Podcast
Questions and Answers
If a newly discovered virus contains uracil but not thymine as one of its nitrogenous bases, which type of nucleic acid is most likely to make up its genome?
If a newly discovered virus contains uracil but not thymine as one of its nitrogenous bases, which type of nucleic acid is most likely to make up its genome?
- Peptide nucleic acid
- Single-stranded DNA
- Double-stranded DNA
- Ribonucleic acid (correct)
Which of the following is a critical function of nucleic acids in living organisms?
Which of the following is a critical function of nucleic acids in living organisms?
- Catalyzing metabolic reactions as enzymes
- Encoding and transmitting genetic information (correct)
- Storing energy for cellular activities
- Providing structural support within cells
A nucleotide is composed of which of the following?
A nucleotide is composed of which of the following?
- A pentose sugar and a phosphate group
- A nitrogenous base and a phosphate group
- A nitrogenous base, a pentose sugar, and a phosphate group (correct)
- A pentose sugar and a nitrogenous base
How does the pentose sugar in DNA differ from the pentose sugar in RNA?
How does the pentose sugar in DNA differ from the pentose sugar in RNA?
An unknown molecule is found to contain a nitrogenous base, a pentose sugar, but no phosphate group. What is this molecule most likely to be?
An unknown molecule is found to contain a nitrogenous base, a pentose sugar, but no phosphate group. What is this molecule most likely to be?
A DNA sequence described as a palindrome contains inverted repeats with what kind of symmetry?
A DNA sequence described as a palindrome contains inverted repeats with what kind of symmetry?
Which of the following nitrogenous bases is a purine?
Which of the following nitrogenous bases is a purine?
Mirror repeats differ from palindromes in that mirror repeats:
Mirror repeats differ from palindromes in that mirror repeats:
What is the function of messenger RNA (mRNA) as proposed by Jacob and Monod?
What is the function of messenger RNA (mRNA) as proposed by Jacob and Monod?
Which of the following statements accurately describes the role of functional nucleotides such as ATP?
Which of the following statements accurately describes the role of functional nucleotides such as ATP?
Which of the following best describes the relationship between nucleic acids and proteins within a cell?
Which of the following best describes the relationship between nucleic acids and proteins within a cell?
The process of transcription can be best described as:
The process of transcription can be best described as:
Which of the following best describe a monocistronic mRNA?
Which of the following best describe a monocistronic mRNA?
How does a polycistronic mRNA differ from a monocistronic mRNA?
How does a polycistronic mRNA differ from a monocistronic mRNA?
Which cellular component or process is directly linked to an increase in cytoplasmic RNA?
Which cellular component or process is directly linked to an increase in cytoplasmic RNA?
What structural feature is associated with palindromic DNA sequences due to their self-complementary nature?
What structural feature is associated with palindromic DNA sequences due to their self-complementary nature?
Which statement accurately describes the arrangement of the two DNA strands in a double helix?
Which statement accurately describes the arrangement of the two DNA strands in a double helix?
What type of bond connects complementary bases in a DNA double helix?
What type of bond connects complementary bases in a DNA double helix?
According to Chargaff's rules, if a DNA molecule contains 20% Adenine, what percentage of Guanine would be present?
According to Chargaff's rules, if a DNA molecule contains 20% Adenine, what percentage of Guanine would be present?
Which of the following contributes most significantly to the stability of the DNA double helix, aside from hydrogen bonding?
Which of the following contributes most significantly to the stability of the DNA double helix, aside from hydrogen bonding?
In the tertiary structure of DNA, where are the hydrophilic components located?
In the tertiary structure of DNA, where are the hydrophilic components located?
What is the primary difference between the 5' and 3' ends of a DNA strand?
What is the primary difference between the 5' and 3' ends of a DNA strand?
If a mutation resulted in a DNA strand where adenine (A) was replaced by guanine (G), which of the following consequences is most likely?
If a mutation resulted in a DNA strand where adenine (A) was replaced by guanine (G), which of the following consequences is most likely?
Which of the following is NOT a characteristic of the DNA double helix?
Which of the following is NOT a characteristic of the DNA double helix?
What primarily dictates the minimum length of an mRNA molecule?
What primarily dictates the minimum length of an mRNA molecule?
If a scientist discovers a mutation that significantly reduces the stability of DNA, which aspect of its role would be most compromised?
