Podcast
Questions and Answers
What are the two basic components of neoplasms?
What are the two basic components of neoplasms?
Clonal cells and reactive stroma.
How do benign tumors differ from malignant tumors?
How do benign tumors differ from malignant tumors?
Benign tumors are localized and do not metastasize, whereas malignant tumors can invade locally and spread to distant sites.
What role does reactive stroma play in neoplasms?
What role does reactive stroma play in neoplasms?
Reactive stroma influences tumor growth and the response to therapies.
What are the histological differences between Squamous Cell Carcinoma and Basal Cell Carcinoma?
What are the histological differences between Squamous Cell Carcinoma and Basal Cell Carcinoma?
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Describe the significance of morphology in tumor classification.
Describe the significance of morphology in tumor classification.
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What is the relationship between colonic adenomas and colorectal carcinoma?
What is the relationship between colonic adenomas and colorectal carcinoma?
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What types of tumors are classified as hematopoietic tumors?
What types of tumors are classified as hematopoietic tumors?
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What is the importance of immunohistochemistry in tumor classification?
What is the importance of immunohistochemistry in tumor classification?
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What are the three components evaluated in the Nottingham Grading System for breast cancer?
What are the three components evaluated in the Nottingham Grading System for breast cancer?
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How does the Gleason Scoring System determine the aggressiveness of prostate cancer?
How does the Gleason Scoring System determine the aggressiveness of prostate cancer?
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What does a lower grade in tumor grading systems typically suggest about a patient's prognosis?
What does a lower grade in tumor grading systems typically suggest about a patient's prognosis?
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What are the four mechanisms by which tumors metastasize?
What are the four mechanisms by which tumors metastasize?
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Why is early detection significant in cancer treatment?
Why is early detection significant in cancer treatment?
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What complication can arise from tumor spread in body cavities like the peritoneal space?
What complication can arise from tumor spread in body cavities like the peritoneal space?
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How does the AJCC Staging System classify cancer?
How does the AJCC Staging System classify cancer?
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What does the term 'iatrogenic spread' refer to in the context of tumor spread?
What does the term 'iatrogenic spread' refer to in the context of tumor spread?
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What clinical relevance does tumor grading and staging have on treatment decisions?
What clinical relevance does tumor grading and staging have on treatment decisions?
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In the Gleason Scoring System, what does a score of 7 indicate?
In the Gleason Scoring System, what does a score of 7 indicate?
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What role does angiogenesis play in the survival of metastasized tumors?
What role does angiogenesis play in the survival of metastasized tumors?
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What is the significance of tumor tattooing during a core biopsy?
What is the significance of tumor tattooing during a core biopsy?
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What can bone metastases lead to in patients?
What can bone metastases lead to in patients?
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How have recent revisions in staging criteria for thyroid cancer altered the focus of assessment?
How have recent revisions in staging criteria for thyroid cancer altered the focus of assessment?
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How does chronic inflammation contribute to cancer development?
How does chronic inflammation contribute to cancer development?
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What is the role of driver mutations in cancer?
What is the role of driver mutations in cancer?
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What distinguishes passenger mutations from driver mutations?
What distinguishes passenger mutations from driver mutations?
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Why is pancreatic cancer associated with high mortality rates?
Why is pancreatic cancer associated with high mortality rates?
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How do oncogenes contribute to cancer?
How do oncogenes contribute to cancer?
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What is meant by tumor heterogeneity?
What is meant by tumor heterogeneity?
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Explain the concept of senescent cells in relation to cancer recurrence.
Explain the concept of senescent cells in relation to cancer recurrence.
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How does the microenvironment influence cancer development?
How does the microenvironment influence cancer development?
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What is the significance of cell division in the context of mutations?
What is the significance of cell division in the context of mutations?
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What are the implications of tumor adaptations on therapeutic approaches?
What are the implications of tumor adaptations on therapeutic approaches?
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Why is understanding the aetiology of carcinogenesis important?
Why is understanding the aetiology of carcinogenesis important?
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How do screening programs aim to reduce cancer mortality?
How do screening programs aim to reduce cancer mortality?
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What is the effect of the immune system on cancer development?
What is the effect of the immune system on cancer development?
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What are tumor suppressor genes and their role in cancer?
What are tumor suppressor genes and their role in cancer?
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What makes squamous cell carcinoma (SCC) more concerning in terms of prognosis compared to basal cell carcinoma (BCC)?
What makes squamous cell carcinoma (SCC) more concerning in terms of prognosis compared to basal cell carcinoma (BCC)?
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Describe the typical management approach for basal cell carcinoma (BCC).
Describe the typical management approach for basal cell carcinoma (BCC).
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What is the significance of tumor mutational burden in targeted therapy?
What is the significance of tumor mutational burden in targeted therapy?
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How are tumors classified by biological behavior?
How are tumors classified by biological behavior?
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Give an example of a benign neoplasm and describe its characteristics.
Give an example of a benign neoplasm and describe its characteristics.
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What are the characteristics that define anaplasia in tumor cells?
What are the characteristics that define anaplasia in tumor cells?
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What is metaplasia and provide an example?
What is metaplasia and provide an example?
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How does dysplasia differ from metaplasia?
How does dysplasia differ from metaplasia?
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What is the role of the WHO Blue Books in tumor classification?
What is the role of the WHO Blue Books in tumor classification?
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What defines a malignant neoplasm, such as adenocarcinoma?
What defines a malignant neoplasm, such as adenocarcinoma?
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Describe the appearance of an anaplastic tumor cell.
Describe the appearance of an anaplastic tumor cell.
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What is Familial Adenomatous Polyposis (FAP) and its clinical significance?
What is Familial Adenomatous Polyposis (FAP) and its clinical significance?
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What factors potentially influence the reversibility of metaplasia?
What factors potentially influence the reversibility of metaplasia?
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Explain the significance of tumor-agnostic biomarkers in cancer treatment.
Explain the significance of tumor-agnostic biomarkers in cancer treatment.
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What are typical imaging and diagnostic methods used for neoplasia?
What are typical imaging and diagnostic methods used for neoplasia?
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What role does the immune system play in the presence of pre-cancerous mutations in non-cancerous eyelid skin?
What role does the immune system play in the presence of pre-cancerous mutations in non-cancerous eyelid skin?
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Which types of HPV are most commonly associated with cervical cancer, and what percentage of cases do they account for?
Which types of HPV are most commonly associated with cervical cancer, and what percentage of cases do they account for?
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What is the significance of gene expression in determining the identity of different cell types despite the presence of the same DNA?
What is the significance of gene expression in determining the identity of different cell types despite the presence of the same DNA?
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What are enhancers and how do they influence gene transcription?
What are enhancers and how do they influence gene transcription?
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Explain the role of transcription factors in the regulation of gene expression.
Explain the role of transcription factors in the regulation of gene expression.
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What is the difference between spatial and temporal regulation in gene expression?
What is the difference between spatial and temporal regulation in gene expression?
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What is post-transcriptional regulation and what are its main components?
What is post-transcriptional regulation and what are its main components?
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Describe the process and significance of alternative splicing.
Describe the process and significance of alternative splicing.
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How does mRNA stability affect gene expression?
How does mRNA stability affect gene expression?
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What is the role of non-coding RNA in the genome?
What is the role of non-coding RNA in the genome?
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How do miRNAs regulate gene expression post-transcriptionally?
How do miRNAs regulate gene expression post-transcriptionally?
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Describe the translation process and its components.
Describe the translation process and its components.
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What is the significance of having 5' capping and poly-A tail in mRNA?
What is the significance of having 5' capping and poly-A tail in mRNA?
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Explain how ribosomes contribute to protein synthesis.
Explain how ribosomes contribute to protein synthesis.
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What is MYC addiction and its significance in tumors?
What is MYC addiction and its significance in tumors?
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What role do Ras proteins play in cancer development?
What role do Ras proteins play in cancer development?
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How do tumor suppressor genes function in relation to cell proliferation?
How do tumor suppressor genes function in relation to cell proliferation?
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What is meant by the 'two-hit' effect concerning tumor suppressor genes?
What is meant by the 'two-hit' effect concerning tumor suppressor genes?
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Explain how genomic instability relates to tumor progression.
Explain how genomic instability relates to tumor progression.
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What types of mutations can contribute to cancer, and which are more common?
What types of mutations can contribute to cancer, and which are more common?
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How does random mutation facilitate carcinogenesis?
How does random mutation facilitate carcinogenesis?
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What distinguishes oncogenes from tumor suppressor genes?
What distinguishes oncogenes from tumor suppressor genes?
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Describe how hereditary mutations can lead to cancer susceptibility.
Describe how hereditary mutations can lead to cancer susceptibility.
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Discuss the impact of UV radiation on skin cancer development.
Discuss the impact of UV radiation on skin cancer development.
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What role does the immune system play in managing UV-induced skin damage?
What role does the immune system play in managing UV-induced skin damage?
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Explain the significance of the 'Philadelphia chromosome' in leukemia.
Explain the significance of the 'Philadelphia chromosome' in leukemia.
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Describe how tumor heterogeneity complicates cancer treatment.
Describe how tumor heterogeneity complicates cancer treatment.
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What are the consequences of mutations in the Ras signaling pathway?
What are the consequences of mutations in the Ras signaling pathway?
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How does alcohol consumption enhance cancer risk?
How does alcohol consumption enhance cancer risk?
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What is the role of microRNAs in translation regulation?
What is the role of microRNAs in translation regulation?
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How do translation initiation factors influence translation efficiency?
How do translation initiation factors influence translation efficiency?
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Explain the significance of tRNA heterogeneity and codon usage bias.
Explain the significance of tRNA heterogeneity and codon usage bias.
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What are chaperones and their role in protein folding?
What are chaperones and their role in protein folding?
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Define phosphorylation and its relevance in cancer research.
Define phosphorylation and its relevance in cancer research.
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Describe the concept of epigenetic regulation.
Describe the concept of epigenetic regulation.
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What is the effect of DNA methylation on gene expression?
What is the effect of DNA methylation on gene expression?
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How do histone modifications impact chromatin structure?
How do histone modifications impact chromatin structure?
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What are histone deacetylases (HDACs) and their implications in cancer?
What are histone deacetylases (HDACs) and their implications in cancer?
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How does cancer typically originate at the cellular level?
How does cancer typically originate at the cellular level?
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What are the stages of tumor development?
What are the stages of tumor development?
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How do mutations in coding regions differ from those in non-coding regions?
How do mutations in coding regions differ from those in non-coding regions?
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What is the relationship between dysregulated gene expression and cancer?
What is the relationship between dysregulated gene expression and cancer?
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What are some common post-translational modifications?
What are some common post-translational modifications?
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How do mutations in proto-oncogenes contribute to cancer?
How do mutations in proto-oncogenes contribute to cancer?
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What is the role of tumor suppressor genes in cancer prevention?
What is the role of tumor suppressor genes in cancer prevention?
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What is epithelial-mesenchymal transition (EMT) and its significance in cancer?
What is epithelial-mesenchymal transition (EMT) and its significance in cancer?
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How can gene expression profiling aid in breast cancer treatment?
How can gene expression profiling aid in breast cancer treatment?
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Why is tumor heterogeneity a significant challenge in cancer treatment?
Why is tumor heterogeneity a significant challenge in cancer treatment?
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Explain the impact of post-transcriptional dysregulation on cancer progression.
Explain the impact of post-transcriptional dysregulation on cancer progression.
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What are the implications of using platelets for gene expression profiling in myelofibrosis?
What are the implications of using platelets for gene expression profiling in myelofibrosis?
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What mechanisms contribute to clonal heterogeneity in tumors?
What mechanisms contribute to clonal heterogeneity in tumors?
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Describe how oncogenes are related to cancer proliferation.
Describe how oncogenes are related to cancer proliferation.
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Discuss the importance of molecular profiling in advancing personalized medicine for cancer.
Discuss the importance of molecular profiling in advancing personalized medicine for cancer.
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How does alternative splicing contribute to cancer progression?
How does alternative splicing contribute to cancer progression?
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In what way can tumor suppressor genes be lost in cancer cells?
In what way can tumor suppressor genes be lost in cancer cells?
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What practical role does gene expression profiling play in understanding breast cancer subtypes?
What practical role does gene expression profiling play in understanding breast cancer subtypes?
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What is the significance of understanding gene expression alterations in cancer therapy?
What is the significance of understanding gene expression alterations in cancer therapy?
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What are BRAF inhibitors used for in cancer treatment?
What are BRAF inhibitors used for in cancer treatment?
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How do AKT inhibitors contribute to cancer therapy?
How do AKT inhibitors contribute to cancer therapy?
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What role do combination therapies play in overcoming resistance?
What role do combination therapies play in overcoming resistance?
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Why is hyperactivation of signaling pathways significant in cancer development?
Why is hyperactivation of signaling pathways significant in cancer development?
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What is the significance of the PI3K-AKT pathway in cancer?
What is the significance of the PI3K-AKT pathway in cancer?
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What is the function of Gleevec in cancer treatment?
What is the function of Gleevec in cancer treatment?
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What are the implications of resistance mechanisms in targeted cancer therapies?
What are the implications of resistance mechanisms in targeted cancer therapies?
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What is the impact of ongoing research on cancer therapies?
What is the impact of ongoing research on cancer therapies?
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What is the purpose of age standardization in cancer epidemiology?
What is the purpose of age standardization in cancer epidemiology?
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How did the age-standardized incidence rate of all cancers change from 1982 to 2021?
How did the age-standardized incidence rate of all cancers change from 1982 to 2021?
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What are some common reasons for the increase in breast and prostate cancer rates?
What are some common reasons for the increase in breast and prostate cancer rates?
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What factor is primarily responsible for the increase in mesothelioma cases?
What factor is primarily responsible for the increase in mesothelioma cases?
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How does smoking impact lung cancer rates, based on historical trends?
How does smoking impact lung cancer rates, based on historical trends?
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At what age does screening for bowel cancer typically begin?
At what age does screening for bowel cancer typically begin?
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What is the main difference between screening tests and diagnostic tests?
What is the main difference between screening tests and diagnostic tests?
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What is a key limitation of cancer screening programs?
What is a key limitation of cancer screening programs?
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What is the survival rate trend for cancers from the mid-1980s to recent years?
What is the survival rate trend for cancers from the mid-1980s to recent years?
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Why is it significant that the PSA test is used unofficially for prostate cancer screening?
Why is it significant that the PSA test is used unofficially for prostate cancer screening?
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What is the primary aim of cancer screening programs?
What is the primary aim of cancer screening programs?
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How has technological advancement impacted cancer diagnosis and incidence rates?
How has technological advancement impacted cancer diagnosis and incidence rates?
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What age group is cervical cancer screening generally recommended to start?
What age group is cervical cancer screening generally recommended to start?
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What is a reason for the increased incidence of melanoma linked to sunshine exposure?
What is a reason for the increased incidence of melanoma linked to sunshine exposure?
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What is the primary purpose of analytical epidemiology?
What is the primary purpose of analytical epidemiology?
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Explain the difference between association and causation in epidemiology.
Explain the difference between association and causation in epidemiology.
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What key feature distinguishes case-control studies from cohort studies?
What key feature distinguishes case-control studies from cohort studies?
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What is ecological fallacy, and why is it a limitation in ecological studies?
What is ecological fallacy, and why is it a limitation in ecological studies?
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How do randomized controlled trials ensure a robust assessment of causation?
How do randomized controlled trials ensure a robust assessment of causation?
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What is the significance of the odds ratio in case-control studies?
What is the significance of the odds ratio in case-control studies?
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Identify one strength and one limitation of case-control studies.
Identify one strength and one limitation of case-control studies.
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What role do screening programs play in disease management?
What role do screening programs play in disease management?
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What is a cohort in the context of cohort studies?
What is a cohort in the context of cohort studies?
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Why is the consideration of comparison groups essential in analytical epidemiology?
Why is the consideration of comparison groups essential in analytical epidemiology?
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What are PFAs, and why are they significant in cancer epidemiology?
What are PFAs, and why are they significant in cancer epidemiology?
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Describe a limitation of ecological studies in establishing causal relationships.
Describe a limitation of ecological studies in establishing causal relationships.
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What are microRNAs and how do they affect gene expression?
What are microRNAs and how do they affect gene expression?
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Explain the role of long non-coding RNAs (lncRNAs) in gene regulation.
Explain the role of long non-coding RNAs (lncRNAs) in gene regulation.
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How do cohort studies contribute to understanding disease causation?
How do cohort studies contribute to understanding disease causation?
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What advantage do case-control studies offer when researching diseases with long latency?
What advantage do case-control studies offer when researching diseases with long latency?
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Describe the significance of transcription factor mutations in cancer.
Describe the significance of transcription factor mutations in cancer.
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What is descriptive epidemiology and what does it focus on?
What is descriptive epidemiology and what does it focus on?
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Differentiate between incidence and prevalence.
Differentiate between incidence and prevalence.
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How does age affect cancer incidence?
How does age affect cancer incidence?
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What does cumulative incidence measure?
What does cumulative incidence measure?
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Explain what age-standardized rates are and why they are used.
Explain what age-standardized rates are and why they are used.
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Outline the main purpose of analytical epidemiology.
Outline the main purpose of analytical epidemiology.
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What is the significance of microRNA-RISC complex in gene expression?
What is the significance of microRNA-RISC complex in gene expression?
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How do circular RNAs (circRNAs) influence gene expression?
How do circular RNAs (circRNAs) influence gene expression?
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Identify the two main principles of epidemiology.
Identify the two main principles of epidemiology.
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What is meant by the term 'population at risk' in epidemiological studies?
What is meant by the term 'population at risk' in epidemiological studies?
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What is angiogenesis and its role in tumor growth?
What is angiogenesis and its role in tumor growth?
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What are the two primary pathways involved in signal transduction?
What are the two primary pathways involved in signal transduction?
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Why is the distinction between crude incidence rate and age-standardized incidence rate important?
Why is the distinction between crude incidence rate and age-standardized incidence rate important?
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Define the function of second messengers in signal transduction.
Define the function of second messengers in signal transduction.
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What roles do kinases and phosphatases play in cellular signaling?
What roles do kinases and phosphatases play in cellular signaling?
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Explain the importance of the Epidermal Growth Factor (EGF) in cancer biology.
Explain the importance of the Epidermal Growth Factor (EGF) in cancer biology.
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What characterizes G-Protein Coupled Receptors (GPCRs) in cellular processes?
What characterizes G-Protein Coupled Receptors (GPCRs) in cellular processes?
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How does the JAK-STAT pathway operate upon cytokine binding?
