PAMPs, DAMPs, and Phagocyte Mobilization

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Questions and Answers

In the context of adaptive immunity, how does somatic hypermutation within B lymphocytes contribute to the affinity maturation process?

  • It diminishes the expression of MHC class II molecules on B cells, impairing their ability to present antigens to T helper cells.
  • It diversifies the variable regions of immunoglobulin genes, allowing for selection of B cells with higher affinity for the antigen. (correct)
  • It exclusively enhances the production rate of antibodies, thereby increasing the overall immune response magnitude.
  • It introduces random mutations in the T-cell receptor genes, leading to altered antigen specificity.

Considering the stochastic nature of V(D)J recombination and the subsequent introduction of junctional diversity, what is the theoretical upper limit for the number of distinct antigen receptors that a single individual could potentially express across their entire B-cell repertoire?

  • Approximately $10^6$, constrained by the limited number of available V, D, and J gene segments.
  • Around $10^9$, reflecting the diversity generated primarily by V(D)J recombination but not junctional diversity.
  • Limited to $10^{15}$, influenced by the limited number of circulating lymphocytes and the need for self-tolerance mechanisms.
  • In excess of $10^{12}$, stemming from the combinatorial diversity of V(D)J recombination, junctional diversity, and somatic hypermutation. (correct)

How does the phenomenon of 'original antigenic sin' impact the efficacy of influenza vaccines and the host's immune response to subsequent influenza infections?

  • It leads to a persistent state of immune tolerance, rendering individuals incapable of mounting effective responses to any influenza strain.
  • It enhances the immune response to novel influenza strains by eliciting broadly neutralizing antibodies that cross-react with conserved viral epitopes.
  • It preferentially elicits antibody responses against epitopes of the first influenza strain encountered, potentially compromising the response to antigenically drifted strains. (correct)
  • It restricts the migration of memory T cells to the lungs, thereby impairing viral clearance during subsequent influenza infections.

How does antibody-dependent cell-mediated cytotoxicity (ADCC) facilitate the elimination of target cells, and what type of immune cells are primarily involved in executing this process?

<p>By harnessing the cytotoxic activity of natural killer (NK) cells, which recognize and bind to antibodies coating the surface of target cells. (A)</p> Signup and view all the answers

What role do non-classical MHC molecules, such as HLA-E and HLA-G, play in modulating immune responses, and how do they differ from classical MHC class I and class II molecules in their functions?

<p>They primarily modulate innate immune responses by interacting with inhibitory receptors on natural killer (NK) cells, thereby regulating NK cell activity. (B)</p> Signup and view all the answers

Within the germinal center reaction, how does follicular dendritic cell (FDC) contribute to the survival and selection of high-affinity B cells?

<p>By capturing and displaying native antigens on their surface, enabling B cells to test the affinity of their B-cell receptors (BCRs) and compete for T-cell help. (C)</p> Signup and view all the answers

How does the disruption of central tolerance mechanisms, specifically the deletion of self-reactive T cells in the thymus and B cells in the bone marrow caused by AIRE deficiency, lead to the development of autoimmune diseases?

<p>It allows the survival and maturation of autoreactive lymphocytes, which can then migrate to peripheral tissues and initiate immune responses against self-antigens. (D)</p> Signup and view all the answers

In the context of T cell activation, how do costimulatory molecules, such as B7-1 (CD80) and B7-2 (CD86) expressed on antigen-presenting cells (APCs), interact with CD28 or CTLA-4 on T cells to modulate the immune response?

<p>B7-1 and B7-2 competitively bind to CD28 and CTLA-4, with CD28 ligation promoting T cell activation and CTLA-4 ligation suppressing T cell responses, thereby regulating the magnitude and duration of the immune response. (A)</p> Signup and view all the answers

What are the key distinctions between the roles of TH1, TH2, and TH17 helper T cell subsets in orchestrating adaptive immune responses, particularly in relation to cytokine production and the types of pathogens they are most effective against?