If a scientist discovers a mutation that significantly reduces the stability of DNA, which aspect of its role would be most compromised?
In the context of DNA's tertiary structure, what is the significance of the major and minor grooves?
In the context of DNA's tertiary structure, what is the significance of the major and minor grooves?
How does the arrangement of deoxyribose and phosphate groups in the DNA double helix contribute to its stability in an aqueous environment?
How does the arrangement of deoxyribose and phosphate groups in the DNA double helix contribute to its stability in an aqueous environment?
What is the primary role of chromatin in eukaryotic cells?
What is the primary role of chromatin in eukaryotic cells?
At which level of chromatin organization does the nucleosome represent?
At which level of chromatin organization does the nucleosome represent?
If a drug prevented the formation of proper chromatin structure, which cellular process would be most directly affected?
If a drug prevented the formation of proper chromatin structure, which cellular process would be most directly affected?
During DNA replication, an error occurs where guanine is inserted instead of adenine on one strand. What will be the corresponding base on the complementary strand after replication?
During DNA replication, an error occurs where guanine is inserted instead of adenine on one strand. What will be the corresponding base on the complementary strand after replication?
Why is thymine, rather than uracil, typically found in DNA?
Why is thymine, rather than uracil, typically found in DNA?
What would be the long-term consequence if cytosine deamination was not effectively repaired in DNA?
What would be the long-term consequence if cytosine deamination was not effectively repaired in DNA?
What is the primary consequence of an AP site (apurinic/apyrimidinic site) in DNA?
What is the primary consequence of an AP site (apurinic/apyrimidinic site) in DNA?
Why is depurination of ribonucleotides in RNA generally considered physiologically insignificant compared to depurination in DNA?
Why is depurination of ribonucleotides in RNA generally considered physiologically insignificant compared to depurination in DNA?
What type of DNA damage is most likely to result from exposure to UV light?
What type of DNA damage is most likely to result from exposure to UV light?
How does ionizing radiation (e.g., X-rays and gamma rays) primarily damage DNA?
How does ionizing radiation (e.g., X-rays and gamma rays) primarily damage DNA?
Incubating DNA at pH 3 causes selective removal of the purine bases, resulting in a derivative called apurinic acid. Why does acidic pH cause this?
Incubating DNA at pH 3 causes selective removal of the purine bases, resulting in a derivative called apurinic acid. Why does acidic pH cause this?
Suppose a cell has a mutation that impairs its ability to repair cyclobutane pyrimidine dimers. What is the most likely consequence of this mutation if the cell is exposed to UV radiation?
Suppose a cell has a mutation that impairs its ability to repair cyclobutane pyrimidine dimers. What is the most likely consequence of this mutation if the cell is exposed to UV radiation?
Why is RNA susceptible to hydrolysis in an alkaline environment, while DNA is resistant?
Why is RNA susceptible to hydrolysis in an alkaline environment, while DNA is resistant?
What is the primary outcome of mild acid hydrolysis (pH about 3) on a polynucleotide?
What is the primary outcome of mild acid hydrolysis (pH about 3) on a polynucleotide?
What impact does the use of hydrazine have on nucleic acids?
What impact does the use of hydrazine have on nucleic acids?
During the determination of a base ratio in a polynucleotide, why is it important to carefully consider cytosine deamination?
During the determination of a base ratio in a polynucleotide, why is it important to carefully consider cytosine deamination?
How do 3'- and 5'-exonucleases differ in their mechanism of action?
How do 3'- and 5'-exonucleases differ in their mechanism of action?
What distinguishes endonucleases from exonucleases in their cleavage activity on nucleic acids?
What distinguishes endonucleases from exonucleases in their cleavage activity on nucleic acids?
How does the cleavage specificity of pancreatic RNase differ from that of RNase T1?
How does the cleavage specificity of pancreatic RNase differ from that of RNase T1?
What is the distinguishing feature of restriction endonucleases regarding their activity on DNA?
What is the distinguishing feature of restriction endonucleases regarding their activity on DNA?
Flashcards
Nucleic Acids
Nucleic Acids
Macromolecules essential for all life forms that encode and express genetic information.
DNA
DNA
Deoxyribonucleic acid, a type of nucleic acid that carries genetic information in cells.
RNA
RNA
Ribonucleic acid, a nucleic acid involved in protein synthesis and carrying genetic information.