How does the JAK-STAT pathway operate upon cytokine binding?
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Describe the impact of receptor tyrosine kinases in cancer progression.
Describe the impact of receptor tyrosine kinases in cancer progression.
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What is the role of transcription factors in signal transduction?
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Identify one example of a common ligand involved in cancer signaling.
Identify one example of a common ligand involved in cancer signaling.
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What mechanism does the Ras-Raf-MEK-ERK pathway illustrate in cancer cells?
What mechanism does the Ras-Raf-MEK-ERK pathway illustrate in cancer cells?
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How do hormones act as ligands in the context of cell signaling?
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What is the significance of cross-talk in signaling circuits?
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Explain how intracellular receptors differ from cell surface receptors.
Explain how intracellular receptors differ from cell surface receptors.
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What is a primary strength of cohort studies in epidemiological research?
What is a primary strength of cohort studies in epidemiological research?
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How can cohort studies be beneficial for studying rare exposures?
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What is one of the limitations associated with cohort studies?
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Identify a common bias that can occur in epidemiological research.
Identify a common bias that can occur in epidemiological research.
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What role does confounding play in epidemiological studies?
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How does the IARC classify Group 2B carcinogens?
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What is the significance of accurate exposure assessment in epidemiological research?
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Explain the term ‘biological gradient’ in establishing causation.
Explain the term ‘biological gradient’ in establishing causation.
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In the context of cancer development, why is signaling transduction important?
In the context of cancer development, why is signaling transduction important?
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What is one of the hallmarks of cancer related to cell proliferation?
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Describe the impact of the Hawthorne effect on epidemiological research.
Describe the impact of the Hawthorne effect on epidemiological research.
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What is the role of statistical models in epidemiological studies?
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How do cohort studies allow for the investigation of multiple outcomes?
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Name a potential challenge related to long follow-up periods in cohort studies.
Name a potential challenge related to long follow-up periods in cohort studies.
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What is the importance of consistency in establishing causation?
What is the importance of consistency in establishing causation?
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What role does AKT play in cell metabolism and survival?
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How do AKT inhibitors induce apoptosis in cancer cells?
How do AKT inhibitors induce apoptosis in cancer cells?
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What is the significance of the BRAF V600E mutation in melanoma?
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What are the key components of the Ras-Raf-MEK-ERK signaling pathway?
What are the key components of the Ras-Raf-MEK-ERK signaling pathway?
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Explain how Gleevec (Imatinib) targets the BCR-ABL fusion protein in CML.
Explain how Gleevec (Imatinib) targets the BCR-ABL fusion protein in CML.
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What are the clinical implications of combining AKT inhibitors with other therapies?
What are the clinical implications of combining AKT inhibitors with other therapies?
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How does the T315I mutation in BCR-ABL lead to resistance against Imatinib?
How does the T315I mutation in BCR-ABL lead to resistance against Imatinib?
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What is the function of mTOR in the AKT signaling pathway?
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What strategies are employed to manage resistance to targeted cancer therapies?
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How does the activation of PI3K contribute to cancer cell survival?
How does the activation of PI3K contribute to cancer cell survival?
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Describe the role of Trametinib in cancer treatment.
Describe the role of Trametinib in cancer treatment.
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What is the importance of targeted therapies based on specific mutations in cancer treatment?
What is the importance of targeted therapies based on specific mutations in cancer treatment?
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In what context is combination therapy particularly significant for treating melanoma?
In what context is combination therapy particularly significant for treating melanoma?
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Explain the role of the pleckstrin homology (PH) domain in AKT activation.
Explain the role of the pleckstrin homology (PH) domain in AKT activation.
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What role does the ras-raf-Erk pathway play in cancer proliferation?
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How does EGFR contribute to the ras-raf-Erk signaling pathway?
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What are the implications of B-RAF mutations in melanoma treatment?
What are the implications of B-RAF mutations in melanoma treatment?
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Which cancers are most commonly associated with mutations in the Ras protein?
Which cancers are most commonly associated with mutations in the Ras protein?
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Describe the JAK-STAT pathway's role in cell signaling.
Describe the JAK-STAT pathway's role in cell signaling.
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What therapeutic strategies can target the ras-raf-Erk pathway?
What therapeutic strategies can target the ras-raf-Erk pathway?
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What resistance mechanisms can occur with therapies targeting B-RAF in melanoma?
What resistance mechanisms can occur with therapies targeting B-RAF in melanoma?
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How does Akt act as a central player in cancer cell viability?
How does Akt act as a central player in cancer cell viability?
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What is the significance of targeting the EGF/EGFR-ras-raf-Erk pathway in cancer therapy?
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What are some common small molecule inhibitors targeting the MEK within the ras-raf-Erk pathway?
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Explain how the activation of the AKT pathway can contribute to cancer.
Explain how the activation of the AKT pathway can contribute to cancer.
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What role do monoclonal antibodies play in cancer treatment targeting the ras-raf-Erk pathway?
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Distinguish between mesenchymal and amoeboid migration in cancer cells.
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Explain the role of HPV's E6 and E7 proteins in cancer development.
Explain the role of HPV's E6 and E7 proteins in cancer development.
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What are the key differences between HPV types associated with benign warts and those associated with cancer?
What are the key differences between HPV types associated with benign warts and those associated with cancer?
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What is the significance of the L1 gene in HPV?
What is the significance of the L1 gene in HPV?
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Describe the interplay between oncogenes and tumor suppressor genes in cancer.
Describe the interplay between oncogenes and tumor suppressor genes in cancer.
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Why is it important to identify the specific HPV serotype in patients?
Why is it important to identify the specific HPV serotype in patients?
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What is the role of the Long Control Region (LCR) in the HPV genome?
What is the role of the Long Control Region (LCR) in the HPV genome?
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How does Epstein-Barr Virus (EBV) contribute to the development of Burkitt lymphoma?
How does Epstein-Barr Virus (EBV) contribute to the development of Burkitt lymphoma?
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What role does the transcription factor TCF-3 play in Burkitt lymphoma?
What role does the transcription factor TCF-3 play in Burkitt lymphoma?
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What association exists between malaria infection and Burkitt lymphoma?
What association exists between malaria infection and Burkitt lymphoma?
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What are the key features of Epstein-Barr Virus (EBV) positivity assessment?
What are the key features of Epstein-Barr Virus (EBV) positivity assessment?
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Describe the mechanism by which HPV contributes to cancer development.
Describe the mechanism by which HPV contributes to cancer development.
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What is the significance of tumor suppressor genes (TSGs) in cancer development?
What is the significance of tumor suppressor genes (TSGs) in cancer development?
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Explain the concept of oncogenes and how they differ from proto-oncogenes.
Explain the concept of oncogenes and how they differ from proto-oncogenes.
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What characterizes the retinoblastoma (RB) gene and its function?
What characterizes the retinoblastoma (RB) gene and its function?
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What is the significance of Gardasil in cancer prevention?
What is the significance of Gardasil in cancer prevention?
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How do chronic infections like malaria influence cancer risk?
How do chronic infections like malaria influence cancer risk?
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What is the relationship between oncogenes and malignant phenotypes?
What is the relationship between oncogenes and malignant phenotypes?
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Explain the concept of mutations in the context of tumor suppressor genes.
Explain the concept of mutations in the context of tumor suppressor genes.
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What expression pattern is noted in EBV-associated nasopharyngeal carcinoma?
What expression pattern is noted in EBV-associated nasopharyngeal carcinoma?
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What impacts can viral oncoproteins have on cellular mechanisms?
What impacts can viral oncoproteins have on cellular mechanisms?
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What is the role of E6 and E7 in the viral oncogenesis process?
What is the role of E6 and E7 in the viral oncogenesis process?
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How does the L1 protein contribute to the structure of the papillomavirus?
How does the L1 protein contribute to the structure of the papillomavirus?
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What is the primary function of the capsid protein L2 in papillomavirus?
What is the primary function of the capsid protein L2 in papillomavirus?
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What are the main factors contributing to cervical carcinogenesis associated with HPV?
What are the main factors contributing to cervical carcinogenesis associated with HPV?
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How has cervical cancer screening advanced since the introduction of the cervical screening test?
How has cervical cancer screening advanced since the introduction of the cervical screening test?
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What does Gardasil 9 protect against in terms of HPV types?
What does Gardasil 9 protect against in terms of HPV types?
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How do hepatitis B and C contribute to cancer development?
How do hepatitis B and C contribute to cancer development?
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What is the mechanism by which EBV induces Burkitt's lymphoma in B cells?
What is the mechanism by which EBV induces Burkitt's lymphoma in B cells?
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Explain the significance of chromosomal translocations in Burkitt's lymphomas.
Explain the significance of chromosomal translocations in Burkitt's lymphomas.
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What is the function of the HPV vaccine in cancer prevention?
What is the function of the HPV vaccine in cancer prevention?
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What is the significance of regular cervical cancer screenings for sexually active women?
What is the significance of regular cervical cancer screenings for sexually active women?
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Why is the HPV 6 and 11 considered significant in relation to genital warts?
Why is the HPV 6 and 11 considered significant in relation to genital warts?
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In the context of HPV, how does the cervical screening test enhance women's health?
In the context of HPV, how does the cervical screening test enhance women's health?
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How does hyperphosphorylation of RB contribute to cell cycle progression?
How does hyperphosphorylation of RB contribute to cell cycle progression?
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What results from mutations in the RB gene?
What results from mutations in the RB gene?
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Explain Knudson’s Two-Hit Hypothesis in the context of retinoblastoma.
Explain Knudson’s Two-Hit Hypothesis in the context of retinoblastoma.
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What is loss of heterozygosity (LOH) in relation to tumor suppressor genes?
What is loss of heterozygosity (LOH) in relation to tumor suppressor genes?
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What role does E2F play in the regulation of the cell cycle?
What role does E2F play in the regulation of the cell cycle?
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Differentiate between hereditary and sporadic retinoblastoma based on mutation requirements.
Differentiate between hereditary and sporadic retinoblastoma based on mutation requirements.
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What impact does mitotic recombination have on tumor suppressor genes?
What impact does mitotic recombination have on tumor suppressor genes?
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Describe the mechanism of gene conversion concerning tumor suppressor genes.
Describe the mechanism of gene conversion concerning tumor suppressor genes.
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How does chromosomal nondisjunction lead to loss of heterozygosity?
How does chromosomal nondisjunction lead to loss of heterozygosity?
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What is the significance of tracking loss of heterozygosity (LOH) in cancer diagnostics?
What is the significance of tracking loss of heterozygosity (LOH) in cancer diagnostics?
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What tools can be employed to analyze regions of LOH?
What tools can be employed to analyze regions of LOH?
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How is promoter methylation relevant to tumor suppressor gene functionality?
How is promoter methylation relevant to tumor suppressor gene functionality?
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What cytogenetic evidence supports the link between chromosome 13 and retinoblastoma?
What cytogenetic evidence supports the link between chromosome 13 and retinoblastoma?
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Explain the role of genetic testing in cancer risk assessment.
Explain the role of genetic testing in cancer risk assessment.
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What are the main processes that can alter gene transcription through changes in chromatin structure?
What are the main processes that can alter gene transcription through changes in chromatin structure?
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How does histone acetylation affect gene expression?
How does histone acetylation affect gene expression?
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What is Knudson’s two-hit hypothesis in relation to tumor suppressor genes?
What is Knudson’s two-hit hypothesis in relation to tumor suppressor genes?
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What distinguishes driver mutations from passenger mutations?
What distinguishes driver mutations from passenger mutations?
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What is the role of DNA methylation in cancer progression?
What is the role of DNA methylation in cancer progression?
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How does p16 function in regulating the cell cycle?
How does p16 function in regulating the cell cycle?
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Define the basic functional unit of chromatin.
Define the basic functional unit of chromatin.
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What is the significance of the Cancer Gene Census (CGC)?
What is the significance of the Cancer Gene Census (CGC)?
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What role does the p53 protein play in cellular processes?
What role does the p53 protein play in cellular processes?
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What happens to RB protein phosphorylation as a cell advances through the cell cycle?
What happens to RB protein phosphorylation as a cell advances through the cell cycle?
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What are 'writers', 'erasers', and 'readers' in the context of epigenetics?
What are 'writers', 'erasers', and 'readers' in the context of epigenetics?
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How can loss of p16 and p14Arf lead to uncontrolled cellular proliferation?
How can loss of p16 and p14Arf lead to uncontrolled cellular proliferation?
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How is the process of histone acetylation regulated in cells?
How is the process of histone acetylation regulated in cells?
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Explain how aging is linked to changes in DNA methylation.
Explain how aging is linked to changes in DNA methylation.
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What is the significance of loss of heterozygosity in cancer research?
What is the significance of loss of heterozygosity in cancer research?
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In what way is p16 used as a diagnostic tool in cancer?
In what way is p16 used as a diagnostic tool in cancer?
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What is the difference between benign and malignant tumors?
What is the difference between benign and malignant tumors?
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Why is it important to study the RB1 gene in multiple cancer types?
Why is it important to study the RB1 gene in multiple cancer types?
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How do environmental factors contribute to the development of cancer?
How do environmental factors contribute to the development of cancer?
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What is the effect of hypermethylation on gene expression?
What is the effect of hypermethylation on gene expression?
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What is the cellular function of cyclin-dependent kinases (CDKs)?
What is the cellular function of cyclin-dependent kinases (CDKs)?
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Describe the characteristics of leukemia.
Describe the characteristics of leukemia.
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How do mutations in the CDKN2A gene affect cell cycle regulation?
How do mutations in the CDKN2A gene affect cell cycle regulation?
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What does genome-epigenome interplay refer to in cancer?
What does genome-epigenome interplay refer to in cancer?
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What complexities arise from the role of tumor suppressor genes in cancer treatment?
What complexities arise from the role of tumor suppressor genes in cancer treatment?
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What is the role of chromatin structure in gene expression?
What is the role of chromatin structure in gene expression?
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What is the role of the retinoblastoma protein (RB) in the cell cycle?
What is the role of the retinoblastoma protein (RB) in the cell cycle?
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What impact does promoter methylation have on gene expression in cancer?
What impact does promoter methylation have on gene expression in cancer?
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How does mitotic recombination contribute to tumorigenesis?
How does mitotic recombination contribute to tumorigenesis?
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How do mutations in TP53 and CDKN2A contribute to cancer progression?
How do mutations in TP53 and CDKN2A contribute to cancer progression?
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Describe the effect of CDKN2A deletion on tumor suppressor protein levels.
Describe the effect of CDKN2A deletion on tumor suppressor protein levels.
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What is the potential role of stress or oncogenic factors in p16 functionality?
What is the potential role of stress or oncogenic factors in p16 functionality?
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In what cancers are CDKN2A deletions particularly implicated?
In what cancers are CDKN2A deletions particularly implicated?
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What are some common genetic alterations associated with cancer development?
What are some common genetic alterations associated with cancer development?
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Identify two hallmarks of cancer that promote tumor growth.
Identify two hallmarks of cancer that promote tumor growth.
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What is the diagnostic significance of P16 in cancer?
What is the diagnostic significance of P16 in cancer?
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How does P14 function relate to TP53 activity?
How does P14 function relate to TP53 activity?
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Why is the loss of tumor suppressor genes significant in cancer development?
Why is the loss of tumor suppressor genes significant in cancer development?
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How do mutations in proto-oncogenes lead to cancer?
How do mutations in proto-oncogenes lead to cancer?
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Explain the concept of epigenetics in relation to cancer.
Explain the concept of epigenetics in relation to cancer.
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What is the difference between innate and adaptive immunity in the context of cancer?
What is the difference between innate and adaptive immunity in the context of cancer?
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What are the primary mechanisms by which epigenetic changes occur?
What are the primary mechanisms by which epigenetic changes occur?
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What does Conrad Waddington's epigenetic landscape metaphor illustrate?
What does Conrad Waddington's epigenetic landscape metaphor illustrate?
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Explain how the tumor microenvironment can impact cancer progression.
Explain how the tumor microenvironment can impact cancer progression.
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What role does immune surveillance play in cancer development?
What role does immune surveillance play in cancer development?
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How can therapeutic strategies aim to restore TP53 function?
How can therapeutic strategies aim to restore TP53 function?
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Why is targeting specific signaling pathways in cancer treatment complex?
Why is targeting specific signaling pathways in cancer treatment complex?
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What is the significance of epigenetic modifications in cancer therapy?
What is the significance of epigenetic modifications in cancer therapy?
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How does the accumulation of genetic alterations contribute to cancer development?
How does the accumulation of genetic alterations contribute to cancer development?
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What role do transcription factors play in the epigenetic landscape of cells?
What role do transcription factors play in the epigenetic landscape of cells?
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Describe the importance of understanding tumor suppressor gene networks.
Describe the importance of understanding tumor suppressor gene networks.
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Describe the connection between genome instability and cancer.
Describe the connection between genome instability and cancer.
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What are hypomethylating agents, and how are they used in cancer treatment?
What are hypomethylating agents, and how are they used in cancer treatment?
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How do histone modifications affect gene expression?
How do histone modifications affect gene expression?
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How does the concept of senescence relate to cancer recurrence?
How does the concept of senescence relate to cancer recurrence?
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What impact do immune deficiencies have on tumor development, according to animal studies?
What impact do immune deficiencies have on tumor development, according to animal studies?
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Why is it essential to understand the mechanisms behind tumor angiogenesis?
Why is it essential to understand the mechanisms behind tumor angiogenesis?
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What is the role of p16 in familial melanoma?
What is the role of p16 in familial melanoma?
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How does loss of PTEN contribute to cancer progression?
How does loss of PTEN contribute to cancer progression?
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What are the mechanisms involved in Knudsen's Two-Hit Hypothesis?
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What is the significance of methylation in gene regulation?
What is the significance of methylation in gene regulation?
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How can we restore wild-type p53 function in cancer therapy?
How can we restore wild-type p53 function in cancer therapy?
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What is meant by 'loss of heterozygosity' (LOH)?
What is meant by 'loss of heterozygosity' (LOH)?
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How do NK cells identify stressed or malignant cells in the immune response?
How do NK cells identify stressed or malignant cells in the immune response?
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Why is the CDKN2A gene significant in mesothelioma?
Why is the CDKN2A gene significant in mesothelioma?
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How does the PI3K/AKT/MTOR pathway relate to cancer cell proliferation?
How does the PI3K/AKT/MTOR pathway relate to cancer cell proliferation?
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What role do MIC molecules play in the activity of NK cells against tumor cells?
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What role do sirtuins play in cancer therapy?