<p>TH1 cells activate macrophages to kill intracellular pathogens, TH2 cells promote eosinophil-mediated killing of helminths, and TH17 cells enhance neutrophil recruitment to combat extracellular bacteria and fungi. (A)</p> Signup and view all the answers

How do the principles of 'linked recognition' govern the interactions between B cells and T helper cells during the adaptive immune response, and what are the implications of this phenomenon for vaccine design and immune memory?

<p>Linked recognition requires that B cells and T helper cells recognize different epitopes on the same antigen molecule for effective T cell help and B cell activation. (B)</p> Signup and view all the answers

What is the role of Class I MHC molecules in cytotoxic T lymphocyte (CTL) responses, and how does the process of cross-presentation enable dendritic cells to initiate CTL responses against viruses or tumors that do not directly infect them?

<p>Class I MHC molecules present endogenous antigens to CD8+ T cells, initiating the adaptive immune response against intracellular pathogens and tumor cells. (D)</p> Signup and view all the answers

How does the immunological synapse formed between T cells and antigen-presenting cells (APCs) orchestrate T cell activation, and what roles do the central supramolecular activation cluster (cSMAC) and peripheral supramolecular activation cluster (pSMAC) play in this process?

<p>The cSMAC promotes sustained T cell receptor (TCR) signaling and peptide-MHC clustering, while the pSMAC provides adhesion and stabilization of the synapse. (A)</p> Signup and view all the answers

What are the main mechanisms that induce and maintain peripheral tolerance, and how do regulatory T cells (Tregs) contribute to the suppression of autoreactive lymphocytes in peripheral tissues?

<p>Peripheral tolerance involves mechanisms such as clonal anergy, ignorance, and suppression by Tregs, which inhibit the activation and effector functions of autoreactive lymphocytes. (B)</p> Signup and view all the answers

How do superantigens differ from conventional antigens in their mechanism of T cell activation, and what are the potential consequences of superantigen-mediated T cell stimulation for the host's immune system?

<p>Superantigens bind directly to the T cell receptor (TCR) and MHC class II molecules outside of the antigen-binding groove, causing a polyclonal activation of a large fraction of T cells. (D)</p> Signup and view all the answers

How does the phenomenon of 'immune checkpoint blockade' enhance antitumor immunity, and what are the primary checkpoint molecules targeted in cancer immunotherapy?

<p>Immune checkpoint blockade blocks inhibitory receptors, such as CTLA-4 and PD-1, on T cells, unleashing their cytotoxic activity against tumor cells. (D)</p> Signup and view all the answers

Given the complexity of immune responses, what are the key differences between active and passive humoral immunity?

<p>Active immunity involves the individual's own immune system producing antibodies, while passive immunity involves the transfer of pre-formed antibodies to an individual. (A)</p> Signup and view all the answers

If a previously healthy individual is exposed to a novel pathogen, leading to the activation of their adaptive immune system, which class of antibody would you expect to observe first?

<p>IgM, due to B cell antibody production in a primary response. (B)</p> Signup and view all the answers

What are the known classes of antibodies (immunoglobulins)?

<p>IgA, IgG, IgD, IgE, and IgM (B)</p> Signup and view all the answers

How do dendritic cells function as a 'key-link' between innate and adaptive immunity?

<p>By identifying and presenting antigens to cells so that they can learn and trigger an immune response. (D)</p> Signup and view all the answers

If an individual receives a vaccine to develop immunity against a common virus, what type of immunity will they form?

<p>Artificial Active (A)</p> Signup and view all the answers

Why is the site of maturation of T lymphocytes in the thymus?

<p>The thymus provide the proper signals for T cells to develop immunocompetence and self-tolerance. (B)</p> Signup and view all the answers

What is the function of the thymus in adaptive immunity?

<p>Site of T cell maturation into immunocompetent cells. (B)</p> Signup and view all the answers

Which of the following best describes humoral immunity?

<p>Protection against antigens by antibodies circulating in body fluids. (D)</p> Signup and view all the answers

The body must develop 'self-tolerance' in order to maintain homeostasis. Which description is most accurate?

<p>The process by which our immune cells do not attack our own body’s cells. (C)</p> Signup and view all the answers

What is the key difference between the function of helper T cells vs. cytotoxic T cells?