Nucleotide
Nucleotide
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Nitrogenous Bases
Nitrogenous Bases
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Purines
Purines
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Pyrimidines
Pyrimidines
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Nucleoside
Nucleoside
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Palindrome
Palindrome
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Inverted Repeats
Inverted Repeats
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Hairpin Structure
Hairpin Structure
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Cruciform Structure
Cruciform Structure
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Mirror Repeat
Mirror Repeat
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Messenger RNA (mRNA)
Messenger RNA (mRNA)
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Transcription
Transcription
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Monocistronic vs Polycistronic
Monocistronic vs Polycistronic
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Phosphodiester linkage
Phosphodiester linkage
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5'-phosphate and 3'-OH ends
5'-phosphate and 3'-OH ends
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Base pairing
Base pairing
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Antiparallel strands
Antiparallel strands
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Chargaff's rule
Chargaff's rule
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Double helix structure
Double helix structure
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Hydrogen bonding
Hydrogen bonding
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Base-stacking interactions
Base-stacking interactions
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mRNA length
mRNA length
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Noncoding RNA
Noncoding RNA
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Tertiary structure of DNA
Tertiary structure of DNA
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Antiparallel DNA strands
Antiparallel DNA strands
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Hydrophilic backbone
Hydrophilic backbone
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Chromatin
Chromatin
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Chemical stability of DNA
Chemical stability of DNA
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Cytosine Deamination
Cytosine Deamination
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Thymine's Role
Thymine's Role
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AP Site
AP Site
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Depurination Rate
Depurination Rate
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Cyclobutane Dimers
Cyclobutane Dimers
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6-4 Photoproducts
6-4 Photoproducts
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Repair System For Uracil
Repair System For Uracil
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Radiation Effects on DNA
Radiation Effects on DNA
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Cyclic 2',3'-phosphate
Cyclic 2',3'-phosphate
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Acid hydrolysis
Acid hydrolysis
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Exonucleases
Exonucleases
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Endonucleases
Endonucleases
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RNases
RNases
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DNases
DNases
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Restriction endonucleases
Restriction endonucleases
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Study Notes
Nucleic Acids
- Nucleic acids are macromolecules essential for all life forms, encoding, transmitting, and expressing genetic information.
- They are polymers of nucleotide monomers, each composed of a nitrogenous base, a 5-carbon sugar, and a phosphate group.
- Divided into DNA (deoxyribonucleic acid) and RNA (ribonucleic acid).
Structure of Nucleotides
- Nucleotides are the building blocks of nucleic acids.
- They have three components: a nitrogenous base, a pentose (5-carbon sugar), and a phosphate group.
- A nucleoside lacks the phosphate group.
- Nitrogenous bases are divided into Purines (adenine (A) and guanine (G), two-ring structure) and Pyrimidines (thymine (T), cytosine (C), and uracil (U), one-ring structure). DNA contains A, G, T, and C; RNA contains A, G, U, and C.
Roles of Functional Nucleotides
- Components of DNA and RNA.
- Energy currency (mostly ATP).
- Chemical links in cellular responses to hormones (e.g., cAMP).
- Structural components of enzyme cofactors and metabolic intermediates (e.g., NAD+, FAD, FMN).
- Derivatives of nucleotides:
- NAD+/NADH, NADP+/NADPH, FAD/FADH2, FMN/FMNH2, cAMP, cGMP.
DNA Primary Structure
- Phosphodiester bonds link successive nucleotides.
- The 5'-phosphate group of one nucleotide is linked to the 3'-hydroxyl group of the next.
- The DNA or RNA strands have 5' and 3' ends (phosphate end and hydroxyl end).
DNA Secondary Structure
- Double helix structure with two strands.
- Hydrogen bonds between complementary base pairs (A-T and G-C): A-T have two hydrogen bonds and G-C have three hydrogen bonds.
- Antiparallel strands, running in opposite directions.
- Base stacking interactions contribute to stability.
DNA Tertiary Structure
- Various three-dimensional shapes.
- Major and minor grooves.
- Forms like B-DNA, A-DNA, and Z-DNA.
DNA Denaturation
- DNA denaturation (melting) is the separation of DNA strands.
- Factors influencing denaturation include high temperatures, extreme pH, and certain chemicals.
- Higher G-C content results in higher melting temperatures.
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