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Explain the importance of MHC Class I and Class II in T cell activation.
Explain the importance of MHC Class I and Class II in T cell activation.
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Describe the concept of gene conversion in the context of tumor suppressor genes.
Describe the concept of gene conversion in the context of tumor suppressor genes.
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Describe the three phases of tumor immunoediting.
Describe the three phases of tumor immunoediting.
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What modern techniques are used for tumor tissue analysis?
What modern techniques are used for tumor tissue analysis?
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What is T cell exhaustion, and how does it occur?
What is T cell exhaustion, and how does it occur?
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How does immunotherapy aim to reverse T cell exhaustion?
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What does the presence of MYC probes indicate in mesothelioma cases?
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How does chronic inflammation contribute to tumorigenesis?
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What is the principle behind Adoptive Cell Therapy (ACT)?
What is the principle behind Adoptive Cell Therapy (ACT)?
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What are the major challenges faced by CAR T cell therapy?
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Why is early identification of tumor suppressor gene mutations critical?
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What is the importance of RFLP in gene discovery?
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How does the process of preconditioning support T cell therapies?
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List one advantage and one disadvantage of using tumor vaccines.
List one advantage and one disadvantage of using tumor vaccines.
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How can genetic engineering improve T cell therapies?
How can genetic engineering improve T cell therapies?
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What is the role of dendritic cells in T cell activation?
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Describe how chronic antigen exposure affects T cell effectiveness.
Describe how chronic antigen exposure affects T cell effectiveness.
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How does CAR T cell therapy differ from traditional T cell therapies?
How does CAR T cell therapy differ from traditional T cell therapies?
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What role do NK cells play in tumor prevention?
What role do NK cells play in tumor prevention?
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How does age-related immunosenescence contribute to cancer risk?
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What role does immunosuppressive therapy play in cancer risk for transplant recipients?
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What are immune checkpoints and why are they significant in cancer treatment?
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What is the importance of T cell activation signals in the immune response?
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Explain the process of cancer immunoediting.
Explain the process of cancer immunoediting.
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What is the role of MHC molecules in the immune response?
What is the role of MHC molecules in the immune response?
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How can tumors evade immune detection?
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What advancements have been made in immunotherapy for cancer treatment?
What advancements have been made in immunotherapy for cancer treatment?
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How does thymic selection influence T cell maturation?
How does thymic selection influence T cell maturation?
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What is peripheral tolerance and its significance in cancer?
What is peripheral tolerance and its significance in cancer?
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What is the relationship between immunodeficiency disorders and cancer incidence?
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Why is understanding the tumor microenvironment critical for successful immunotherapy?
Why is understanding the tumor microenvironment critical for successful immunotherapy?
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Describe the significance of adaptive immunity in cancer response?
Describe the significance of adaptive immunity in cancer response?
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How do T cell differentiation and function relate to antigen recognition?
How do T cell differentiation and function relate to antigen recognition?
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What is the role of MHC-I in T cell activation?
What is the role of MHC-I in T cell activation?
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Describe the Two Signal Model of T cell activation.
Describe the Two Signal Model of T cell activation.
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How does immune tolerance help prevent autoimmunity?
How does immune tolerance help prevent autoimmunity?
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What strategies do tumors use to evade the immune system?
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Explain the concept of cancer immunoediting.
Explain the concept of cancer immunoediting.
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What is the function of immune checkpoint molecules like CTLA-4?
What is the function of immune checkpoint molecules like CTLA-4?
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Describe how chronic antigen exposure affects T cell function.
Describe how chronic antigen exposure affects T cell function.
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What are tumor-infiltrating lymphocytes (TIL) and their significance?
What are tumor-infiltrating lymphocytes (TIL) and their significance?
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How do cancer vaccines stimulate an immune response?
How do cancer vaccines stimulate an immune response?
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What is the role of TGF-β in tumor immunosuppression?
What is the role of TGF-β in tumor immunosuppression?
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What step is critical for the successful activation of T cells?
What step is critical for the successful activation of T cells?
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What is the significance of adoptive cell transfer (ACT) in cancer therapy?
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How do immune checkpoint inhibitors enhance anti-tumor responses?
How do immune checkpoint inhibitors enhance anti-tumor responses?
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What is the significance of immunoediting in tumor evolution?
What is the significance of immunoediting in tumor evolution?
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What is the Warburg effect and how does it relate to cancer cell metabolism?
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How do tumors create an immunosuppressive tumor microenvironment?
How do tumors create an immunosuppressive tumor microenvironment?
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What role do HIF1α and HIF2α play in glucose metabolism under hypoxic conditions?
What role do HIF1α and HIF2α play in glucose metabolism under hypoxic conditions?
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What is chromosomal instability (CIN) and how is it associated with cancer?
What is chromosomal instability (CIN) and how is it associated with cancer?
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Describe the relationship between inflammation and tumor progression.
Describe the relationship between inflammation and tumor progression.
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What is the general mechanism by which immune checkpoint inhibitors function?
What is the general mechanism by which immune checkpoint inhibitors function?
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How do tumor-derived factors affect the function of immune cells?
How do tumor-derived factors affect the function of immune cells?
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What are some challenges associated with immune checkpoint blockade therapies?
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What is the effect of mutations in DNA repair genes like BRCA1 on cancer risk?
What is the effect of mutations in DNA repair genes like BRCA1 on cancer risk?
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What role does tumor mutational burden play in targeted cancer therapies?
What role does tumor mutational burden play in targeted cancer therapies?
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Explain how the extracellular matrix (ECM) can influence tumor behavior.
Explain how the extracellular matrix (ECM) can influence tumor behavior.
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How does personalized medicine enhance cancer treatment approaches?
How does personalized medicine enhance cancer treatment approaches?
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Define immunoediting in relation to tumor development.
Define immunoediting in relation to tumor development.
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What mechanisms do tumors use to avoid immune recognition?
What mechanisms do tumors use to avoid immune recognition?
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Why is tumor mutational burden significant in targeted therapy?
Why is tumor mutational burden significant in targeted therapy?
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What is the significance of tumor-infiltrating lymphocytes in cancer prognosis?
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How do innate and adaptive immunity differ in their response times to tumors?
How do innate and adaptive immunity differ in their response times to tumors?
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What historical findings led to the development of immunotherapy?
What historical findings led to the development of immunotherapy?
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What are predictive biomarkers and why are they important in immunotherapy?
What are predictive biomarkers and why are they important in immunotherapy?
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What evidence supports the immune system's interaction with tumors?
What evidence supports the immune system's interaction with tumors?
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Explain the concept of immune tolerance in the context of tumors.
Explain the concept of immune tolerance in the context of tumors.
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What impact does combining immunotherapy with chemotherapy or radiotherapy have?
What impact does combining immunotherapy with chemotherapy or radiotherapy have?
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How do Major Histocompatibility Complexes (MHC) contribute to the adaptive immune response?
How do Major Histocompatibility Complexes (MHC) contribute to the adaptive immune response?
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Discuss the implications of immune surveillance in cancer prevention.
Discuss the implications of immune surveillance in cancer prevention.
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What are immune checkpoint inhibitors and their potential adverse events?
What are immune checkpoint inhibitors and their potential adverse events?
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What role did the DREAM trial play in advancing treatment for mesothelioma?
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What are the recently confirmed hallmarks of cancer according to the 2022 publication?
What are the recently confirmed hallmarks of cancer according to the 2022 publication?
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How do tumor-associated stroma cells influence tumor growth?
How do tumor-associated stroma cells influence tumor growth?
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What is the significance of TP53 in cancer biology?
What is the significance of TP53 in cancer biology?
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What mechanisms allow cancer cells to evade growth suppressors?
What mechanisms allow cancer cells to evade growth suppressors?
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Explain how cancer cells resist apoptosis.
Explain how cancer cells resist apoptosis.
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What is the primary benefit of CAR T-cell therapy in treating blood cancers?
What is the primary benefit of CAR T-cell therapy in treating blood cancers?
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What are enabling characteristics facilitating cancer hallmarks?
What are enabling characteristics facilitating cancer hallmarks?
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Describe sustained proliferative signaling and its impact on cancer.
Describe sustained proliferative signaling and its impact on cancer.
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What are the major challenges when using CAR T-cell therapy for solid tumors?
What are the major challenges when using CAR T-cell therapy for solid tumors?
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What is the effect of mutations in ras genes on proliferative signaling?
What is the effect of mutations in ras genes on proliferative signaling?
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How do immune checkpoints such as CTLA-4 and PD-1 affect T-cell activation?
How do immune checkpoints such as CTLA-4 and PD-1 affect T-cell activation?
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What innovative techniques are being explored to improve T-cell therapies?
What innovative techniques are being explored to improve T-cell therapies?
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What emerging hallmarks of cancer have been identified in the 2022 report?
What emerging hallmarks of cancer have been identified in the 2022 report?
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How does tumor-promoting inflammation contribute to cancer progression?
How does tumor-promoting inflammation contribute to cancer progression?
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What is the role of cytokine release syndrome (CRS) in CAR T-cell therapy?
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What are the primary pros of cancer vaccinations?
What are the primary pros of cancer vaccinations?
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What is the relationship between autophagy and cancer cell survival?
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What are two major cons associated with cancer vaccinations?
What are two major cons associated with cancer vaccinations?
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In what ways can targeting immune checkpoint inhibitors improve cancer treatment outcomes?
In what ways can targeting immune checkpoint inhibitors improve cancer treatment outcomes?
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What advancements in T-cell therapies are anticipated for the future?
What advancements in T-cell therapies are anticipated for the future?
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How does checkpoint blockade therapy benefit patients with tumors?
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What characteristics define CD8+ T cells that are targeted by anti-PD-1 therapy?
What characteristics define CD8+ T cells that are targeted by anti-PD-1 therapy?
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What are the potential autoimmune side effects associated with immune checkpoint blockade?
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Study Notes
Introduction to Neoplasia
- Neoplasms are abnormal masses of tissue that grow uncontrollably.
- Key characteristics include clonal cells arising from a single progenitor cell with mutations and reactive stroma surrounding them.
- Neoplasms are classified based on morphology, molecular genetics, site of origin, and behavior.
- Benign tumors are localized and don't metastasize, while malignant tumors invade locally and spread.
- Examples of benign and malignant tumors are colonic adenomas and adenocarcinomas.
Tumor Classification
- WHO Blue Books are the standard for tumor classification, updated periodically to incorporate new findings.
- Neoplasms are generally named with the suffix "-oma," where tissue type + "oma" indicates a benign tumor and cell/tissue type + "carcinoma" or "sarcoma" indicates a malignant tumor.
Clinical Presentation of Neoplasia
- Differentiation refers to the extent to which tumor cells resemble normal tissue.
- Anaplasia refers to the lack of differentiation in tumor cells, meaning they have reverted to a more primitive state.
- Anaplastic tumors are difficult to classify based solely on morphology, making immunophenotyping crucial.
- Metaplasia is the replacement of one cell type with another, often in response to chronic irritation or damage.
- Dysplasia is a pre-cancerous condition with abnormal cell growth.
Tumor Grading Systems
- Grading by differentiation evaluates the tumor's resemblance to normal tissue.
- The Nottingham Grading System for breast cancer assesses tubule formation, nuclear grade, and mitotic rate.
- The Gleason Scoring System for prostate cancer assesses the architecture of glandular structures.
Metastasis
- Metastasis is the spread of cancer cells from the primary site to distant locations.
- Mechanisms of spread include local invasion, lymphatic spread, hematogenous spread, and spread within body cavities.
- Common metastatic sites include lungs, liver, bone, brain, and lymph nodes.
Cancer Staging
- The AJCC Staging System uses the TNM classification (Tumor, Node, Metastasis) to assess the extent of the cancer.
- Staging guides treatment decisions and predicts prognosis.
- Staging criteria can evolve, as seen with thyroid cancer.
Cancer Prognosis and Therapy
- Prognostic factors include stage, grade, and molecular characteristics.
- Early detection through screening programs improves prognosis.
- Systemic therapy is used for advanced stages or high-risk cases.
Hallmarks of Cancer
- Cancer development involves multiple stages, starting with genomic instability and mutations.
- Hallmarks of cancer include sustained proliferative signaling, tumor-promoting inflammation, and altered cell energetics.
Aetiology of Carcinogenesis
- Cancer arises from mutations in normal cells, which can be lethal, passenger, or driver mutations.
- Driver mutations confer a selective advantage to tumor cells, enabling them to grow uncontrollably.
- Tumor suppressor genes normally inhibit cell growth, and mutations in these genes can lead to cancer.
Heterogeneity and Mechanisms of Tumor Evolution
- Tumors are genetically diverse, with subpopulations of cells with different mutations and characteristics.
- This heterogeneity can affect tumor behavior and response to treatment.
- Resistance to therapy can arise from the presence of resistant clones within the tumor.
Feedback Loop
- LESS tumor cell death, MORE proliferation, MORE rounds of DNA replication, MORE chance of mutations, MORE opportunities for instability.
Gene Classes Involved
- Oncogenes promote cancer development by driving cell proliferation.
- Tumor suppressor genes normally inhibit cell growth, and mutations in these genes can lead to cancer.
Hallmarks of Cancer
- Tumors can exhibit several hallmarks, including sustained proliferation, evading apoptosis, and angiogenesis.
- These hallmarks result from alterations in existing cellular pathways.
Oncogenes
- Oncogenes are genes that, when mutated or overexpressed, fuel cancer progression.
- They act as accelerators for cell proliferation.
MYC
- Transcription factor involved in numerous cancers.
- Coordinates various cellular processes.
- Overexpressed/activated in over 50% of cancers.
- Induces stemness and blocks senescence and differentiation.
- MYC addiction: tumors often rely heavily on MYC for survival.
Ras
- GTPase involved in signaling pathways.
- Mutations in Ras, especially K-Ras, lead to uncontrolled activation of these pathways, promoting cancer development.
Tumor Suppressor Genes
- Act as brakes on cell proliferation.
- Mutations or deletions in these genes can lead to the loss of cell growth control, contributing to cancer.
- Often require a "two-hit" effect (both alleles need to be inactivated) for complete loss of function.
- Commonly involved in controlling proliferation, initiating apoptosis in response to DNA damage, and regulating cell adhesion to prevent metastasis.
Tumor Evolution and Therapy
- Genomic instability creates a feedback loop where increased mutations lead to further instability and tumor progression.
- Tumors can develop resistance to treatments through genetic mutations, allowing them to evade therapy.
Tumorigenesis and Mutations
- Mutations can occur at large or small scales.
- Large-scale mutations are less common and can involve chromosome gain/loss, translocations, duplications, or deletions.
- Small-scale mutations are more frequent and include point mutations, which may prevent a specific protein function, or frame shifts, which can prevent protein production altogether.
Random Mutation and Carcinogenesis
- Tumors evolve through random mutations that give cells a selective advantage, allowing them to proliferate uncontrollably.
Clonal Expansion and Heterogeneity
- Clonal expansion occurs when mutations in subpopulations of cells provide them with a growth advantage.
- Tumor heterogeneity stems from genetic diversity within the tumor, posing challenges for treatment, as different clones may respond differently to therapies.
Oncogenes vs. Tumor Suppressor Genes
- Oncogenes: Drive cancer progression when mutated. Often overexpressed or mutated to become hyperactive, leading to uncontrolled cell growth.
- Tumor Suppressor Genes: Normally inhibit cell growth or induce apoptosis. Inactivation or loss of these genes removes growth controls, promoting cancer.
Carcinogenesis: Endogenous and Exogenous Causes
-
Endogenous Causes:
- Hereditary Mutations
- Direct Tissue Damage
- Synergistic Effects with Tobacco
- Hormonal Influence
Alcohol Consumption
- Acetaldehyde, a potent carcinogen produced by alcohol dehydrogenase, damages DNA and inhibits DNA repair.
- Ethanol can directly harm tissues like the mouth and throat.
- Alcohol acts as a solvent, enhancing the carcinogenic effects of tobacco smoke components.
- Chronic alcohol consumption can raise hormone levels (estrogen, insulin), linked to increased cancer risk.
Radiological Carcinogen: Ultraviolet (UV) Radiation
- UV radiation from the sun and artificial sources causes most non-melanoma skin cancers and melanomas.
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UV Radiation Types:
- UVA: Penetrates the dermis, causing genetic damage, photoaging, and immune suppression.
- UVB: Affects the epidermis, causing DNA damage and sunburn.
Biological Carcinogen: Human Papillomavirus (HPV)
- Over 100 types of HPV exist, with ~14 capable of causing cancer.
- HPV types 16 and 18 are responsible for approximately 70% of cervical cancers globally.
- Persistent infections can lead to pre-cancerous lesions and invasive cancers.
Gene Expression Regulation
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Transcription:
- Initiation: RNA polymerase binds to promoters, influenced by regulatory elements like enhancers and response elements.
- Cis-regulating elements: DNA sequences near the gene that influence expression.
- Trans-activating factors: Factors that bind to cis-acting sequences to control expression (transcription factors).
Transcription Factors
- Proteins that bind to specific DNA sequences to promote or inhibit transcription.
- Often require other molecules (e.g., hormones) to become active.
- Regulation can be spatial (tissue-specific expression), temporal (specific timing), or based on activity (protein modification, ligand binding, sequestration).
Post-Transcriptional Regulation
- RNA Processing: Involves capping, adding a poly-A tail, and splicing out introns, stabilizing mRNA.
- Alternative Splicing: One gene can produce multiple proteins by varying the included exons, increasing protein diversity.
Export and Stability
- Nuclear Export: mRNA transported from the nucleus to the cytoplasm through pores, at varying rates.
- mRNA Stability: Lifespan of mRNA affects gene expression, with some hormones/proteins influencing its longevity.
Non-coding RNA and Post-Transcriptional Regulation
- Most RNA is non-coding, with examples like ribosomal RNA (rRNA).
miRNA and Post-Transcriptional Regulation
- miRNA bind to protein complexes to form RNA-Induced Silencing Complexes (RISC), which inhibit mRNA translation.
- RISC binding interferes with translation, decreasing gene expression.
Translation
- mRNA Translation: mRNA is translated into proteins by ribosomes, using codons (3-nucleotide sets) that specify amino acids.
- tRNA: Transfer RNAs match mRNA codons and bring the corresponding amino acids to the ribosome for polypeptide chain formation.
Regulation at the Translational Level
- **Physical Regulation (Blockage):** Proteins (even miRNA) can bind to mRNA, preventing ribosome binding and translation.
- **Initiation Factors:** Help assemble the ribosome complex, and their availability can influence translation efficiency.