<p>Helper T cells provide assistance to other immune cells, while cytotoxic T cells directly kill infected or cancerous cells. (D)</p> Signup and view all the answers

What is a complete antigen?

<p>A substance with the ability to stimulate proliferation of specific lymphocytes and ability to react with activated lymphocytes. (C)</p> Signup and view all the answers

Which of the following best describes the role of MHC proteins in immune function?

<p>They present antigen fragments for T cell recognition. (A)</p> Signup and view all the answers

What is the significance of 'clonal selection' in adaptive immunity?

<p>Process by which lymphocytes are triggered to develop further based on binding to a specific antigen. (A)</p> Signup and view all the answers

After clonal selection, what is the next critical step for a lymphocyte?

<p>Differentiation and Proliferation (C)</p> Signup and view all the answers

Following the 'seeding' stage of lymphocytes, what is next for this cell?

<p>Encounter and bind to an antigen. (D)</p> Signup and view all the answers

What feature of adaptive immunity occurs following antigen processing triggered by an APC?

<p>Specific defenses or an immune response (D)</p> Signup and view all the answers

How do B cells act as Antigen Presenting Cells (APCs)?

<p>B cells activate helper T cells by presenting the processed antigen. (A)</p> Signup and view all the answers

Which immune cell type is NOT classified as an antigen-presenting cell (APC)?

<p>T lymphocytes (D)</p> Signup and view all the answers

Which characteristic is NOT attributed to antibodies?

<p>Targets and neutralize pathogens by endocytosis (B)</p> Signup and view all the answers

In antibody function, what is NOT a defensive mechanism in antibody function?

<p>Immunosuppression (A)</p> Signup and view all the answers

What process describes enhanced phagocytosis resulting from antibodies or complement coating the surface of a pathogen?

<p>Opsonization (A)</p> Signup and view all the answers

Flashcards

PAMPs and DAMPs

Molecular structures that form patterns, conserved and found on microorganisms.

Pathogen Recognition Receptors (PRRs)

Receptors on innate immune cells that recognize patterns on pathogens.

Leukocytosis

Movement of leukocytes within blood vessels due to inflammation.

Margination

Neutrophils clinging to blood vessel walls during inflammation.

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Diapedesis

Neutrophils squeezing through capillary clefts, exiting bloodstream.

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Chemotaxis

Neutrophils following chemical trail to infection site.

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Adaptive Immune System

A specific defense system, eliminates pathogens and abnormal cells.

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Specific and Systemic Immunity

Recognizes and targets specific antigens; not restricted to the initial site.

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Immunological Memory

Mounts stronger attacks to known antigens.

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Humoral Immunity

Antibody-mediated immunity.

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Cellular Immunity

Lymphocytes act against target cells, killing infected cells.

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Antigens

Substances that mobilize adaptive defenses and provoke immune response.

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Antigen Characteristics

Large, complex, not normally found in body non-self.

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Immunogenicity

Ability to stimulate proliferation of specific lymphocytes.

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Reactivity

Ability to react with activated lymphocytes and antibodies.

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Antigenic Determinants (Epitopes)

Parts of antigen that antibodies or lymphocyte receptors bind to.

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Self-Antigens

Proteins on cell surfaces, not antigenic to self.

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MHC Proteins

Glycoproteins coded by genes and unique to each individual.

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Cells of Adaptive Immunity

Adaptive immune system's crucial cells: B cells, T cells, APCs.

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B Lymphocytes (B cells)

Originate in red bone marrow; humoral immunity.

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T Lymphocytes (T cells)

Originate in red bone marrow, mature in thymus; cellular immunity.

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Antigen-Presenting Cells (APCs)

Do not respond to specific antigens, present antigens to T cells.

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Lymphocyte Origin

Lymphocytes originate in red bone marrow.

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Lymphocyte Maturation

Lymphocytes are educated and mature in primary lymphoid organs.

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Lymphocyte Seeding

Lymphocytes migrate to secondary lymphoid organs.

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Antigen Encounter and Activation

Naive lymphocyte encounters antigen, triggers development.

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Proliferation and Differentiation

Activated lymphocyte proliferates into clones.

