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Questions and Answers
Which of the following statements accurately describes endogenous and exogenous absorbers?
Which of the following statements accurately describes endogenous and exogenous absorbers?
What characterizes the near-infrared window in terms of tissue penetration?
What characterizes the near-infrared window in terms of tissue penetration?
How is the absorption cross-section defined?
How is the absorption cross-section defined?
What is the significance of the molar absorption coefficient in tissue optics?
What is the significance of the molar absorption coefficient in tissue optics?
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Which aspect of optical wavelengths is not true about the near-infrared window?
Which aspect of optical wavelengths is not true about the near-infrared window?
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What does Avogadro's constant represent in the context of absorption properties?
What does Avogadro's constant represent in the context of absorption properties?
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What is the primary role of chromophores in biological tissues?
What is the primary role of chromophores in biological tissues?
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Which of the following best describes the relationship between a chromophore's molecular structure and its absorption spectrum?
Which of the following best describes the relationship between a chromophore's molecular structure and its absorption spectrum?
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What forms of energy can a molecule store?
What forms of energy can a molecule store?
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What is the significance of energy quantization in molecular energy levels?
What is the significance of energy quantization in molecular energy levels?
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During therapeutic applications, what happens to the light absorbed by biological tissue?
During therapeutic applications, what happens to the light absorbed by biological tissue?
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What is the nature of the absorption spectra of different chromophores?
What is the nature of the absorption spectra of different chromophores?
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Which form of energy is typically associated with a molecule when it becomes excited after absorbing light?
Which form of energy is typically associated with a molecule when it becomes excited after absorbing light?
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Which statement about energy levels in molecules is accurate?
Which statement about energy levels in molecules is accurate?
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What role does thermal equilibrium play in molecular energy levels?
What role does thermal equilibrium play in molecular energy levels?
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What does the emission spectrum of a gas contain?
What does the emission spectrum of a gas contain?
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What is spectral broadening?
What is spectral broadening?
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What characterizes the line shape function near the resonance frequency?
What characterizes the line shape function near the resonance frequency?
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In biological tissues, what is a significant reason for the absorption spectra to vary smoothly?
In biological tissues, what is a significant reason for the absorption spectra to vary smoothly?
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Why might gas absorption lines be distinct?
Why might gas absorption lines be distinct?
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Which statement about non-homogeneous biological tissues is true?
Which statement about non-homogeneous biological tissues is true?
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What is typically true about absorption at wavelengths slightly different from the resonance frequency?
What is typically true about absorption at wavelengths slightly different from the resonance frequency?
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What can influence the shape of the absorption spectrum in biomolecules?
What can influence the shape of the absorption spectrum in biomolecules?
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How are absorption lines in gas determined?
How are absorption lines in gas determined?
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What is a likely characteristic of a line shape function?
What is a likely characteristic of a line shape function?
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Study Notes
Optical Absorption
- Biological tissues are composed of various molecules, including water, proteins, lipids, DNA, etc.
- Light absorption by tissue occurs when light interacts with specific molecules within the tissue.
- These absorbing molecules are called chromophores.
- Different chromophores have distinct absorption spectra, meaning they absorb different wavelengths of light to varying degrees.
- Absorption spectra differences arise from variations in the molecular/atomic structure of the chromophores.
Molecular Energy Levels
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Energy exists in various forms, broadly categorized as kinetic and potential energy.
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Kinetic energy is related to an object's or system's motion.
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Potential energy is connected to the position of an object or system.
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In tissue optics, light absorption leads to an increase in the internal energy of molecules.
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This internal energy can then result in thermal or chemical effects.
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Molecules store energy in fixed amounts, termed energy levels, not arbitrary amounts.
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A molecule stores energy in various forms, including rotational kinetic, vibrational (potential & kinetic), translational kinetic (if the molecules are free to move within a fluid), and electronic potential energy.
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Energy level structures determine a molecule's absorption spectrum.
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Internal energy encompasses all types of molecular energy.
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The kinetic component of the internal energy is associated with thermal motion and correlates with temperature when observed macroscopically.
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Rotational kinetic energy relates to the rotation of a molecule or parts of a molecule held together by a bond that allows them to rotate relative to each other.
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Rotational energy transitions typically absorb low-energy photons in the microwave region of the EM spectrum.
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Vibrational energy arises when different parts of a molecule vibrate with respect to each other due to the elastic nature of the bonds holding constituent atoms together.
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Vibrational energy transitions absorb higher energy photons than rotational transitions, typically in the near-infrared or red end of the visible spectrum.
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Electronic energy levels describe the potential energy of electrons in relation to their distance from the atomic nucleus. Transitions between electronic energy levels require much higher energy than vibrational transitions and involve UV or X-ray photons.
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Excitation of electrons typically leads to photochemical reactions.
Light Absorption and Resonance Absorption
- Light absorption is a typical property of vibrating systems, occurring most effectively when the light's frequency matches the system's natural frequency (resonance).
- In tissue optics, the light's energy transfer into the molecule depends on the correspondence between the light's frequency and the molecule's natural frequency.
- Absorption is highly probable when the light's photon energy matches the difference between the molecule's current and excited states.
- Absorption processes generally occur on a very short timescale (femtoseconds).
Absorption Spectra
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Emission spectra of gases display narrow peaks of strong emission corresponding to specific frequencies (wavelengths or photon energies).
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Strong absorption lines often occur at the same frequencies (wavelengths or photon energies) as those in the emission spectra.
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However, in practice, these lines are not infinitely narrow but exhibit a finite probability of absorbing light at wavelengths slightly different from the resonance frequency – this phenomenon is known as spectral broadening.
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For large and complex biomolecules, the absorption spectra have more smoothly varying characteristics instead of distinct peaks, primarily due to various vibrational energy levels between electronic levels.
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Absorption spectra reflect the presence of various chromophores(different molecules absorbing light), such as water, hemoglobin, melanin, and lipids.
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Endogenous absorbers are molecules naturally present, in contrast to exogeneous absorbers which are externally introduced, like contrast agents or tattoos.
Near Infrared Window
- The near-infrared range, between approximately 650–1300 nm, is often referred to as the "near-infrared window."
- Within this spectral range, light penetration into tissue is more significant because endogenous absorbers, such as water and hemoglobin, display relatively low absorption.
- At these wavelengths, optical scattering is still present but does not hinder light penetration to the same extent as at shorter wavelengths.
Absorption Coefficient
- For a photon of a given frequency, the probability of a molecule undergoing a state transition from 'a' to 'b' is often expressed using the absorption cross-section.
- Absorption cross-section is the ratio of the absorbed power to incident power and is measured in units of area.
- Molar absorption coefficient is a material property.
- It is calculated by combining the absorption cross-sections of all molecules in one mole of a compound.
- The total absorption coefficient of a material composed of multiple chromophores is calculated as the sum of the individual absorption coefficients, weighted by their respective concentrations.
Other
- Nonlinear effects, such as multiphoton absorption, depletion, saturation, and photostability, are included, but not detailed.
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Description
This quiz explores the interaction of light with biological tissues, focusing on optical absorption and the role of chromophores. It delves into how energy exists in various forms and the implications of energy absorption in biological contexts. Understand the distinct absorption spectra and energy levels relevant to molecular structures.