- **tRNA Heterogeneity and Codon Usage Bias:** Relative abundance of tRNA can vary between tissues, influencing translation rate.
Post-Translational Modifications
- These modifications increase the functional diversity of the proteome and can include:
- Covalent addition of functional groups or proteins
- Proteolytic cleavage of regulatory subunits
- Degradation of entire proteins (proteasomes degrade ubiquitinated proteins)
Functional Implications of Post-Translational Modifications
- Chaperones: Assist in the folding and stabilization of other proteins, influencing their function and stability.
- Activation: Some proteins require post-translational modifications to become active.
Examples of Post-Translational Modifications
- Phosphorylation: Addition of phosphate groups, often for protein activation.
- Glycosylation: Addition of carbohydrate groups, affecting folding, stability, and interactions.
- Methylation: Addition of methyl groups, influencing protein function and interactions.
- Acetylation: Addition of acetyl groups, usually at the protein's N-terminus.
Epigenetic Regulation
- Changes in gene expression without altering the DNA sequence itself, affecting how DNA is accessed and read.
Key Mechanisms of Epigenetic Regulation
-
DNA Methylation:
- Methyl groups added to cytosine residues in CpG islands, leading to gene silencing.
- Condenses DNA, reducing gene expression.
- Plays a role in silencing tissue-specific genes.
-
Histone Modification:
- Acetylation: Addition of acetyl groups to histones, leading to an open chromatin structure (euchromatin), accessible for transcription.
- Deacetylation: Removal of acetyl groups, resulting in a compact chromatin structure (heterochromatin), less accessible.
Histone Deacetylases (HDACs)
- Enzymes that remove acetyl groups, potentially leading to gene silencing, linked to cancer progression.
- HDAC inhibitors are valuable cancer therapeutics by increasing transcription and leading to cell cycle arrest and apoptosis.
Cancer
- Cancer typically originates from a single abnormal cell, caused by genetic mutations or epigenetic changes.
- These changes lead to dysregulated cell growth and/or death.
Mutation and Error Correction
- Cells constantly undergo mutations, but most are corrected by DNA repair mechanisms.
- Mutations in non-coding regions might not affect cell function, while those in coding regions can impact cell behavior.
Stages of Tumor Development
- Initiation: An initial mutation occurs, often corrected without consequence.
- Promotion: If the mutation provides a growth advantage, the cell proliferates.
- Progression: Further mutations lead to changes in cell behavior, allowing cells to invade tissues and metastasize.
Dysregulated Gene Expression in Cancer
- Cancer can be viewed as a disease of dysregulated gene expression that gives the cell a survival advantage.
- This involves:
- Increased expression of genes promoting cell growth and proliferation.
- Decreased expression of genes regulating cell death (apoptosis).
Types of Genes Involved in Cancer Development
- Proto-Oncogenes: Normally regulate cell growth and division. Mutations can activate them as oncogenes, causing uncontrolled cell growth.
- Tumor Suppressor Genes: Normally inhibit cell division, respond to DNA damage, and promote DNA repair. Mutations can inactivate them, removing growth controls.
Gene Expression Alterations in Cancer
- Oncogenes: Gain-of-function mutations increase activity and promote proliferation.
- Tumor Suppressor Genes: Loss-of-function mutations reduce their ability to suppress growth.
Epithelial-Mesenchymal Transition (EMT)
- The process where epithelial cells lose their cell polarity and cell-cell adhesion, gaining migratory and invasive properties.
- Facilitates invasion and metastasis in cancer.
Practical Applications of Studying Gene Expression in Cancer
-
Understanding gene expression pathways can inform cancer diagnosis, treatment, and prevention strategies.
-
Identifying specific gene expression signatures may help predict cancer risk or response to therapies.
-
Developing targeted therapies that modulate specific gene expression pathways may enhance treatment efficacy and reduce side effects.### Gene Expression Profiling
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Captures total gene activities, including increases and decreases, across a genome as patterns of gene expression.
-
Defines cancer subtypes based on their unique gene expression profiles.
-
Aids in personalized medicine by revealing deregulated pathways in specific cancers, leading to customized treatment options.
Breast Cancer
- A heterogeneous group of cancers with varied molecular features, prognoses, and responses to therapy.
- Classified into three subtypes based on gene expression profiling: Luminal, HER2-positive, and Basal-like.
- Subtyping helps in selecting targeted therapies, such as hormonal therapy for Luminal types and HER2 inhibitors for HER2-positive types.
Bone Marrow Cancer (Myelofibrosis)
- A bone marrow cancer causing extensive scarring and affecting blood cell production.
- Gene expression profiling of platelets, readily accessible compared to bone marrow, classifies disease subtypes and predicts progression.
- This information guides treatment choices and monitors disease status.
Tumor Heterogeneity
- A major challenge in cancer treatment, hindering the development of cures.
- Inter-tumor heterogeneity: Differences between tumors in different patients.
- Intra-tumor heterogeneity: Variation within a tumor, affecting both morphology and molecular level, resulting in tumor subpopulations.
Gene Regulation in Cancer
- Loss or alteration of gene expression regulation can drive cancer through impacts on cell survival, proliferation, invasion, and metastasis.
Transcriptional Regulation and Cancer
- Mutations or aberrant expression of genes regulating cell growth can trigger cancer.
- Overexpression of oncogenes or loss of tumor suppressor genes can lead to uncontrolled cell division.
Post-Transcriptional Dysregulation
- Abnormal splicing can create protein variants contributing to cancer progression.
- Dysregulation of mRNA stability factors can affect levels of cancer-related proteins, promoting tumor growth and treatment resistance.
Key Non-Coding RNAs and Their Functions
- MicroRNAs (miRNAs): Small non-coding RNAs that regulate gene expression post-transcriptionally by binding to target mRNAs.
- Ribosomal RNA (rRNA): Essential for ribosome structure and function, involved in translating mRNA into proteins.
- Long Non-Coding RNAs (lncRNAs): Play roles in gene regulation through chromatin remodeling, transcriptional regulation, and splicing.
- Circular RNAs (circRNAs): Function as decoys for RNA-binding proteins or miRNAs, indirectly affecting gene expression.
Epidemiology: The Study of Disease Distribution and Determinants
- An observational science used to understand health-related states and events, including diseases like cancer.
- Two main branches:
- Descriptive epidemiology: Focuses on disease distribution in a population, examining patterns in time, place, and person.
- Analytical epidemiology: Seeks to understand disease determinants, exploring relationships between exposures and disease outcomes.
Key Epidemiological Terms
- Incidence: The rate or risk of developing a condition.
- Cumulative incidence: Measures risk, showing how many people will develop the disease within a specific timeframe.
- Incidence Rate: Considers how long individuals are at risk, focusing on the speed at which new cases occur.
- Prevalence: The proportion of the population with a condition at a specific time.
- Point prevalence: Existing cases at a single point in time.
- Period prevalence: Existing cases over a set period.
- Population at Risk: Refers to the study population including only those susceptible to the health event being studied.
Understanding Cancer Trends and Statistics
- Different cancer types exhibit distinct epidemiological profiles, with rates varying by age and sex.
- Age-standardized rates are used to compare cancer rates over time, adjusting for changes in the age structure of the population.
Screening Programs
- Aim to detect asymptomatic cancers early, improving treatment outcomes and survival rates.
- Limitations include detecting indolent cancers and being less effective for conditions with no cure.
Analytical Epidemiology: Searching for Causes
- Used to understand the relationship between risk factors and disease outcomes, with the goal of establishing causation.
- Key features include comparison groups, such as those with versus without cancer (case-control) or exposed versus unexposed (cohort studies).
Research Methodologies
- Ecological Studies: Use aggregate data to explore associations with disease rates, but are limited by the ecological fallacy.
- Case-Control Studies: Compare people with the disease (cases) to those without (controls) to identify potential exposures.
- Cohort Studies: Follow a group of people over time to assess the relationship between exposure and disease development.
- Randomized Controlled Trials (RCTs): The gold standard for determining causation, where participants are randomly assigned to intervention or control groups.
Cancer Epidemiology
- Epidemiology is the study of the distribution and determinants of health-related states or events in specified populations, and the application of this study to the control of health problems.
- Epidemiological studies are observational studies that aim to investigate the association between a potential risk factor and a disease in a population.
-
Types of epidemiological studies:
- Case-control studies compare individuals with a disease (cases) to those without the disease (controls) to examine past exposures to a potential risk factor.
- Cohort studies follow a group of people over time to observe how many develop the disease and compare the incidence between those exposed to a potential risk factor and those who are not.
-
Strengths of case-control studies:
- Efficient for studying rare diseases or diseases with long latency periods.
- Allows researchers to identify potential associations without waiting for new cases to develop over time.
-
Limitations of case-control studies:
- Retrospective nature can introduce biases like recall bias.
- Difficulties in accurately measuring past exposures.
-
Strengths of cohort studies:
- Provides a clear temporal sequence (exposure before disease), which is crucial for establishing causation.
- Good for studying rare exposures.
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Limitations of cohort studies:
- Time-consuming and expensive, especially for diseases with long latency periods.
- Requires large sample sizes to observe sufficient cases of the disease.
-
Bias in epidemiological studies:
- Selection bias: If the cases and controls are not representative of the general population.
- Recruitment bias: If the participants are not selected randomly from the population.
- Response bias: If participants respond differently to questionnaires depending on their exposure status or disease status.
- Recall bias: If cases remember exposures differently than controls.
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Confounding in epidemiological studies:
- A confounder is a variable that is related to both the exposure and the outcome.
- Can distort associations between exposure and disease.
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Causation criteria:
- Strength of Association: Stronger associations are less likely to be due to confounding.
- Consistency: Findings should be replicable across different studies and populations.
- Temporality: The exposure must precede the disease.
- Biological gradient: There should be a reasonable biological mechanism explaining the relationship.
- Dose-Response: An increased level of exposure should be associated with an increased risk of disease.
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IARC (International Agency for Research in Cancer):
- Classifies carcinogens based on the strength of evidence of carcinogenicity to humans.
- Group 1: Carcinogenic to humans (e.g., smoking, asbestos)
- Group 2A: Probably carcinogenic (e.g., diesel engine exhaust)
- Group 2B: Possibly carcinogenic (e.g., certain night shift work)
- Group 3: Not classifiable (e.g., some chemicals with limited data)
- Group 4: Probably not carcinogenic (e.g., caprolactam)
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Benefits of epidemiological studies:
- Provides us with information on the distribution of cancer and risk factors.
- Helps in understanding the prognosis of diseases.
- Assists policymakers in planning services, screening programs, and preventive strategies.
Signal Transduction and Cancer Development
- Signal transduction is the process by which a cell responds to external signals through a series of molecular events that often involve changes in protein activity and gene expression.
-
Key components of signal transduction pathways:
- Ligands: Extracellular signals that bind to receptors (e.g., growth factors, cytokines, hormones, neurotransmitters)
- Receptors: Proteins on the cell surface or inside the cell that bind specific ligands activating cellular responses
- Second Messengers: Amplify the signal from the receptor (e.g., cAMP, calcium ions, diacylglycerol, and inositol triphosphate)
- Targets: Kinases and phosphatases modify protein activity through phosphorylation and dephosphorylation.
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Hallmarks of cancer:
- Sustained Proliferation: Cancer cells continue to divide uncontrollably.
- Evading Growth Suppression: Avoiding mechanisms that normally halt cell growth.
- Invasion and Metastasis: Ability to invade surrounding tissues and spread to other parts of the body.
- Replicative Immortality: Cancer cells avoid cellular aging and death.
- Inducing Angiogenesis: Formation of new blood vessels to supply the growing tumor.
- Resisting Cell Death: Evading programmed cell death (apoptosis).
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Key pathways involved in cancer development:
- Growth Factor Receptor Pathways: (EGFR, PDGFR)
- Cytokine Receptor Pathways: (JAK-STAT)
- G-Protein Coupled Receptors (GPCRs): Involved in numerous physiological processes, can affect cell growth and survival through various second messengers and intracellular signaling pathways.
Key Pathways in Cancer Proliferation
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Ras-Raf-MEK-ERK Pathway:
- Key pathway for cell proliferation that is frequently dysregulated in cancer.
- Involves sequential activation of Ras, Raf, MEK, and ERK leading to the activation of transcription factors that drive cell proliferation.
- Mutations in Ras, Raf, or MEK can lead to uncontrolled cell proliferation and cancer development.
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EGF-Receptor (HER2) Family:
- Receptor tyrosine kinases often overexpressed or mutated in cancers such as breast, gastric, and lung cancer.
- Can activate both the ras-raf-Erk and the PI3K/Akt pathways.
- Targeted by antibodies (e.g., Trastuzumab) or tyrosine kinase inhibitors (e.g., Erlotinib) for cancer treatment.
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JAK-STAT Pathway:
- Important for cytokine signaling and involves the activation of JAK (Janus Kinase) proteins, which then phosphorylate STAT (Signal Transducer and Activator of Transcription) proteins.
- Phosphorylated STATs move to the nucleus to drive gene expression associated with cell proliferation and survival.
- Abnormal activation of this pathway can be found in certain leukemias and lymphomas.
Specific Case Studies and Therapeutic Strategies
- Melanoma: BRAF mutations, especially V600E, are commonly found in melanoma. Vemurafenib, a BRAF V600E inhibitor, is effective in treating melanoma initially, but resistance often develops.
-
Targeting the Ras-Raf-Erk Pathway in Cancers:
- Drug targets: MEK1/2 inhibitors (e.g., Trametinib) have shown success in treating cancers with mutations in the pathway.
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Targeting the PI3K/Akt Pathway in Cancers:
- Akt is crucial for cell survival and metabolism.
- Inhibitors of PI3K or downstream targets are being developed as cancer therapies.
- Akt also controls protein synthesis, making it a target for cancer therapies as they need to produce more proteins to support their increased growth rate.
-
Therapeutic Strategies:
- Inhibitors of Receptor Tyrosine Kinases (RTKs): Block the activity of RTKs like EGFR, preventing activation and downstream signaling (e.g., Gefitinib, Erlotinib).
- Small Molecule Inhibitors: Target specific kinases within cancer pathways (e.g., MEK inhibitors).
- Monoclonal Antibodies: Bind to specific receptors or their ligands to prevent activation (e.g., Cetuximab targets EGFR).### Ras-Raf-MEK-ERK Pathway (MAPK Pathway)
- Regulates cell proliferation
- Dysregulation can lead to unchecked cell growth and cancer
- Components:
- EGFR (Epidermal Growth Factor Receptor)
- Ras
- Raf
- MEK
- ERK
- Inhibitors
- BRAF Inhibitors
- MEK Inhibitors
PI3K-AKT Pathway
- Regulates cell survival and metabolism
- Dysregulation often contributes to cancer cell survival and resistance to apoptosis
- Components:
- PI3K (Phosphoinositide 3-Kinase)
- AKT
- mTOR
- Inhibitors:
- AKT Inhibitors
- PI3K Inhibitors
BCR-ABL Fusion Protein in Chronic Myeloid Leukemia (CML)
- The BCR-ABL fusion is a result of the Philadelphia chromosome
- The fusion protein has an active kinase domain
- The fusion protein activates both the MAPK and PI3K pathways, leading to increased proliferation and survival of leukemia cells
- Therapeutic Target: Gleevec (Imatinib)
- Imatinib effectively treats CML by preventing the kinase activity of the fusion protein
- Mechanism: Gleevec binds to the ATP-binding site of the ABL kinase, blocking its activity
Summary of Therapeutic Approaches
- Targeting Proliferation: Focus on inhibitors that block critical components of the Ras-Raf-MEK-ERK pathway.
- Targeting Survival: Focus on inhibitors that target the PI3K-AKT pathway
- Targeting Specific Fusion Proteins: Inhibitors like Gleevec that target specific oncogenic fusions.
Resistance and Combination Therapies
- Resistance: Mutations or amplifications can occur within the targeted pathways
- Combination Therapies: Combining drugs targeting different pathways or different components within the same pathway can help overcome resistance and improve treatment efficacy
Clinical Applications and Research
- Clinical Use: Several inhibitors are already in clinical use for treating various cancers based on specific mutations and dysregulations in these pathways.
- Ongoing Research: New inhibitors and combination therapies are continually being developed and tested to address resistance mechanisms and improve treatment outcomes.
Conclusions
- Signal transduction transmits messages from the cell surface to the cytoplasm &/ or nucleus of cells
- Cell signaling regulates many biological processes such as proliferation, apoptosis, angiogenesis, migration
- Hyperactivation of signalling pathways is a common cause of carcinogenesis
- Targeting specific signalling components is an effective strategy for the treatment of many cancers
Telomere Overview
- Telomeres are regions of repetitive DNA found at the ends of chromosomes.
- They protect against chromosome degradation and fusion.
- Telomeres shorten with each cell division.
- Telomerase, an enzyme with reverse transcriptase activity, helps to maintain telomere length.
- Cancer cells often have high telomerase activity, allowing them to divide continuously.
- Shortened telomeres can contribute to a cell entering senescence, inhibiting further cell division.
- Several genetic disorders like Dyskeratosis congenita, Werner syndrome, and Bloom syndrome involve defective telomerase function.
- Telomerase knockout mice exhibit premature aging and increased cancer susceptibility.
DNA Replication
- DNA replication occurs in the S phase of the cell cycle.
- Requires unwinding of the double helix using helicase activity.
- DNA is synthesized in the 5' to 3' direction.
- Leads to a lagging and leading strand due to the antiparallel nature of the DNA double helix.
- Multiple origins of replication are needed to complete replication in a timely manner.
Cell Cycle
- Cells progress in a cyclical manner with distinct phases: G1, S, G2, and M.
- G1: Cell growth and preparation for DNA synthesis.
- S: DNA replication.
- G2: Preparation for mitosis.
- M: Cell division.
- G0: A resting state where cells are not actively dividing.
- Checkpoints ensure accurate replication and division at specific points in the cycle.
Cell Cycle Regulation
- Cell cycle progression is regulated by cyclin-dependent kinases (CDKs) and cyclins.
- CDKs are enzymes phosphorylating target proteins, requiring cyclins for activation.
- Formation of specific CDK/cyclin complexes at different cell cycle stages, allowing sequential progression.
- The activity of CDK/cyclin complexes is regulated by CDK inhibitors (CDKIs).
- Two types of CDKIs: INK4 family (inhibits CDK4/6) and CIP/KIP family (inhibits broader range of CDKs).
Retinoblastoma Protein (Rb) and Cell Cycle Control
- RB is a tumor suppressor protein controlling G1-S transition.