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Antigen receptor diversity

Diversity in recognition by genes, not antigens.

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Dendritic Cells

In connective tissues and epidermis; mobile sentinels.

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Macrophages as APCs

In connective tissues and lymphoid organs; activate T cells.

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B Lymphocytes as APCs

Internalize antigen, present signature to helper T cells.

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Humoral Immune Response

Plasma cells that produce antibodies specific for the antigen.

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Primary Immune Response

Initial production of antibodies after first antigen encounter.

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Secondary Immune Response

Faster, stronger response upon re-exposure to antigen.

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Antibodies

B cell encounters target antigen, provokes humoral immune response

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Humoral response : Primary immune memory

Cell proliferation and differentiation upon exposure for the first time

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Artificially acquired (Passive)

Antibodies acquired by injection

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Antibodies

Also called immunoglobins

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Antibodies

inactivate and tag them

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Neutralization

simplest and most important

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Antibody Actions

cross-linked into large lattice lumps

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Study Notes

PAMPs and DAMPs

  • PAMPs are molecular structures that form patterns, including proteins and carbohydrates
  • Patterns are conserved and found on microorganisms like bacteria, viruses, and fungi
  • Innate immune cells use pathogen recognition receptors (PRRs) to recognize patterns
  • Innate immune cells include macrophages, monocytes, neutrophils, NK cells, and dendritic cells
  • Toll-Like Receptors (TLRs) are examples of PRRs
  • PAMP-PRR binding triggers innate immunity responses like inflammation, fever, and phagocytosis

Phagocyte Mobilization

  • A wound or infection causes an inflammatory reaction
  • Inflammation is triggered at the infection site, leading to leukocytosis (leukocyte movement in blood vessels)
  • Neutrophils cling to the blood vessel (capillary) wall through margination
  • Margination makes the capillary leaky
  • Neutrophils flatten and squeeze through capillary clefts, called diapedesis
  • Neutrophils follow a chemical trail (chemotaxis) from the initial inflammatory process
  • Neutrophils engulf pathogens and neutralize the infectious threat

Acute Inflammation Overview

  • Tissue injury triggers the release of inflammatory chemicals and leukocytosis-inducing factors
  • Arterioles dilate, increasing capillary permeability and causing local hyperemia
  • Neutrophils, monocytes, and lymphocytes are drawn to the area via chemotaxis
  • Leukocytosis causes increased white blood cells in the bloodstream
  • Leukocytes migrate to the injured area and cling to capillary walls, known as margination
  • Diapedesis occurs as leukocytes pass through capillary walls
  • Fluid leaks from capillaries, forming exudate and causing local swelling
  • Pain occurs
  • Clotting proteins leak and wall off the area to prevent injury spread
  • A fibrin patch forms for repair scaffolding
  • Phagocytosis of pathogens and dead cells occurs
  • Pus may form and is eventually cleared
  • This process results in healing

Adaptive Defenses

  • The adaptive immune system is a specific defensive system that eliminates pathogens or abnormal cells
  • This system amplifies the inflammatory response and activates the complement system
  • Must be primed by initial exposure to a foreign substance, which takes time

Characteristics of Adaptive Immunity

  • Adaptive immunity is specific, recognizing and targeting specific antigens
  • It is systemic, not restricted to the initial infection site
  • It exhibits memory, launching a stronger attack on "known" (second or subsequent exposure) antigens

Two Main Branches of the Adaptive System

  • Humoral (antibody-mediated) immunity
  • Cellular (cell-mediated) immunity

Humoral Immunity (B cells)

  • Antibodies are produced by lymphocytes to circulate freely in body fluids
  • They temporarily bind to target cells to inactivate or mark them for destruction
  • Humoral immunity has extracellular targets

Cellular Immunity (T cells)

  • Lymphocytes act against target cells directly by killing infected cells
  • They can act indirectly, by releasing chemicals to enhance inflammatory response
  • Cellular immunity has cellular targets

Antigens

  • Antigens are substances that mobilize adaptive defenses and provoke an immune response
  • They are the targets of all adaptive immune responses
  • Most are large, complex molecules not normally found in the body (nonself)

