 15.4% (correct)

How many standard amino acids are typically found in proteins?

  • 10
  • 700
  • 20 (correct)
  • 50

What determines the unique identity of a particular amino acid?

<p>The R group (side chain) (C)</p> Signup and view all the answers

A molecule that has both a positive and negative electrical charge is known as what?

<p>A zwitterion (B)</p> Signup and view all the answers

What is the property of amino acids that allows them to act as both an acid and a base?

<p>Amphoteric (D)</p> Signup and view all the answers

Under what pH conditions does a zwitterion accept a proton (H+) and form a positively charged ion?

<p>In acidic solution (C)</p> Signup and view all the answers

Which of these amino acids possess a sulfur atom?

<p>Cysteine (B)</p> Signup and view all the answers

Which of the following amino acids is classified as a nonpolar aliphatic amino acid?

<p>Alanine (A)</p> Signup and view all the answers

Which of the following characteristics is most typical of nonpolar amino acids when incorporated into a protein's structure?

<p>They are generally found in the interior of proteins (A)</p> Signup and view all the answers

A polar neutral amino acid is characterized by having what?

<p>A side chain that is polar but neutral (C)</p> Signup and view all the answers

Which amino acid is acidic?

<p>Aspartic acid (D)</p> Signup and view all the answers

Which of these amino acids is considered polar basic?

<p>Lysine (D)</p> Signup and view all the answers

What is the determining factor that identifies an amino acid as the D or L isomer?

<p>The spatial arrangement around the alpha-carbon (D)</p> Signup and view all the answers

Which isomer of amino acids is found in proteins of living organisms?

<p>L-isomers (D)</p> Signup and view all the answers

Which classification of amino acids cannot be synthesized in the body and must be obtained through the diet?

<p>Essential (B)</p> Signup and view all the answers

Which type of bond links amino acids together in proteins?

<p>Peptide bond (B)</p> Signup and view all the answers

According to IUPAC rules for naming peptides, what suffix is applied to all amino acid residues except the C-terminal residue?

<p>-yl (A)</p> Signup and view all the answers

What is the IUPAC name for the tripeptide Gly-Ser-Ala?

<p>Glycylserylalanine (A)</p> Signup and view all the answers

Which of the following peptides regulates the excretion of water by the kidneys?

<p>Vasopressin (B)</p> Signup and view all the answers

Which small peptide hormone is known for stimulating uterine contractions during labor?

<p>Oxytocin (B)</p> Signup and view all the answers

What type of peptide neurotransmitter is produced by the brain to reduce pain?

<p>Enkephalins (C)</p> Signup and view all the answers

Which peptide is known for its antioxidant properties and acts as a regulator of oxidation-reduction reactions in cells?

<p>Glutathione (B)</p> Signup and view all the answers

What distinguishes proteins from peptides?

<p>Proteins consists of at least 40 amino acid residues, while peptides do not (A)</p> Signup and view all the answers

What does the primary structure of a protein refer to?

<p>The sequence of amino acids (D)</p> Signup and view all the answers

What types of folding are characteristic of the secondary structure of a protein?

<p>Alpha helix and beta pleated sheets (B)</p> Signup and view all the answers

What type of bond stabilizes the alpha helix structure?

<p>Hydrogen bond (D)</p> Signup and view all the answers

What force holds two protein chains together in a beta ($\beta$) pleated sheet?

<p>Hydrogen bonding (D)</p> Signup and view all the answers

What level of protein structure is determined by the interactions between amino acid side chains (R groups)?

<p>Tertiary (C)</p> Signup and view all the answers

Which interaction is the strongest in the tertiary structure of a protein?

<p>Covalent disulfide bonds (B)</p> Signup and view all the answers

What type of interaction in tertiary structures involves the interactions between acidic and basic side chains?

<p>Ionic bonds/salt bridges (A)</p> Signup and view all the answers

Which tertiary structure interaction results when two nonpolar amino acids are located closely?

<p>Hydrophobic interactions (A)</p> Signup and view all the answers

What structural level is found only in multimeric proteins?

<p>Quaternary (C)</p> Signup and view all the answers

What determines protein classification based on shape?

<p>Tertiary and quaternary structures (B)</p> Signup and view all the answers

What are the two main classifications of proteins based on their overall molecular shape?

<p>Fibrous and globular (B)</p> Signup and view all the answers

Which term describes a structural change in a protein that results in the loss of its biological properties?

<p>Denaturation (C)</p> Signup and view all the answers

Which factor disrupts the hydrogen bonds that hold a protein together by causing molecule vibrations?

<p>High levels of thermal energy (C)</p> Signup and view all the answers

Which denaturing agent operate very similarly to the action of heat?

<p>Ultraviolet radiation (B)</p> Signup and view all the answers

Why do organic solvents such as ethanol act as denaturing agents?

<p>They compete for hydrogen bonding and interfere with R-group interactions (B)</p> Signup and view all the answers

Salts of heavy metals denature proteins by interacting with which chemical group?

<p>Sulfhydryl groups (D)</p> Signup and view all the answers

Flashcards

What are proteins?

Macromolecules that are major structural and functional components of cells.

Protein elements

The primary elements in proteins are carbon, hydrogen, oxygen, nitrogen, and sulfur.

What are amino acids?

Amino acids are the fundamental units that make up proteins.

Amino acid structure

General structure includes an amino group, a carboxyl group, an α-carbon, and a side chain (R group).

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What is a zwitterion?

A molecule with both positive and negative charges.

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What are amphoteric properties?

Amino acids have the ability to act as both an acid and a base.

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What is a Zwitterionic Property?

A molecule with functional groups with positive and negative electrical charges.

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What is Nonpolar amino acid?

Nonpolar amino acids contain one amino group, one carboxyl group, & a nonpolar side chain.

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What is Polar neutral amino acid?

A polar neutral amino acid that contains a side chain that is polar but neutral.

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What is Polar acidic amino acid?

Contains one amino group and two carboxyl groups, the side chain of a polar acidic amino acid bears a negative charge

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What is Polar basic amino acid?

Contains two amino groups and one carboxyl group, the side chain of a polar basic

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essential amino acids

Amino acids that cannot be synthesized in the body

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what are non-essential amino acids

Amino acids can be synthesized in the body itself and you do not need to acquire through diet.

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what are peptide bonds

formed between the amino acids is a special bond

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IUPAC peptide names

C-terminal amino acid residue remains unaltered; other residues receive modified names with a -yl suffix.

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What is Vasopressin?

Regulates the excretion of water by the kidneys. Important when Body is dehydrated.

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What is Oxytocin?

Produced in the pituitary gland, and stimulates uterine contractions.

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What are Enkephalins?

Pentapeptide neurotransmitters bind at receptor sites in the brain to reduce brain

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What is Glutathione?

regulator of oxidation-reduction reactions.

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What are Endorphins?

chemical signaling peptides. Interact with receptors in the brain to inhibit the transmission of pain signals

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What are Proteins?

A naturally occurring, is an extremely complex substance that consists of amino acid residues joined by peptide bonds

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Primary Structure

The sequence of amino acids in a protein's peptide chain

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Secondary structure

Regularly repeating spatial arrangements of amino acids

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Tertiary structure

overall three-dimensional shape of the protein

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Quaternary structure

three-dimensional shape of are amino acid residues

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What are Fibrous proteins?

Are elongated proteins

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what are Globular proteins

proteins that are folding into spherical or globular shapes

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What is denaturation

a structural change in a protein that results in the loss(usually permanent) of its biological properties

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