- RB binds to E2F transcription factors, preventing gene activation necessary for DNA synthesis.
- Phosphorylation of RB by CDK4/6 and CDK2 releases E2F, initiating S phase.
Telomeres are not Free and Open
- Telomeres form protective structures, like the T-loop and D-loop.
- Telomere-associated protein complexes (shelterin) control telomere elongation and protect against unwanted responses from single-stranded DNA (ssDNA).
Telomerase Inhibitors
- BIBR1532 inhibits RNA template translocation during telomere extension.
- Nucleoside analogues like AZT block DNA extension, preventing telomere elongation.
- Anti-hTERT cancer vaccines utilize hTERT peptides to elicit T-cell mediated cancer cell apoptosis.
- Competitive RNA binding antisense oligonucleotides prevent telomere extension by binding to the RNA template.
- G-quadruplex-stabilizing ligands block DNA elongation, inhibiting telomere extension.
Inhibiting Telomerase Activity for Cancer Therapy
-
Telomerase inhibitors are being explored as cancer therapeutics.
-
They show promising results in combination with other anti-cancer drugs.### Types of Cell Death
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Apoptosis:
- A programmed cell death process, meaning it's regulated and controlled, involving the activation of specific proteases and nucleases that break down cellular components
- Morphology: Cells shrink, the nucleus condenses, and the cell fragments into apoptotic bodies
- Biological features: ATP dependent, DNA fragmentation occurs in a ladder pattern, alteration in membrane asymmetry
- Physiological significance: Essential for development and maintaining tissue homeostasis (e.g. eliminating autoreactive immune cells)
- Other: It's energy-dependent, strictly regulated, and triggers phagocytosis without causing inflammation
-
Autophagy:
- Meaning "self-eating"
- Involves degradation of cellular components through lysosomal digestion
- Activated under nutrient deprivation and stress conditions
- Helps protect cells by removing damaged organelles and proteins
- Can be involved in cancer progression and neurodegenerative diseases
-
Necrosis:
- An uncontrolled cell death process often resulting from acute damage or injury
- Morphology: Cells swell then burst, release contents into surrounding tissue
- Biological features: loss of regulation of ion homeostasis, no energy requirement, a smear pattern of DNA, postlytic DNA fragmentation
- Physiological significance: Evoked by non-physiological disturbance, affects groups of cells, triggers phagocytosis by macrophages, causes inflammation
Distinguishing Apoptosis from Necrosis
- Apoptosis is controlled, orderly, cell maintains membrane integrity until a late stage, and non-inflammatory
- Necrosis is uncontrolled, chaotic, loss of membrane integrity leads to leakage, and leads to inflammation
Apoptosis Mechanism
- DNA Fragmentation: During Apoptosis, chromatin condenses and nucleases cleave DNA at specific sites, which results in a characteristic ladder-like pattern of DNA fragmentation
- Membrane Asymmetry: During Apoptosis, phosphatidylserine on the inside of the cell membrane flips to the outer layer which acts as a signal for macrophages to engulf the apoptotic cells
Extrinsic and Intrinsic Pathways of Apoptosis
- Extrinsic Pathway: Initiated by external signals through death receptors like TNF receptor and FAS receptor which activates caspase-8 (initiator caspase), caspase-8 then activates caspase-3, -7 (effector caspases)
- Intrinsic Pathway: Initiated by intracellular signals like DNA damage and growth factor withdrawal. It involves the release of cytochrome c which activates caspase-9, caspase-9 then activates caspase-3, -7
Cancer and Cell Death
- Evasion of Apoptosis: Cancer cells often have mutations in genes that regulate apoptosis, which allows them to survive despite damage
- Mechanisms of Evasion: Cancer cells overexpress anti-apoptotic proteins or underexpress pro-apoptotic factors
- Therapeutic Implications: Drugs that restore the normal apoptotic process in cancer cells or bypass the mechanisms of resistance are being developed
Other Key Facts
- Caspases: Mediate events associated with apoptosis
- Cyclin D-CDK4/6: Activates the cell cycle by phosphorylating Rb, releasing E2F, and promoting S phase entry
- Cyclin E-CDK2: Further drives the cell cycle by continuing Rb phosphorylation and activating DNA replication machinery
- Growth factor receptors: EGFR, HER2, activate intracellular signaling pathways that drive cyclin D expression and cell cycle progression
Cancer Implications
- Oncogenes: When mutated or overexpressed, these drive uncontrolled cell proliferation (e.g., Myc, Ras, EGFR, HER2)
- Tumor suppressor genes: Normally inhibit cell proliferation, mutations lead to loss of function, contributing to unchecked cell cycle progression (e.g., p53, Rb, CDKN2A, CDKN2B)
Therapeutic Strategies
- Traditional chemotherapy: Targets rapidly dividing cells, impacting both cancerous and normal healthy cells
- Targeted therapies: Focus on specific defects in cancer cells, examples include CDK inhibitors
- Challenges and considerations: Side effects, precision medicine
Educational Focus
- Cancer research: Emphasize the importance of understanding cell cycle control in the context of cancer and how this knowledge drives therapeutic innovation
- Clinical application: Understanding the mechanisms behind current and emerging therapies helps in their application and optimization in clinical settings
Conclusion
-
The control of the cell cycle is fundamental to maintaining normal cell function
-
Disruptions in this balance are a key feature of cancer
-
Advances in understanding cell cycle regulation and its alteration in cancer have led to the development of targeted therapies aimed at specifically addressing these defects
-
Continuous research and clinical trials are essential for improving these therapies and minimizing side effects, moving towards more effective and personalized cancer treatments### Neoplasia
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Definition: Uncontrolled cell growth that continues even after the initial stimulus is gone.
-
Benign Neoplasms: Non-cancerous, well-defined, slow growth, do not invade or spread to other tissues.
- Characteristics: Well-circumscribed, encapsulated, uniform cells, well-differentiated.
- Clinical Significance: Generally non-life-threatening but can cause issues based on location.
-
Malignant Neoplasms: Cancerous, invade surrounding tissues, can spread to distant sites.
- Characteristics: Infiltrative, poorly circumscribed, pleomorphic cells, anaplastic, high mitotic activity.
- Clinical Significance: Potentially aggressive with high mortality due to invasion and metastasis.
Invasion and Metastasis
- Invasion: Tumor cells cross organ boundaries and invade neighboring tissues.
- Metastasis: Tumor cells establish secondary tumors at distant sites from the primary tumor.
-
Steps in Tumor Invasion:
- Altered Cell-Cell Interactions: Tumor cells downregulate adhesion molecules (e.g., E-cadherin), leading to loss of contact inhibition and allowing cells to dissociate.
- Matrix Dissolution: Tumor cells secrete enzymes (e.g., matrix metalloproteinases (MMPs)) that degrade the extracellular matrix (ECM), facilitating movement through tissues.
- Altered Cell-ECM Interactions: Tumor cells change their interactions with the ECM, affecting their ability to attach and move.
- Movement Through ECM: Tumor cells migrate through the ECM towards blood vessels or lymphatics for dissemination.
Extracellular Matrix (ECM)
- Function: Separates tissue compartments; composed of basement membrane (BM) and interstitial matrix.
-
Components:
- Basement Membrane (BM): Dense matrix of collagens, glycoproteins (e.g., laminins), and proteoglycans.
- Interstitial Matrix: Loose matrix of fibrous structural proteins (e.g., collagens, elastins), adhesive glycoproteins, proteoglycans, and water.
Matrix Metalloproteinases (MMPs)
- Function: Degrade ECM components, facilitating tumor invasion.
-
Classes:
- Collagenases: Degrade collagens type I, II, and III.
- Gelatinases: Degrade collagen IV.
- Stromelysins: Degrade collagen IV and proteoglycans.
- Regulation: Activity is regulated by tissue inhibitors of MMPs (TIMPs).
Integrins
- Function: Transmembrane receptors that connect the cell to the ECM.
- Structure: Heterodimers consisting of α and β subunits.
-
Roles:
- Regulate cell shape, orientation, and movement.
- Trigger intracellular signaling cascades that alter gene expression.
Cell-Cell and Cell-Matrix Interactions in Cancer
- Normal Cells: Tight cell-cell adhesions (E-cadherin) and integrin interactions with ECM constituents, maintaining differentiation, regulating growth, and preventing cytoskeletal remodeling.
- Cancer Cells: Downregulation of adhesion molecules (e.g., E-cadherin), altered integrin expression, and increased ECM degradation, promoting invasion and metastasis.### Locomotion
- Invasion is the final stage before metastasis
- Involves a range of receptors and signaling proteins which affect the cytoskeleton
- MMPs, integrins, and catenins are important proteins in cellular migration
- Fibronectin, laminin, and collagen IV are key ECM constituents
- Tumors can invade as individual cells or in groups
- Mesencymal migration refers to single cells moving through the ECM
- Collective migration involves groups of cells and may be more effective
- Movement occurs by attaching to the ECM, detaching at the trailing edge, and contracting the cytoskeleton
- Promigratory factors can direct and motivate movement including cytokines, ECM cleavage products and GFs
- Collective migration allows for multi-cellular movement and protection of inner cells from immune attack
- Collective migration also increases autocrine factor concentrations
- Amoeboid migration is a faster alternative form of invasion
- Amoeboid movement involves shape changes rather than ECM degradation
- Cells may be able to switch between different forms of invasion
Metastasis
- Invasion opens up access to blood vessels, lymphatics, and body cavities
- Most cancers are able to metastasize
- Tumour dissemination can occur via direct seeding of body cavities, lymphatic spread, or hematogenous spread
- Direct seeding into a body cavity, such as the pleural or pericardial cavity, can allow for spread
- Lymphatic spread is typical of carcinomas and involves entry into the lymphatic vessels
- Lymphatic vessels drain into lymph nodes where tumour cells may arrest and form deposits
- Haematogenous spread occurs when tumour cells enter blood vessels and travel to distant organs
- Tumour cells often penetrate venous spaces and follow blood flow to deposit in the first capillary bed they encounter
- Metastasis is an inefficient process. Only a small fraction of circulating tumour cells successfully establish colonies.
- A variety of steps must be successfully completed to initiate metastasis including invasion, intravasation, survival, extravasation, and colonization.
- Tumour cells require specific genetic mutations to successfully metastasize
- Primary tumours are heterogeneous and contain subclones of cells, some of which are better prepared to metastasize
- Many of the genes involved in metastasis are acquired early in tumour evolution
Intravasation
- Intravasation into blood vessels involves penetration of the basal membrane and adhesion to the endothelium
- Requires ECM-integrin interactions and proteolytic enzymes
- Few cancer cells survive after entering the bloodstream
- Mechanical stressors and immune response are detrimental to tumour cells
- Aggregation with platelets and fibrin offers survival advantages
- Tumour-platelet thrombi shield cancer cells from the immune system
- Tumour-platelet thrombi also reduce mechanical stress and facilitate extravasation
- Expression of adhesion molecules like CD44 and surface mucins are involved in tumour-platelet aggregation
Extravasation
- Tumour cell arrest and extravasation at distant sites involve adhesion to endothelium and egress through the basal membrane
- Facilitated by tumour-platelet thrombi that express endothelium and ECM adhesion molecules
- Requires ECM-integrin interactions and proteolytic enzymes
Colonization
- Often the site of metastasis is the first capillary bed
- Some cancers prefer certain sites
- The “Seed and Soil” theory proposes that tumor cells have a preference for microenvironmentally suitable soils
- Examples include CD44-expressing tumours preferring LN deposition because LN venules express high levels of hyaluronate
- Breast cancer cells overexpressing CXCR4 hone to bone marrow where its ligand, SDF1, is highly expressed
- CD44 is a hyaluronate receptor
- CXCR4 is a chemokine receptor and SDF1 is its ligand
- Metastasis sites are determined by the tumour cells, the surrounding microenvironment, and circulatory patterns
Angiogenesis
- Tumours larger than 1-2mm require a new vascular network for survival
- Angiogenesis is the process of creating new blood vessels
- Angiogenesis is induced by the tumour via upregulation of angiogenic factors like VEGF and bFGF
- Angiogenesis is also induced by the downregulation of antiangiogenic inhibitors
- Hypoxia and the “angiogenic switch” are two key mechanisms that trigger angiogenesis
- Hypoxia results in HIF-1 and HIF-2 expression which trigger the transcription of pro-angiogenic factors
- The “angiogenic switch” results in altered expression of pro- and anti-angiogenic factors due to genetic aberrations
- Mutations in RAS and MYC can induce angiogenesis
- MMPs can release angiogenic factors such as bFGF
- Mutant p53 does not induce synthesis of anti-angiogenic molecules such as thrombospondin
Contact Inhibition
- Normal cells exhibit contact inhibition which prevents excessive cell growth and movement
- Cancer cells have lost this inhibition due to downregulation of adhesion molecules
- The lack of contact inhibition allows for uncontrolled growth and migration
Clinical Relevance
- Invasion depth is a prognostic indicator. Deeper invasion is associated with poorer prognosis.
- The presence of metastasis significantly reduces survival rates
- Anti-MMP treatment has had modest effects
- Angiogenesis inhibitors are in common use
- Bevacizumab (VEGF inhibitor) is a common treatment and is associated with improved outcomes in several cancers
Complexity of Cancer Pathways
- Cancer biology involves complex and redundant pathways
- Understanding these pathways is necessary for developing effective cancer therapies ### Hallmarks of Cancer
- Oncoviruses influence several hallmarks of cancer, including:
- Sustaining proliferative signaling
- Evading growth suppressors
- Resisting cell death
- Enabling replicative immortality
- Inducing angiogenesis
- Activating invasion and metastasis
Oncogenes and Proto-Oncogenes
- An oncogene is a mutated version of a proto-oncogene.
- Proto-oncogenes are present in normal cells and act as positive growth regulators.
- Cellular (proto-)oncogenes, such as c-Myc, c-Cbl, and c-Src, are found within the human genome.
- Viral oncogenes, such as v-Myc and v-Src, are transmitted by viruses.
- 803 human proto-oncogenes have been identified.
- Oncogenes can be activated by various mechanisms:
- Gene amplification
- Viral transduction/insertion
- Mutation of repressor/control region
- Chromosomal translocations
- Activation of endogenous retroviral (ERV) sequences
- Environmental mutagens (tobacco, chemicals etc.)
Tumor Suppressor Genes
- Tumor suppressor genes are negative growth regulators that control cellular proliferation, acting as 'controllers.'
- They regulate the cell cycle, apoptosis, and genomic stability.
- Key tumor suppressor genes include:
- p53 protein (TP53)
- Retinoblastoma protein (Rb; pRb)
p53 Pathway
- In a normal cell, p53 is inactivated by its negative regulator, mdm2.
- When DNA damage or other stresses occur, p53 is activated, leading to:
- Cell cycle arrest to allow repair and survival or
- Apoptosis to discard the damaged cell.
Proto-Oncogenes
- Proto-oncogenes are normal genes that can become oncogenes when activated improperly through mechanisms like viral integration.
- Proto-oncogenes act as positive growth regulators.
Oncogene Types
- Cellular Oncogenes (c-onc): Found in the host genome.
- Viral Oncogenes (v-onc): Incorporated into the host genome by viruses.
Historical Context
- The concept of oncoviruses evolved in the 20th century.
- Key milestones include:
- The discovery of the Rous sarcoma virus in chickens in 1908
- The identification of EBV in 1964
Recent Developments
- Merkel cell polyomavirus was discovered in 2008.
Implications
- About 18% of human cancers are caused by infections, with viruses being the second most significant risk factor after tobacco use.
- Approximately 8% of the human genome consists of endogenous retroviral sequences that may contribute to cancer reactivation.
Key Takeaways
- Oncoviruses can alter normal cellular processes, including growth control, adhesion, motility, and invasion.
- Understanding these processes is crucial for cancer research and therapeutic development.
Proto-oncogenes and Oncogenes
- Proto-oncogenes are normal genes involved in cellular growth and differentiation.
- Oncogenes arise from mutations in proto-oncogenes, leading to uncontrolled cell growth and cancer.
- Transformation can occur through mechanisms like gene amplification, viral insertion, or chromosomal translocations.
Tumor Suppressor Genes
- Tumor suppressor genes function to regulate and suppress cell growth, maintaining cellular homeostasis.
- P53 and RB are key tumor suppressor genes.
- P53 maintains genomic stability by halting the cell cycle in response to DNA damage and initiating repair or apoptosis if damage is irreparable.
- RB (Retinoblastoma protein) regulates the cell cycle by controlling the progression from G1 to S phase.
HPV and Viral Contributions to Cancer
- HPV is a non-enveloped DNA virus with over 150 serotypes; only certain types, such as HPV 16 and 18, are strongly associated with cancers.
- HPV's E6 and E7 proteins interfere with tumor suppressor proteins like P53 and RB, leading to uncontrolled cell proliferation and potential cancer development.
- HPV 6 and 11 are associated with warts (benign).
- HPV 16 and 18 are associated with cancer (cervical, vulvar, uterine, penile, anal, laryngeal, oesophageal).
- E6 and E7 genes code for proteins that inactivate human tumor suppressor proteins (p53 and Rb).
- L1 gene codes for a protein that self-assembles into the shell (capsid) of the virus.
- Empty (L1) capsids are called virus-like particles (VLPs), which are the basis of the HPV vaccines.
- HPV replicates and assembles exclusively in the nucleus.
- The HPV vaccine targets several HPV types to prevent cancer and contains virus-like particles (VLPs) without viral DNA, stimulating the immune system to protect against actual HPV infection.
Cervical Carcinogenesis
- Persistent infection with HPV can cause irreversible changes leading to invasive cancer.
- Viral integration into the host genome results in expression and production of E6 and E7 oncoproteins, binding and inactivating p53 and pRb respectively.
- Other co-factors are important in disease progression such as smoking, age at first intercourse, contraception use, genetics and family history.
- Cervical screening tests are used to detect HPV and prevent cervical cancer.
EBV (Epstein-Barr Virus)
- EBV is associated with Burkitt lymphoma and other malignancies.
- EBV induces chromosomal translocation in Burkitt's Lymphoma.
- EBV inhibits the apoptosis of premalignant tumor cells, allowing transforming events to occur.
- EBV is associated with Hodgkin’s lymphoma, nasopharyngeal carcinoma, B cell lymphoma and X-linked lymphoproliferative disease.
- EBV positivity is assessed by EBER—in situ hybridisation in formalin-fixed paraffin-embedded tissue sections.