Characteristics of Antigens

  • Can be a complete antigen or hapten (incomplete)
  • Contain antigenic determinants (epitopes)
  • Can be a self-antigen

Complete Antigens

  • Have two important functional properties immunogenicity and reactivity
  • they stimulate the proliferation of specific lymphocytes
  • They react with activated lymphocytes and antibodies released by immunogenic reactions
  • Examples include foreign proteins, polysaccharides, lipids, and nucleic acids
  • Commonly found on foreign invaders such as pollen and microorganisms

Incomplete Antigens

  • Also called haptens
  • Involve small molecules, so they are not immunogenic by themselves
  • Examples include peptides, nucleotides, and some hormones
  • If a hapten attaches to the body's own proteins, it may become immunogenic
  • The combination of protein and hapten is then seen as foreign
  • The immune system attacks both the hapten and the body's own proteins
  • Examples include poison ivy, animal dander, detergents, and cosmetics

Antigenic Determinants

  • Parts of antigen that antibodies or lymphocyte receptors bind to
  • Most naturally occurring antigens have numerous antigenic determinants
  • These determinants mobilize different lymphocyte populations
  • Form different kinds of antibodies against them
  • Large, chemically simple molecules (plastics) have little or no immunogenicity

Self-Antigens: MHC Proteins

  • All cells are covered with a variety of proteins
  • These are not antigenic to self, but may be antigenic to others in transfusions or grafts
  • MHC proteins are a group of glycoproteins
  • Coded by genes of major histocompatibility complex (MHC) and unique to each individual
  • MHC is a protein type on all cells that creates an individualized signature that is specific for each person
  • They contain a groove that holds a piece of self-antigen or foreign antigen
  • T lymphocytes can recognize only antigens presented on MHC proteins

Three Crucial Types of Cells

  • Two types of lymphocytes: B and T lymphocytes
  • Antigen-presenting cells (APCs)

Antigen-Presenting Cells (APCs)

  • Do not respond to specific antigens
  • Play essential auxiliary roles in immunity by introducing antigens to T cells to prompt learning
  • Larger antigens can be presented to B cells
  • B cells can act like APCs

Lymphocyte Origin

  • Both B and T lymphocytes originate in red bone marrow

Lymphocyte Maturation

  • Lymphocytes mature in primary lymphoid organs (bone marrow and thymus)
  • Immunocompetence lymphocyte can recognize only one kind of antigen
  • B and T cells display only one kind of receptor on surface
  • Self-tolerance lymphocytes must be unresponsive to own antigens
  • B cells mature in red bone marrow; the process of B cell maturation is not yet fully understood

Lymphocyte Seeding

  • Immunocompetent B and T cells not exposed to an antigen are called naive.
  • Naive lymphocytes are exported from primary lymphoid organs to "seed" secondary lymphoid organs
  • Secondary lymphoid organs include (lymph nodes, spleen, etc.)
  • This process increases chances of encountering antigen

Lymphocyte Antigen Encounter

  • Naive lymphocyte's first encounter with an antigen triggers lymphocyte to develop further
  • A lymphocyte is selected to differentiate into an active cell by binding to its specific antigen
  • Referred to as clonal selection
  • With the correct signals, lymphocytes will complete their differentiation into active cells
  • The correct signals refer to genetic recombination needed for T and B cells to recognize an antigen

Lymphocyte Proliferation and Differentiation

  • Once selected and activated, lymphocyte proliferates forming clones
  • Most clones become effector cells that fight infections
  • The remaining clones become memory cells that respond quickly the next time an antigen is encountered
  • B and T memory cells and effector T cells circulate continuously

Antigen Receptor Diversity

  • Genes, not antigens, determine which foreign substances the immune system will recognize
  • Variety of immune cell receptors are result of acquired genetic knowledge of microbes
  • Approximately 25,000 different genes code for up to a billion different types of lymphocyte antigen receptors
  • Numerous receptors result in multiple combinations
  • Gives rise to different T and B cell populations

Dendritic Cells

  • Found in connective tissues and epidermis
  • Act as boundary tissue mobile sentinels
  • They phagocytize pathogens that enter tissues
  • Dendritic cells enter lymphatics to present antigens to T cells in lymph node
  • Most effective known antigen presenter
  • They are the key link between innate and adaptive immunity

