PCR Primer Design Basics

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RenownedEpiphany
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3 Questions

What is the recommended length for a primer in PCR?

18-30 bp

What is the optimal melting temperature (Tm) range for a primer in PCR?

55-72°C

What is the recommended percentage GC content for a primer in PCR?

50-60%

Study Notes

Primer Design in PCR

  • The recommended length for a primer in PCR is typically between 18-24 nucleotides.
  • The optimal melting temperature (Tm) range for a primer in PCR is between 55°C-65°C, with an ideal Tm around 60°C.
  • The recommended percentage GC content for a primer in PCR is between 40-60%.

Test your knowledge about the most important components of a good PCR primer design and the rules for designing effective primers, including length, Tm, GC content, hairpin structure, and primer dimer formation.

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