Kaposi's Sarcoma and Merkel Cell Polyomavirus
- Kaposi's Sarcoma (HHV-8) is often seen in immunocompromised individuals, such as those with HIV/AIDS.
- Merkel Cell Polyomavirus is linked to Merkel cell carcinoma, a rare and aggressive skin cancer.
Key Takeaways
- Oncogenes and tumor suppressor genes work in tandem to regulate cell growth; mutations or viral interference can disrupt this balance.
- HPV, through its oncogenes (E6 and E7), disrupts tumor suppression and contributes significantly to cervical cancer and other malignancies.
- Vaccines targeting HPV have proven effective in reducing cancer incidence.
Tumor Suppressor Genes
- Tumor suppressor genes (e.g., P53, RB) normally regulate cell growth and suppress tumor formation.
- Loss or mutation in these genes leads to unregulated cell growth, contributing to cancer development.
Retinoblastoma (RB)
- Type: Rare childhood cancer.
- Inheritance: Can be hereditary (bilateral) or sporadic (unilateral).
- Mechanism: Involves hyperphosphorylation of RB protein, disrupting its function in regulating cell cycle progression.
- Normal Role: RB protein binds to transcription factor E2F, preventing uncontrolled cell proliferation.
- Hyperphosphorylation of RB releases E2F, allowing cell cycle progression.
- Mutations: Mutated RB can no longer bind E2F, leading to unchecked cell division.
- Knudson’s Two-Hit Hypothesis : Hereditary Retinoblastoma requires only one additional mutation to cause disease; Sporadic Retinoblastoma requires two independent mutations occurring in the same cell.
Loss of Heterozygosity (LOH)
- LOH occurs when there is a loss of the wild-type allele of a tumor suppressor gene.
- LOH can occur through mitotic recombination, gene conversion, and chromosomal nondisjunction.
- LOH is a significant mechanism for the inactivation of tumor suppressor genes and can be used to identify new tumor suppressor genes.
Tumor Suppressor Genes in Cancer Therapy and Diagnostics
- Genetic Testing: Identification of TSG mutations in patients helps diagnose and predict cancer risk.
- Therapeutic Strategies: Drugs that target specific pathways affected by TSG mutations or restore their normal function.
Tumor Suppressor Genes (TSGs)
- TSGs regulate cell proliferation and suppress tumor formation.
- Inactivation of both alleles of a TSG is required for a mutant phenotype (Knudson's two-hit hypothesis).
- Mechanisms of TSG inactivation include:
- Two independent mutations within the same cell
- Mitotic recombination
- Gene conversion
- Chromosomal nondisjunction and loss of heterozygosity (LOH)
- Promoter methylation
- LOH is crucial for identifying other TSGs.
RB1: "Cell Cycle Clock"
- RB1 is a key regulator of the cell cycle, acting as a "cell cycle clock".
- RB1 integrates signals from inside and outside the cell to regulate cell cycle entry.
- RB1 controls the phosphorylation of E2F (a transcription factor), which regulates the G1 to S phase transition.
- RB1 phosphorylation state is tightly coordinated with cell cycle progression:
- Unphosphorylated RB1 (active) binds E2F, preventing cell cycle entry.
- Phosphorylated RB1 (inactive) releases E2F, allowing cell cycle progression.
p53 Pathway
- p53 is a tumor suppressor protein that responds to DNA damage and regulates apoptosis, cell cycle arrest, senescence, cell growth inhibition, and metabolic stress adaptation.
- p53 is negatively regulated by MDM2.
- p14ARF inhibits MDM2, thus activating p53.
- Activated p53 arrests the cell cycle by interacting with p21, preventing CDK1/CyclinA-induced cell cycle progression.
- Inactivation of p16 or p14ARF can lead to uncontrolled cell proliferation.
CDKN2A and Its Roles
- CDKN2A encodes p16 and p14ARF.
- p16 inhibits cyclinD/CDK4/6 complex, blocking RB phosphorylation and preventing cell cycle progression.
- p14ARF inhibits MDM2, activating p53.
- Loss of CDKN2A function (both p16 and p14ARF) leads to unregulated cell cycle progression and promotes tumor development.
- P16 is a diagnostic marker for melanoma and mesothelioma.
- P16 deletion or mutation are frequently observed in various cancers.
- Overexpression of p16 (wild-type or mutant) can have negative implications for cell proliferation in some cancers.
Targeting TSGs for Cancer Therapy
- Restoring wild-type p53 function is a potential therapeutic strategy for cancer.
- Targeting MDM2 and p53 interaction using drugs like nutlin and RITA can reactivate p53.
- Nuclear export inhibitors like leptomycin B can increase p53 levels in the nucleus.
- PRIMA-1 can restore the wild-type conformation of mutant p53.
- Targeting PTEN, another tumor suppressor gene, can inhibit the PI3K/AKT/MTOR pathway, which is hyperactivated in cancers with PTEN mutations.
### Epigenetics and Cancer
- Epigenetics refers to heritable changes in gene expression without altering DNA sequence.
- Primary epigenetic mechanisms include DNA methylation and histone modifications.
- Epigenetic alterations in cancer include changes in DNA methylation patterns and histone modifications, leading to aberrant gene expression.
- Epigenetic alterations can be targeted therapeutically to restore normal gene function and inhibit tumor growth.
Histone Acetylation
- Histone acetylation is an epigenetic modification that affects chromatin structure and gene expression.
- Acetylation of histone tails neutralizes their positive charge, loosening their interaction with DNA and increasing gene accessibility.
- Acetylated lysine residues are associated with transcriptional activation, while deacetylated lysine residues are associated with transcription repression.
- Histone acetyltransferases (HATs) add acetyl groups, while histone deacetylases (HDACs) remove them.
- Histones near active genes are often hyperacetylated.
Epigenetic Regulators
- Epigenetic modifications are controlled by specific enzymes:
- Writers (add modifications): acetyltransferases
- Erasers (remove modifications): deacetylases
- Readers (recognize and bind modifications)
- Histones are subject to various post-translational modifications, including methylation, acetylation, phosphorylation, and ubiquitination.
- These modifications influence chromatin structure and gene expression.
Epigenetic Changes in Cancer:
- Normal epigenetic regulation can be disrupted in cancer, affecting gene expression and contributing to tumor development.
- Targeting epigenetic alterations is a promising strategy for cancer therapy.
- Therapeutic approaches aim to restore normal gene expression by reversing aberrant epigenetic changes.
DNA Methylation
- DNA methylation is a process that adds methyl groups to cytosine residues in DNA.
- It typically occurs at CpG dinucleotides and affects gene expression by altering chromatin structure or interfering with transcription factor binding.
- Methylation leads to condensed chromatin and repressed transcription.
- Demethylation leads to expanded chromatin and permitted transcription.
- Regions of chromosomes with fewer CpG sites are usually dense in regulatory elements like promoter regions.
- Genes with CpG-rich promoters are typically unmethylated because repetitive sequences like LINE, SINE, and LTRs are scattered throughout them.
- This unmethylation prevents genome instability caused by these repetitive structures.
Epigenetics and Aging
- Epigenetic changes, including DNA methylation patterns, are affected by aging.
- These changes can lead to the silencing of tumor suppressor genes or the activation of oncogenes, contributing to cancer progression.
- Methylation patterns can become dysregulated with age, resulting in hypermethylation (more methylation) in previously unmethylated regions and hypomethylation (less methylation) in previously methylated regions.
DNA Methylation and Histone Modification
- DNA methylation and histone modification are linked.
- Higher levels of methylation (hypermethylation) are often found in areas with denser chromatin, which is inactive.
- Hypomethylation is associated with less dense chromatin, which is active.
Cancer Overview
- Cancer is a diverse group of diseases characterized by unregulated cell proliferation driven by genetic and epigenetic alterations.
- It arises through a multi-step process that disrupts anti-cancer defense mechanisms.
- Benign tumors are non-invasive but hyper-proliferative.
- Primary tumors refer to the initial tumor cells.
- Malignant tumors are invasive and invade surrounding tissues.
- Metastatic tumors have spread to distant organs via blood or lymph.
Leukemia and Lymphoma
- These are hematological malignancies arising from blood cells.
- Leukemia originates from myeloid or lymphoid progenitor cells and is found in bone marrow and blood.
- Leukemia cells can infiltrate other organs.
- Lymphoma originates from lymphatic tissue, primarily in lymph nodes.
Origins of Cancer
- Cancer arises from a complex interplay of environmental exposures, biological factors, and genetic predisposition.
- Environmental factors include exposure to DNA-damaging chemicals such as cigarette smoke, formaldehyde, and asbestos.
- Genetic factors involve inherited predispositions to certain cancers, like breast, colon, endometrial, and ovarian cancers.
- Infectious diseases can also contribute to cancer development, such as lymphoma, carcinoma, and leukemia.
Genetic Drivers of Cancer
- Cancer is a disease of the genome, characterized by genetic and epigenetic alterations.
- Mutations accumulate over a lifetime, leading to cancer development.
- Inherited mutations account for a small percentage of all cancers (~5-10%).
- Cancer heterogeneity is significant, with varying mutations and genomic profiles observed in different stages of cancer.
- The Cancer Gene Census (CGC) identifies human genes implicated in cancer through mutations.
- The vast majority of cancer driver genes (~90%) contain somatic mutations.
- A significant proportion (~20%) have germline mutations that predispose individuals to cancer.
- Some genes (~10%) exhibit both somatic and germline mutations.
Epigenomic Dysfunction in Cancer Cells
- Cancer cells often exhibit epigenetic dysregulation, including alterations in DNA methylation patterns and chromatin structure.
- These changes significantly contribute to cancer development.
- Many cancers demonstrate global hypomethylation and focal hypermethylation of unmethylated CpG islands.
- Epigenetic regulatory genes are frequently mutated in various cancer subtypes.
Hallmarks of Cancer
-
Cancer progression is characterized by a series of hallmarks, including:
- Sustaining proliferative signaling
- Evading growth suppressors
- Resisting cell death
- Enabling replicative immortality
- Inducing angiogenesis
- Activating invasion and metastasis
- Cellular metabolism
- Immune evasion
-
Enabling characteristics further support these hallmarks, such as:
- Genome instability
- Inflammation
The Cell Intrinsic Barrier to Tumorigenesis
- Multi-cellular organisms have evolved complex mechanisms to prevent uncontrolled cell growth.
- Under normal circumstances, most adult cells are in a non-dividing state (G0).
- A limited pool of cells maintains tissue and organ homeostasis.
- Cells are maintained in a quiescent state by inhibitory signals and the absence of stimulatory signals.
- Growth factors can stimulate cells to enter the cell cycle.
Tumor Suppressor Genes and Cancer
- The multistep model of cancer development proposes that tumors arise from accumulated genetic and epigenetic changes.
- Oncogenes are activated through various mechanisms like amplification, point mutation, and translocation, providing excessive growth signals.
- Tumor suppressor genes are inactivated through processes like chromosomal loss, mutation, methylation, and viral protein binding, disrupting growth control.
Tumor Suppressors and Oncogenes
- Tumor suppressor genes function to suppress growth or promote apoptosis.
- Oncogenes often activate growth signaling pathways.
- Tumor cells accumulate mutations in these critical genes, leading to the development of cancer.
Features of Oncogenes
- Oncogenes are dominant, gain-of-function mutations of proto-oncogenes.
- Proto-oncogenes are positive regulators of the cell cycle that are normally regulated by extracellular or intracellular mechanisms.
- Mutations in proto-oncogenes remove these regulatory mechanisms, leading to overactive signaling and increased proliferation.
- Mutations in proto-oncogenes can result from:
- Mutations in the coding region, enhancing protein activity.
- Gene duplication, leading to increased protein production.
- Mutations in the regulatory region, enhancing transcription.
- Translocations, resulting in a fusion gene with altered functionality.
Tumor Suppressor Genes and Oncogene Interactions
- The presence of an oncogene alone may not lead to cancer if tumor suppressor genes are functional.
- Inactivation of a tumor suppressor gene without an oncogene may not immediately cause cancer due to the lack of a growth-promoting force.
Genes Downregulated in Cancer
- Hypermethylation can lead to the downregulation of genes crucial for cancer suppression.
Hypomethylating Agents
- Hypomethylating agents, such as 5-azacytidine and decitabine, inhibit DNA methyltransferase enzymes, reducing methylation levels.
Targeted Small Molecule Epigenetic Drugs
- Targeted small molecule epigenetic drugs have emerged as promising therapeutic agents in cancer treatment.
Immunotherapy and Cancer
- Immunotherapy has revolutionized cancer treatment, particularly with the advent of checkpoint blockade therapies.
- The concept of using the immune system to fight cancer dates back to the late 19th century, initially observed by William Coley.
- The theory of immune surveillance, proposed by Sir Macfarlane Burnet and others, suggested that the immune system constantly monitors and eliminates abnormal cells.
- Tumors arise when immune surveillance fails.
Immune System Basics
- The immune system comprises innate and adaptive branches.
- Innate immunity provides a rapid, non-specific response to pathogens, acting as the first line of defense.
- Innate immune cells include macrophages and natural killer (NK) cells.
- Adaptive immunity is slower and highly specific, involving T cells and B cells.
Tumor Microenvironment
- Tumors are surrounded by a microenvironment that includes various immune cells, such as macrophages, T cells, and NK cells.
- The presence of these cells does not necessarily indicate a successful immune response against the tumor.
Evidence from Animal Studies
- Animal models have been instrumental in understanding how the immune system interacts with tumors.
- Studies on immunodeficient mice demonstrate that the absence of essential immune components (T cells, B cells, NK cells) increases tumor development.
- Depletion of NK cells in mice leads to higher tumor incidence, highlighting the role of different immune cells in tumor prevention.
Human Evidence and Observations
- Immunosuppression is linked to increased cancer risk in humans.
- Older individuals often have a weaker immune response, increasing their susceptibility to cancer.
- Transplant recipients, who take immunosuppressive drugs to prevent organ rejection, have a higher risk of developing cancer.
- Immunodeficiency disorders are associated with increased cancer rates, despite shorter lifespans and more severe illnesses.
Recent Advances and Immunotherapy
- Checkpoint blockade therapies target immune checkpoints (like PD-1 and CTLA-4) to enhance the immune system’s ability to recognize and destroy cancer cells.
- Clinical success of these therapies has proven that stimulating the immune response can be an effective cancer treatment.
NK Cells in Innate Immunity
- NK cells recognize tumor cells through molecules like MICA that bind to NK cell receptors.
- They produce interferon-gamma to recruit other immune cells and release perforin and granzymes to induce apoptosis in tumor cells.
CD8+ Cytotoxic T Cells in Adaptive Immunity
- CD8+ T cells recognize tumor antigens presented by MHC Class I molecules.
- They kill tumor cells by releasing perforin and granzymes.
Antigen Presentation
- MHC Class I presents endogenous antigens (from inside the cell) to CD8+ T cells.
- MHC Class II presents exogenous antigens (taken up from outside the cell) to CD4+ T cells.
- Dendritic cells can present antigens on MHC Class I, even if they were taken up from outside the cell, through a process called cross-presentation.
T Cell Activation
- T cell activation requires two signals:
- Recognition of antigen-MHC complex (signal 1).
- Co-stimulation (signal 2), involving CD28 on T cells binding to CD80/86 on antigen-presenting cells (APCs).
- Without signal 2, T cells may become anergic or undergo apoptosis.
T Cell Differentiation
- Naive T cells differentiate into various subtypes:
- Effector cells
- Memory cells
- Terminally differentiated cells
- T cell differentiation and function depend on the strength and duration of antigen recognition.
Immune Tolerance and Self vs. Non-Self Discrimination
- Thymic selection eliminates or deactivates T cells that recognize self-antigens, preventing autoimmunity.
- Peripheral tolerance involves regulatory T cells (Tregs) that suppress self-reactive T cells that escape thymic selection.
Cancer Immunoediting
- Cancer immunoediting describes the interplay between the immune system and tumors in three phases:
- Elimination: The immune system successfully eliminates malignant cells.
- Equilibrium: The immune system controls tumor growth, but tumors are not eradicated.
- Escape: Tumors evolve mechanisms to evade immune detection and destruction, leading to clinical cancer.
Tumor Evasion Strategies
- Tumors can evade immune responses by:
- Altering or downregulating antigen presentation.
- Producing immunosuppressive cytokines.
- Recruiting regulatory T cells.
- Expressing checkpoint molecules, inhibiting T cell activation.
Chronic Antigen Exposure and T Cell Exhaustion
- Continuous antigen exposure can lead to T cell exhaustion, decreasing immune effectiveness.
- Immunotherapy research focuses on reversing T cell exhaustion to boost anti-tumor responses.
T Cell Therapies
- T cell therapies fall under the umbrella of adoptive cell therapy (ACT) and chimeric antigen receptor (CAR) T cell therapy.
Adoptive Cell Therapy (ACT)
- ACT involves transferring immune cells from the tumor microenvironment back into the patient.
- Steps involve harvesting T cells from the tumor, culturing and expanding them in the lab, and reintroducing them into the patient.
- Preconditioning with chemotherapy or irradiation may be necessary to deplete existing T cells and make space for the introduced T cells.
- Advantages include personalized therapy and the potential for tumor eradication.
- Disadvantages include limited applicability to patients who can tolerate preconditioning, high costs, labor-intensive procedures, and potential inefficiencies for tumors lacking T cells or with unknown antigen specificity.
CAR T Cell Therapy
- CAR T cell therapy involves genetically modifying T cells to express chimeric antigen receptors (CARs), enabling them to specifically target tumor antigens.
- T cells are harvested from the patient's blood, engineered to express CARs, expanded in the lab, and reintroduced into the patient.
- Effective for hematological cancers.
Tumor Vaccines
- Tumor vaccines aim to stimulate the immune system to recognize and target tumor-specific antigens.
Immune Checkpoint Blockade
- Checkpoint blockade therapies target immune checkpoints to enhance the immune system's ability to recognize and attack cancer cells.
- They have revolutionized cancer treatment, offering durable responses in select cancer types.
Tumor Immunology
- Cancer cells evade the immune system, forming malignant tumors with unique properties.
- Hallmarks of cancer include evading immune destruction, promoting inflammation, and sustaining proliferative signals.
- Immunotherapy became prominent around 2013 with FDA approvals of therapies like checkpoint blockade.
- Key questions in tumor immunology include how tumors interact with the immune system, how tumors are eliminated, and how tumors evade immune detection.
Innate and Adaptive Immunity
- Innate immunity is rapid and non-specific, while adaptive immunity is slow and specific.