Macrophages

  • Widely distributed in connective tissues and lymphoid organs
  • Present antigens to T cells, which activates them
  • Activated macrophages are voracious phagocytic killers that trigger powerful inflammatory responses and recruit additional defenses

B Lymphocytes

  • Do not activate naive T cells
  • Internalize the antigen and process it (into peptides) to make it part of the B cell membrane signature (MHC)
  • This signature can be presented on the B cell MHC signature to T helper cells
  • T helper cells help in their own activation (i.e., T cell activation)

Humoral Immune Response

  • The B cell encounters a target antigen, it provokes a humoral immune response
  • Antibodies specific for that particular antigen are then produced
  • B cells are activated when antigens bind to surface receptors cross-linking them
  • Receptor-mediated endocytosis of cross-linked antigen-receptor complexes results in proliferation and differentiation of the B cell into effector cells
  • Most clone cells become plasma cells, antibody-secreting effector cells
  • Antibodies secrete specific antibodies at 2000 molecules per second for 4 to 5 days and then die
  • Antibodies circulate in blood or lymph, binding to free antigens, marking them for destruction by innate or other adaptive mechanisms

Clone Cells Become Memory Cells

  • Provide immunological memory
  • Mount an immediate response to future exposures of the same antigen

Primary Immune Response

  • Involves cell proliferation and differentiation upon exposure to antigen for the first time
  • The lag period lasts 3 to 6 days
  • Peak levels of plasma antibody are reached in 10 days
  • Then declines

Secondary Immune Response

  • Re-exposure to antigen gives faster, more prolonged, more effective response
  • Sensitized memory cells provide immunological memory
  • Respond within hours, not days
  • Antibody levels peak in 2 to 3 days at much higher levels
  • Antibodies bind with greater affinity
  • Antibody level can remain high for weeks to months

Antibodies Classes

  • IgM is the first immunoglobulin class secreted by plasma cells during the primary response
  • It readily fixes and activates complement
  • It exists in monomer and pentamer forms
  • The pentamer circulates in blood plasma
  • IgA the dimer, referred to as secretory IgA, found in body secretions
  • It helps stop pathogens from attaching to epithelial cell surfaces
  • IgD found on the B cell surface that functions as a B cell antigen receptor
  • IgG the most abundant antibody in plasma accounting for 75-85% of circulating antibodies
  • It protects against bacteria, viruses, and toxins circulating in blood and lymph and crosses the placenta to confer passive immunity
  • IgE stem end binds to mast cells or basophils and is secreted by plasma cells in the skin.
  • Antigen binding triggers cells to release histamine and other inflammation chemicals
  • Only traces of IgE are found in plasma

Antibody Targets and Functions

  • Antibodies do not destroy antigens, they inactivate and tag them
  • They form antigen-antibody (immune) complexes
  • Defensive mechanisms include neutralization, agglutination, precipitation, and complement fixation

Antibody Action - Neutralization

  • It is the simplest, most important defensive mechanism, where antibodies block specific sites on viruses or bacterial exotoxins
  • This prevents antigens from binding to receptors on tissue cells
  • Antigen-antibody complexes undergo phagocytosis

Antibody Action - Agglutination

  • Antibodies can be directed to the same determinant on two different antigens at the same time
  • The two-armed antibody has a variable region capable of binding to one antigen
  • This allows for antigen-antibody complexes become cross-linked into large lattice like clumps
  • This process is referred to as agglutination
  • Clumping makes it easier for phagocytes to find and engulf pathogens
  • This disables pathogens from action

Antibody Action - Precipitation

  • Soluble molecules are cross-linked into complexes
  • Complexes precipitate out of solution
  • Precipitated complexes are easier for phagocytes to engulf

Antibody Action - Complement Fixation

  • A primary antibody defense
  • Several antibodies bound close together on same antigen
  • This causes complement-binding sites on stem regions to become aligned
  • This triggers complement fixation, cell lysis, and other complement functions such as inflammatory response amplification, opsonization

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