- Immunosuppressed individuals, transplant recipients, and the elderly are at higher cancer risk.
- Presence of tumor-infiltrating lymphocytes, especially T cells, correlates with better prognosis.
Antigen Presentation and T Cell Activation
- Tumor cells present antigens via MHC-I (for CD8+ T cells) or MHC-II (for CD4+ T cells), allowing the immune system to recognize them.
- T cell activation requires two signals: T cell receptor recognition of antigen-MHC and co-stimulatory molecules.
- Without Signal 2, T cells may become tolerant (anergy).
- Successful T cell activation leads to cell differentiation, critical for maintaining a memory T cell response.
Immune Tolerance and Checkpoints
- Central and peripheral tolerance mechanisms ensure that self-reactive T cells are eliminated or rendered non-functional.
- T cell activation is negatively regulated by immune checkpoints, such as CTLA-4, to prevent autoimmunity.
Cancer Immunoediting and Evasion Strategies
- Tumors can evolve to avoid immune detection through low immunogenicity, immunosuppression, and immune checkpoint hijacking.
- Tumors may downregulate MHC-I expression and release factors like TGF-β to suppress immune responses.
- Immune checkpoint hijacking allows tumors to exploit checkpoints to inhibit T cell responses.
Recap and Summary
- The immune system has both innate and adaptive components crucial for tumor control.
- Immunosurveillance is the initial immune response that can eliminate some cancers.
- Immunoediting is the adaptation of tumors to immune pressure, which can lead to more aggressive, immune-evasive variants.
Overview of Immunotherapy in Cancer
- Immunotherapy targets the immune system rather than the cancer cells directly.
- Successful T cell responses against tumors are the goal of immunotherapy.
- Immunotherapy includes T cell therapies (TIL and CAR T cell therapy), tumor vaccines, and immune checkpoint blockade.
Evolution of Cancer Treatment Paradigms
- Traditional cancer therapy targets tumor growth, while immunotherapy aims to target the immune system for long-lasting defense against cancer cells.
Types of Cancer Immunotherapy
- Adoptive Cell Transfer (ACT) includes TIL and CAR T-cell therapy to enhance the number of tumor-specific T cells.
- Cancer Vaccines aim to stimulate immune responses against tumor antigens.
- Immune Checkpoint Inhibitors block molecules like CTLA-4 and PD-1/PD-L1 to restore T-cell function.
T-Cell Based Immunotherapies
- Adoptive cell therapy (ACT) involves transferring immune cells with anti-tumor activity into patients.
- TIL therapy involves extracting T cells from tumors, expanding them in the lab, and reinfusing them.
- CAR T-cell therapy uses genetically engineered T cells with chimeric antigen receptors targeting specific tumor antigens.
Advantages and Challenges of T-Cell Therapies
- TIL and CAR T therapy are highly effective in hematologic cancers.
- They bypass typical antigen-MHC interactions, directly activating T cells.
- They are less successful in solid tumors, expensive, and require specialized facilities.
- They can cause side effects, such as cytokine release syndrome.
Future Directions in T-Cell Therapy
- Advanced engineering techniques are being explored to improve T-cell therapies.
- CRISPR/CAS9 is used for personalized T cells.
- T cells are being utilized to carry therapeutic molecules.
- Techniques are being developed to prolong T-cell survival.
Immune Checkpoints and Blockade Therapies
- CTLA-4 and PD-1/PD-L1 are checkpoints that tumors can exploit to inhibit T-cell activity.
- Checkpoint blockade therapies inhibit CTLA-4 and PD-1/PD-L1 to restore T-cell functionality.
Challenges of Immune Checkpoint Inhibitors
- Immune checkpoint inhibitors can cause immune-related adverse events (IRAEs), including autoimmune-like symptoms.
- Only a subset of patients benefits from these therapies, and identifying predictive biomarkers is an active area of research.
Combination Therapy in Immunotherapy
- Combining immunotherapy with other treatments, such as chemotherapy, has shown promise.
Conclusion
- Immunotherapy holds potential for cancer treatment when combined with other treatments.
- Research is ongoing to refine immunotherapy techniques and develop predictive markers.
Hallmarks of Cancer
- Cancer cells acquire six hallmark capabilities:
- Sustained proliferative signaling
- Evading growth suppressors
- Resisting cell death
- Enabling replicative immortality
- Inducing angiogenesis
- Activating invasion and metastasis
- Deregulating cellular metabolism
- Avoiding immune destruction
Enabling Characteristics
- Two enabling characteristics facilitate the acquisition of hallmark capabilities:
- Genome instability and mutations
- Tumor-promoting inflammation
Sustained Proliferative Signaling
- Normal tissues control cell growth and division by regulating growth-promoting signals.
- Cancer cells deregulate these signals, often through:
- Increased growth factor sensitivity
- Constitutive activation of downstream signaling pathways
- Mutations in genes like Ras, disrupting negative feedback mechanisms
Evading Growth Suppressors
- Tumor suppressor genes (e.g., RB and TP53) regulate cell growth and division.
- Inactivation of these genes allows cancer cells to evade growth suppression.
Resisting Cell Death
- Apoptosis is a programmed cell death mechanism that cancer cells often avoid.
- Mechanisms include:
- Mutations in TP53, the "Guardian of the Genome"
- Increased anti-apoptotic proteins (e.g., Bcl-2)
- Reduced pro-apoptotic factors
- Autophagy, a cellular process for organelle breakdown and recycling, can both aid in survival and induce death depending on the stress level for cancer cells.
- Necrosis, uncontrolled cell death, can promote tumor-supportive inflammation by releasing factors that activate immune cells.
Enabling Replicative Immortality
- Telomerase, an enzyme that maintains telomere length, is activated in cancer cells, enabling unlimited cell division.
- Telomerase also contributes to DNA repair, resistance to apoptosis, and signaling by the Wnt pathway.
Inducing Angiogenesis
- Angiogenesis, the formation of new blood vessels, is essential for tumor growth.
- Cancer cells produce pro-angiogenic factors like VEGF-A, stimulating blood vessel formation, while anti-angiogenic factors like TSP-1 are suppressed.
Activating Invasion and Metastasis
- Metastasis occurs in multiple steps, including local invasion, intravasation, extravasation, and colonization of distant tissues.
- The Epithelial-Mesenchymal Transition (EMT) is a key process that allows cancer cells to become more mobile and invasive, changing their cell-cell and cell-matrix interactions.
Deregulating Cellular Metabolism
- Cancer cells exhibit the Warburg effect, utilizing glycolysis for energy even in the presence of oxygen.
- This metabolic shift supports rapid growth and is often driven by oncogenes like RAS and MYC.
Avoiding Immune Destruction
- Cancer cells evade immune destruction by:
- Creating an immunosuppressive tumor microenvironment
- Utilizing factors like TGF-β to inhibit immune responses
- Recruiting and educating immune cells to create a permissive environment
- Producing exosomes that impair T-cell function
- Cancer cells can suppress the immune system by:
- Avoiding immune recognition: Hiding tumor-associated antigens or expressing immune checkpoint molecules that inhibit immune cells
- Instigating an immunosuppressive tumor microenvironment: Producing immunosuppressive cytokines and chemokines, recruiting suppressive immune cells like regulatory T cells and myeloid-derived suppressor cells (MDSCs)
Genome Instability and Mutation
- Cancer cells frequently exhibit genome instability and mutations, leading to increased variation and acquisition of new capabilities.
- These mutations can occur in DNA repair genes, such as BRCA1, or through chromosomal instability (CIN).
Tumor-Promoting Inflammation
- Inflammation in the tumor microenvironment can contribute to cancer progression by:
- Providing growth factors and survival factors
- Aiding in metastasis
- Suppressing immune responses.
- Creating a pro-tumor environment, where inflammatory cells can promote angiogenesis, invasion, and metastasis.
Introduction to Breast Cancer
- Breast cancer is the most common cancer in women, excluding non-melanoma skin cancers.
- 31% of all cancers in women with an estimated 18,000 new cases diagnosed in Australia annually.
- Second leading cause of cancer-related deaths in women (15%)
- 95% five-year survival rate, improved significantly from 72% in 1998.
Risk Factors for Breast Cancer
- 99% of cases occur in women, with an increasing risk with age (77% of cases in those over 50).
- Previous breast cancer diagnosis increases recurrence risk.
- Estrogen exposure through early menarche, late menopause, obesity, and contraceptives increases risk.
- Pregnancy: Nulliparity or late pregnancy increases risk as pregnancy induces terminal differentiation in breast tissue.
- Genetics: Family history, BRCA1/BRCA2 mutations, and other genetic abnormalities increase risk.
- Dense breasts on mammograms correlate with higher risk.
- Past radiation exposure increases risk.
Hereditary Breast Cancer
- 5-10% of cases have a genetic basis.
- More likely to present at a younger age and be bilateral.
- BRCA1/BRCA2 mutations account for 47% of hereditary breast cancer cases.
- BRCA1/BRCA2 mutations are autosomal dominant tumor suppressor genes, increasing the risk of breast, ovarian, prostate, colon, pancreas cancers.
- BRCA1/BRCA2 mutations are rare in sporadic breast cancer.
- Other syndromes associated with breast cancer include Li-Fraumeni (P53 mutation), Cowden's disease (P10), and others.
Pathology of Breast Cancer
- Breast cancer progresses from benign lesions and proliferative conditions to pre-cancerous and cancerous states.
- Benign Lesions: Fibrocystic change, adenosis, fibroadenomas (no increased cancer risk).
- Proliferative Conditions:
- Usual hyperplasia, papillomas, radial scars (slightly increased risk).
- Without Atypia - Mild increased risk of breast cancer (1.5-2x above general population)
- With Atypia - Moderate increased risk (4-5 times) of breast cancer
In Situ Breast Cancer
- Malignant breast cancer cells confined to the ductal-lobular system without invasion through the basement membrane into stroma.
- Cells are morphologically identical and genetically similar to invasive breast cancer.
- Constitutes 20-25% of newly diagnosed breast cancer cases.
- Associated with a high increased risk of invasive breast cancer (10x above general population).
- Classified into two main categories: Ductal (DCIS) and Lobular (LCIS).
Ductal Carcinoma In Situ (DCIS)
- Non-invasive, confined within ducts but with potential to become invasive.
- Accounts for 20-25% of newly diagnosed cases.
- High-risk of progressing to invasive cancer if untreated.
- Treated with surgical excision, clear margins, and often radiotherapy.
- Classified by grade of nuclear atypia: low, intermediate, high.
Paget’s Disease of the Nipple
- Breast cancer cells within epidermis of the nipple.
- Almost always associated with underlying high grade DCIS.
- Clinical: Red, weeping, "eczematous" nipple.
- Mx: Surgical excision with clear margins including associated DCIS (+/- invasive)
Lobular Carcinoma In Situ (LCIS)
- Risk factor for developing lobular invasive carcinoma.
- Can be bilateral and associated with future invasive cancer in either breast.
- Managed through surveillance, anti-estrogen therapy, or rarely, mastectomy.
- "Non-obligate precusor" to invasive lobular carcinoma.
Invasive Breast Cancer
- Invasion of malignant epithelial cells beyond myoepithelial layer/ basement membrane into stroma.
- Potential to metastasize through vessels and lymphatics.
- Most deaths result from distant metastases to organs with impairment of function.
Clinical Presentation of Invasive Breast Cancer
- Discrete mass (lump)/ lumpiness
- Pain
- Nipple changes/discharge
- Skin changes (tethering, peau d’orange, ulceration etc)
- Other (including distant manifestations)
Workup for Invasive Breast Cancer
- Examination – breast, axilla, general
- Pathology – Fine needle aspiration or core biopsy
- Radiology – MMG, US, MRI
Histological Types of Invasive Breast Cancer
-
80% of cases are invasive ductal carcinoma (IDC) of 'no special type' (NST).
- About 10% are invasive lobular carcinoma (ILC).
- Remainder are ‘special’ types of carcinoma, most considered variants of IDC.
- Common types:
- Mucinous
- Tubular
- micropapillary (different prognoses).
Spread & Metastasis of Invasive Breast Cancer
- Through lymphatics, commonly to axillary lymph nodes, liver, brain, lungs.
- Staging based on tumor size, node involvement, and presence of metastasis.
- Higher stages predict worse prognosis.
- Staging is by the AJCC system, latest revision 2017 (8th edition).
Grading of Invasive Breast Cancer
- Based on tubule formation, nuclear atypia, and mitotic activity (Grade 1-3).
- Grading is by the modified Bloom and Richardson method (often referred to as Nottingham grade).
Prognostic and Predictive Markers in Breast Cancer
- Prognostic Factors: Determine overall survival and disease progression.
- Predictive Factors: Predict treatment response.
- Three commonly used in Breast Cancer:
- Estrogen receptor (ER)
- Progesterone receptor (PR)
- HER2
Estrogen and Progesterone Receptors (ER/PR)
- Oestrogen and progesterone bind to ER/PR in cytoplasm, migrate to nucleus, transcribe DNA to protein to exert physiological effects.
- Promote growth and differentiation in normal breast tissue.
- Promote a growth advantage for overexpressing malignant cells.
- ER/PR positive: Indicates better response to hormone therapy (tamoxifen, etc.).
- ER/PR negative: 10% response to anti-oestrogen therapy (e.g.tamoxifen).
HER2/neu
- Transmembrane tyrosine kinase (TK) protein.
- Binds ligand (growth factors), forms heterodimers with other HER family proteins, activates intracellular signals.
- Upregulates the RAS-MAPK pathway: Proliferation and invasiveness.
- Upregulates the PI3K pathway: Inhibits cell death.
- Promote growth and differentiation in normal breast tissue.
- HER2 gene amplification and receptor overexpression in ~15-30% BCs.
- HER2 positive: Often more aggressive but can be targeted by specific therapies (trastuzumab).
Molecular Profiling in Breast Cancer
- Early gene expression profiling identified four distinct breast cancer subtypes.
- Luminal A
- Luminal B
- HER2 enriched
- Basal-like
- Prognostic and predictive significance.
- Cost-effective molecular profiling panels (Oncotype DX, Prosigna, Mammaprint) are accepted in clinical use.
Breast Cancer Treatment
- Surgical Options: Lumpectomy, mastectomy depending on extent.
- Radiotherapy: Often used post-surgery to reduce recurrence risk.
- Hormonal Therapy: For ER/PR-positive tumors.
- Chemotherapy and Targeted Therapy: For HER2-positive and high-risk cases.
Overview of Melanoma
- A malignant tumor derived from melanocytes, the cells responsible for melanin production.
- Most commonly arises in the skin.
Importance of Early Detection of Melanoma
- Early-stage melanoma has significantly higher survival rates compared to late-stage detection.
Risk Factors for Melanoma
- Fair skin complexion
- Ultraviolet (UV) radiation exposure
- Large numbers of benign or atypical moles (naevi)
- Family history of melanoma
- History of previous melanoma
- Immunosuppression
- Exposure to harmful chemicals
Development Model for Melanoma
- Benign Naevi: Small, well-circumscribed, even coloration; symmetrical structure, cells predominantly in nests, round to oval, even nuclei.
- Dysplastic Naevi: Larger than benign naevi, irregular borders, and varied coloration; associated with increased melanoma risk, especially in familial cases.
- Melanoma: Asymmetry, irregular borders, color variation, diameter >6mm, evolving characteristics; asymmetrical growth, poorly circumcised, predominant single-cell over nests, disorganized pattern, and invasion into upper epidermal levels.
Growth Phases of Melanoma
- Radial Growth Phase: Melanoma in situ with superficial dermal invasion, characterized by single cells or small nests. Generally lacks metastatic potential.
- Vertical Growth Phase: Expansive growth into the dermis with the formation of larger nests. Presence of mitotic figures indicates metastatic potential.
Prognostic Indicators in Melanoma
- Tumor Thickness: Measured as Breslow thickness.
- Invasion Level: Clark level.
- Ulceration: Associated with poorer outcomes.
- Mitotic Rate: Higher rate correlates with worse prognosis.
- Lymphovascular/Perineural Invasion: Indicates aggressiveness.
- Satellite Lesions: Presence signals potential spread.
Key Genetic Mutations in Melanoma
- BRAF: Mutated in ~66% of melanomas, particularly V600E mutation, activating the MAPK pathway.
- NRAS: Mutations found in ~15% of melanomas.
- KIT: Mutation associated with melanomas in certain sites (e.g., mucosa, nail).
Clinical Implications of BRAF Mutation
- Testing helps identify candidates for BRAF inhibitor therapy, improving survival in metastatic cases.
Overview and Epidemiology of Lung Cancer
- Leading cause of cancer death and the fifth most diagnosed cancer in Australia.
- Higher incidence in females, with a rising trend, and declining incidence in males.
- 5-year survival rate is 17%.
Lung Cancer Risk Factors
- Primary risk factor: Tobacco smoking
-
Additional risk factors:
- Environmental and occupational carcinogens (e.g., asbestos, silica, radon)
- Radiation exposure
- Chronic inflammation (e.g., tuberculosis)
- Pulmonary fibrosis
- Family history (relative diagnosed at a young age, multiple family members)
- Specific inherited conditions (e.g., Li-Fraumeni syndrome, alpha-1 antitrypsin deficiency)
Diagnostic Sampling Techniques for Lung Cancer
-
Transbronchial Fine-Needle Aspiration (FNA):
- Often guided by Endobronchial Ultrasound (EBUS).
-
Percutaneous Transthoracic FNA/Core Biopsy:
- Typically CT-guided.
-
Other Methods:
- Bronchial washings/brushings
- Pleural fluid aspiration
- Endobronchial biopsy
- Sputum collection.
Preparation Techniques
- FNA smear preparation
- Cell block preparation
- Histological techniques (e.g., immunohistochemistry, molecular tests)
Ancillary studies on neoplastic cytology/biopsy specimens
- Histochemical stains (e.g., mucin stains)
- Immunohistochemistry (IHC)
- Sanger and next-generation sequencing (NGS)
- Polymerase chain reaction (PCR)-based techniques
- Fluorescence in-situ hybridisation (FISH)
- Electron microscopy
- Flow cytometry
Major Categories of Lung Cancer
-
Small Cell Carcinoma (14%):
- Usually non-resectable, treated with chemoradiotherapy
- Highly aggressive, linked to smoking, typically in the central lung.
- Characterized by neuroendocrine differentiation, frequent ectopic hormone production, and a high metastatic potential.
- Cytological features: Small cells with scant cytoplasm, granular chromatin, nuclear molding, frequent mitosis, and necrosis.
- Immunohistochemistry Markers: CD56, synaptophysin, chromogranin, and TTF-1.
-
Non-Small Cell Lung Carcinoma (NSCLC):
- Resected if possible.
- Look for “druggable” targets, otherwise, treated with chemoradiotherapy.
NSCLC Types
-
Adenocarcinoma (38%):
- Common in both smokers and non-smokers, with increasing incidence.
- Peripheral origin, commonly metastasizes to adrenal glands, bones, and brain.
- In-Situ Form: Defined by lepidic growth along alveolar walls without invasion, typically non-mucinous with ground-glass appearance on CT.
-
Squamous Cell Carcinoma (20%):
- Strongly linked to smoking, usually central in location, tends to be locally aggressive.
- Histology: Keratinization and intercellular bridges.
-
Large Cell and Other Carcinomas:
- Includes less common types like adenosquamous and sarcomatoid carcinoma.
Oncogenic Drivers and Molecular Subtypes in Lung Cancer
-
The Importance of Small Samples:
- 70% of patients with NSCLC present with unresectable disease.
- A small biopsy/cytology sample may be all that is available.
- Refining a diagnosis is crucial for patient management.
- Careful tissue management for diagnosis, IHC & molecular studies.
-
Subtyping of NSCLC:
- Combining morphology & ancillary studies is feasible and accurate.
- Periodic acid-Schiff + diastase (PASD) for mucin.
- Immunohistochemistry:
- TTF-1: primary lung adenoca
- p40 and CK5/6: squamous markers
EGFR Mutation
- Common in non-smokers, especially in East Asians.
- Exon 19 and 21 mutations predict responsiveness to tyrosine kinase inhibitors (TKIs), which can improve patient outcomes.
-
EGFR-mutated lung adenocarcinoma:
- 10-20% in Western and 30-50% of East Asian patients, particularly women & never smokers.
- Adenocarcinomas with lepidic growth pattern.
- Mutations in exon 19 and 21 are most common.
- Detected by real-time PCR, Sanger sequencing, and next-generation sequencing.
- Predicts response to EGFR tyrosine kinase inhibitors.
ALK Rearrangement
- Found in younger, light or never-smoking patients.
- Frequently co-occurs with solid-signet ring or mucinous patterns; typically detected by FISH, IHC, or NGS.
-
ALK-rearranged lung adenocarcinoma:
- Uncommon, ~4% of all NSCLC.
- Almost always mutually exclusive with other driver mutations.
- Younger patients, light or never smokers.
- Adenocarcinoma with solid-signet ring or mucinous cribriform pattern.
- Detection by IHC, FISH and NGS (but FISH is the “gold standard”).
- Targeted therapy (e.g., crizotinib) has shown significant efficacy in ALK-positive patients.
KRAS Mutation
- Associated with poor prognosis; common in smokers.
Importance of Small Biopsy Samples in Molecular Testing
- Small samples from unresectable NSCLC are crucial for diagnosing and selecting targeted therapies.
- Subtyping and tissue management are essential for optimal diagnosis and molecular testing.
Immune Checkpoint Inhibitor Therapy
- Tumors can evade immune detection by exploiting inhibitory immune checkpoints such as the PD-1/PD-L1 pathway.
- Antibodies that block this pathway offer a new approach to treatment in advanced/metastatic NSCLC.
PD-L1 Expression
- High PD-L1 expression (≥50%) in NSCLC qualifies patients for pembrolizumab, which is effective in prolonging survival.
- Testing for PD-L1:
- Routine in advanced NSCLC to guide immunotherapy.
Conclusion - Key Focus Areas:
- Risk factors and types of lung cancer.
- The role of molecular diagnostics, including subtyping NSCLC and identifying actionable mutations.
- Application of checkpoint inhibitors in advanced NSCLC based on PD-L1 status.
- **
Overview of Leukaemia
- Definition: Cancer of white blood cells, originates in bone marrow from a precursor cell.
- Cause: Genetic defects leading to uncontrolled growth of abnormal cells, overtaking normal blood cell development.
Categories of Leukaemia
- Acute (rapid progression, immature cells) vs. Chronic (slow progression, mature cells).
- Myeloid or Lymphoid lineage.
Types of Leukaemia
-
Acute:
- Any age: neonate - adult.
- Mutation in primitive cell.
- Continue to replicate.
- Do not mature.
- Leukaemia cells are all immature (“blast”) cells; no function.
- Without treatment, short survival.
- With treatment, some can be cured.
-
Chronic:
- Adults.
- Mutation in primitive cell.
- Low replication rate.
- Cells mature.
- Leukaemia resembles normal blood cell; but do not have normal function.
- Without treatment, can have long survival.
- With treatment, few are cured.
ALL (Acute Lymphoblastic Leukaemia)
- Often affects children, high cure rate in young patients (85% in ages 2-5), with B-cell lineage common (85%).
-
Cell Markers:
- Expresses B-cell associated antigens: CD10, CD19, cytoCD79a.
- Expresses markers of immaturity: CD34, nuclear TdT.
- Gating on cells with weak CD45 expression and low side scatter.
- Cytogenetics: Prognosis varies with age and genetic changes; hyperdiploidy and specific translocations (e.g., t(12;21)) linked to better outcomes.
AML (Acute Myeloid Leukaemia)
- More common in adults, diverse subtypes, characterized by high replication of myeloblasts without maturation.
- Morphology and Subtypes: Myeloblasts vary in appearance, from myeloblastic to promyelocytic forms.
- Genetic Markers: Specific chromosomal abnormalities (e.g., t(8;21), t(15;17)) inform prognosis; next-gen sequencing is used for detailed molecular analysis.
- Promyelocytic Subtype: Notable for clotting complications, treated effectively with all-trans retinoic acid and arsenic trioxide.
Management of Acute Leukaemia
- Treatment: Chemotherapy, stem cell transplant, and supportive care (e.g., blood transfusions, antibiotics).
- Targeted Therapy: Antibodies and small molecule inhibitors (e.g., FLT3 inhibitors for AML with FLT3 mutations).
- Prognosis: Varies widely, with factors like cytogenetics influencing survival.
CML (Chronic Myeloid Leukaemia)
- Affects adults, often asymptomatic initially, marked by the Philadelphia chromosome (t(9;22)), treated with Tyrosine Kinase Inhibitors (TKIs).
-
Clinical Phases:
- Chronic phase (longer survival), progresses to blast phase (acute, aggressive phase).
- Treatment: TKIs like Imatinib revolutionized treatment, improving survival rates from 45% to around 90%.
- Monitoring: Blood tests showing increased neutrophils, eosinophils, basophils, and immature cells indicate disease stage.
CLL (Chronic Lymphocytic Leukaemia)
- Common in elderly, often asymptomatic at diagnosis.
- Symptoms: Lymphadenopathy, splenomegaly, anemia, susceptibility to infections.
- Cell Markers: Expresses B-cell markers (CD19, CD5, CD23).
- Genetic Risk Factors: Specific deletions (e.g., del17p, poor prognosis) guide treatment strategy.
- Management: Often "watch and wait," treatment initiated upon symptom progression using multi-agent chemotherapy, anti-CD20 antibodies (e.g., Rituximab), or newer inhibitors like Venetoclax.
Summary and Learning Objectives
- Differentiation between acute and chronic leukaemias and myeloid vs. lymphoid lineages.
- Recognition of genetic and cytogenetic markers in diagnosis and prognosis.
- Treatment approaches vary widely from supportive care to targeted therapies and stem cell transplantation.
- Knowledge of different presentation patterns, disease pathology, and outcomes in leukaemia types.
- **
Introduction to Multiple Myeloma
-
Plasma cell malignancy arising in the bone marrow causing destruction of:
- Bone
- Kidneys
- Other organs (heart, nervous system)
-
Part of the plasma cell dyscrasias including:
- MGUS (Monoclonal Gammopathy of Uncertain Significance)
- Smouldering Multiple Myeloma
- Multiple Myeloma
- Plasma Cell Leukaemia
- Plasmacytomas
- Waldenstrom’s Macroglobulinemia
- Others: POEMS disease, TEMPI disease, Amyloidosis
Plasma Cell Dyscrasias
- MGUS affects 1-3% of people aged >50 years old.
- Risk of MGUS → Myeloma is ~1% per year.
- Risk of MGUS → SMM or SMM → Myeloma is ~10% per year.
Haematopoiesis & Plasma Cells
Epidemiology
- Usually affects people aged 60-70 years old.
- Affects 2,600 Australians every year.
- 13% of all blood cancer diagnoses in Australia (1% of all cancers).
- 5-year average survival rate is ~55%.
Risk Factors:
- Elderly age
- Male gender
- Black race
- Family history of myeloma / plasma cell dyscrasia
- Radiation + chemical exposure (e.g., pesticides)
- Obesity
- Certain genetic syndromes (e.g., Down syndrome)
Multiple Myeloma Signs and Symptoms
- Bone Pain: Most common symptom, often located in the back, ribs, pelvis, or skull.
- Fatigue & Weakness: Due to anemia, a common complication of myeloma.
- Frequent Infections: Weakened immune system makes patients susceptible to infections.
- Kidney Problems: Myeloma proteins can damage the kidneys, leading to impaired kidney function.
- Hypercalcemia: High blood calcium levels can cause confusion, constipation, and kidney stones.
- Enlarged Spleen & Liver: May occur due to myeloma cells infiltrating these organs.
- Neurological Problems: May occur if the myeloma cells infiltrate the spinal cord or nerves.
Diagnosis
-
Blood Tests:
- Complete Blood Count (CBC): Shows anemia, thrombocytopenia, and white blood cell abnormalities.
- Protein Electrophoresis: Detects the presence of abnormal proteins in the blood, known as M-protein.
- Immunofixation Electrophoresis: Identifies the specific type of M-protein.
-
Urine Tests:
- Bence-Jones Protein: Detects the presence of light chains (small proteins) in the urine.
- Bone Marrow Aspiration and Biopsy: Confirms the diagnosis, showing the presence of cancerous plasma cells in the bone marrow.
-
Imaging Studies:
- X-rays: Reveal lytic lesions (holes) in the bones.
- MRI: Provides detailed images of the bones and surrounding tissues.
- PET Scan: Helps detect the spread of myeloma to other areas of the body.
Treatment Approaches:
- Chemotherapy: Used to kill myeloma cells, often in combination with other therapies.
- Immunotherapy: Uses the body's immune system to target and destroy myeloma cells.
- Targeted Therapy: Drugs that specifically target proteins involved in myeloma cell growth.
- Stem Cell Transplant: Used to replace the bone marrow after high-dose chemotherapy.
- Radiation Therapy: Used to treat localized myeloma tumors or bone pain.
- Supportive Care: Includes pain management, treatment of infections, and management of kidney problems.
Prognosis
- Prognosis for multiple myeloma varies greatly depending on various factors:
- Stage of disease: Early stages have a much better prognosis than advanced stages.
- Cytogenetics: Certain genetic abnormalities in the myeloma cells predict worse outcomes.
- Patient's overall health: Older patients and patients with other medical conditions tend to have a poorer prognosis.
Monitoring
- Regular blood tests to monitor:
- Haemoglobin levels
- Kidney function
- Calcium levels
- Myeloma protein levels
- Bone marrow biopsies to monitor the response to treatment.
- Imaging studies to detect relapse or progression of the disease.
- **
Multiple Myeloma
- Malignant plasma cell neoplasm that arises in the bone marrow leading to destruction of bones, kidneys, and potentially other organs.
- A member of the plasma cell dyscrasias, which include MGUS, smoldering multiple myeloma, plasma cell leukemia, POEMS disease, and amyloidosis.
- Affects individuals aged 60–70 years
- 13% of blood cancers and 1% of all cancers in Australia with 2,600 new cases annually.
- 5-year survival rate of ~55%.
- Risk factors include older age, male gender, Black race, family history of plasma cell disorders, exposure to radiation or chemicals like benzene, HIV, and a history of MGUS.
- TP53 mutations and cell cycle disruptions are common, impacting disease prognosis and progression
- Genetic abnormalities, like del13 and del17p, influence prognosis.
- Translocations such as t(11;14) lead to overexpression of cyclin D1, associated with a more favorable prognosis.
Diagnostic Criteria and Tests
- SLiM CRAB criteria used to diagnose multiple myeloma:
- 60% or more plasma cells in bone marrow.
- Light chain ratio abnormalities.
- MRI bone lesions.
- CRAB: Calcium elevation, Renal failure, Anemia, and Bone lesions.
- Key Diagnostic Tests:
- Blood tests: Assess hemoglobin, renal function, and calcium levels.
- Skeletal survey: CT or X-ray to identify bone lesions.
- Bone marrow biopsy: Quantifies plasma cells (≥10% required for diagnosis with CRAB features).
- Serum protein electrophoresis (SPEP): Separates blood proteins to identify abnormal M-spikes indicative of monoclonal paraproteins.
- Immunofixation: Identifies specific paraproteins (e.g., IgG lambda) after an abnormal M-spike is detected.
Diagnostic Techniques and Their Findings
- Abnormal monoclonal paraprotein:
- Blood: Serum protein electrophoresis
- Urine: Bence Jones protein
- Elevated serum free light chains
- Serum Protein Electrophoresis:
- Measures different fractions of blood proteins (globulins) separated by an electric current
- Blood serum is applied to a buffered agarose gel matrix (pH ~8.6)
- Current applied - Globulins are separated based on:
- Charge (electric force): Determined by sum of charge of amino acids
- Size of globulin (endo-osmotic force)
- Albumin is the most negatively charged and moves the furthest to the anode
- γ-globulins rely on endo-osmotic forces and move in the opposite direction → Cathode (-)
- Immunofixation:
- Once an abnormal M-spike is identified, it is important to identify the specific monoclonal paraprotein causing the spike
- Incubating agarose gel with antibodies against the different types of immunoglobulin by specific staining (chromogen) for antigen-antibody complexes which form:
- IgG, A, M (generally)
- Light chains (kappa, lambda)
- The specific paraprotein is then both identified + quantified
- Correlated with quantified immunoglobulin levels (serum)
- Usually undertaken simultaneously with serum protein electrophoresis
- Blood Film:
- Shows anemia, rouleaux formation, and the presence of circulating plasma cells in multiple myeloma.
- “Blue-ish” tinge to background → Monoclonal paraprotein
Bone Marrow Biopsy
- Aspirate:
- Liquid sample
- Romanowsky stain
- Flow cytometry
- Trephine:
- Solid bone component
- Histology
- Histological assessment of the marrow: → Preserved architecture of cells and their relationship to each other + bone → Not influenced by peripheral blood contamination
- Involves 2 x major assessments:
- Haematoxylin & Eosin (H&E) staining.
Flow Cytometry
- Quantifies plasma cells and detects prognostic markers (e.g., CD138 for plasma cells, CD38 for diagnosis, CD56 for poor prognosis).
- Detection of plasma cells allows for:
- Quantification → Aids diagnosis of myeloma vs.MGUS/SMM
- Prognostic implications (red = poor prognosis in myeloma)
Cytogenetics
- Karyotyping + Fluorescence in situ hybridisation (FISH)
- Most common is t(11;14)(q13;q32) translocation
- Involves CCND1 leading to overexpression of cyclin D1
- Associated with a good prognosis
- Can also identify other changes:
- Hyperdiploidy
- Aneuploidy
- Chromosomal loss, e.g.del13, del17p (TP53)
Immunohistochemistry
- Uses markers like CD138 (high sensitivity for plasma cells) and MUM1 to stain and identify plasma cells in bone marrow trephine sections.
- Skeletal Survey (CT / X-Ray)
- Prognostic and Treatment Considerations
Prognostic Assessment
- The Revised International Staging System (R-ISS) is used, combining genetic markers with clinical features to assess disease severity and outcomes.
- Poor prognosis linked to genetic abnormalities like del17p.
Treatment Options
- Depends on prognosis and general patient fitness.
- General options include (either alone or in combination):
- Combination chemotherapy, e.g.VRD (Bortezomib, Lenalidomide, Dexamethasone)
- Monoclonal antibodies, e.g.Daratumumab
- Salvage, high dose chemotherapy, e.g.D-PACE
- Autologous stem cell transplantation
- Targeted radiotherapy (plasmacytomas)
- Bisphosphonate therapy
- Blood transfusion support
- Palliative / Comfort Care etc
Relapse Monitoring
- Routine checks include symptom tracking, blood tests, paraprotein levels, skeletal imaging, and potentially repeated bone marrow biopsy if relapse is suspected.
- Clinical Features:
- Constitutional Symptoms
- Bone Pain
- Blood Tests → Haemoglobin, calcium, renal function
- Paraprotein Levels + Serum Free Light Chains
- CT skeletal survey
- If relapse is suspected based on above:
- Repeat bone marrow biopsy!
- Consider alternative treatments (if available)
Conclusion
- Multiple myeloma is a complex, heterogeneous disease requiring personalized diagnostic and treatment approaches.
- The diagnostic and treatment paradigms are evolving, with translational research crucial for refining prognostic profiling and improving outcomes.
- Myeloma is a heterogenous disease
- Pathobiology involves multiple components of the Cancer Model
- Therapeutic targets often work in combination to target multiple abnormalities
- Disease evolution occurs leading to relapsing and treatment refractory disease
- Diagnostic and treatment paradigm is constantly changing:
- Becoming more “personalised” to the patient’s disease profile
- Ongoing translational research is required!
- Good and accurate diagnosis means adequate prognostic profiling
- Enables access to the right treatment + improves disease outcomes
Bowel Cancer
- Malignant neoplasm of the bowel, usually adenocarcinoma of the large bowel (colorectal carcinoma).
- Other types less common include lymphomas, neuroendocrine tumors, GIST, sarcomas, metastases from other organs, and others.
- Benign and intermediate-grade tumors include:
- Benign polyps (neoplastic - hyperplastic polyp; non-neoplastic - hamartomatous polyp, inflammatory polyp, others)
- Pre-malignant polyps (tubular/tubulovillous/villous adenoma, sessile serrated lesion/adenoma)
- Adenocarcinoma of the small bowel is less common but similar spectrum of tumours occur there.
Overview of Colon Cancer
- Definition:
- Malignant neoplasm, commonly adenocarcinoma, of the large bowel.
- Other bowel cancers include lymphomas, neuroendocrine tumors, gastrointestinal stromal tumors (GIST), and metastases.
- Significance:
- Common and potentially curable if detected early.
- High morbidity and mortality rates, second most common cancer in Australia.
Epidemiology
- 17,000 new diagnoses and 4,000 deaths per year in Australia.
- Higher risk in older adults, men more than women.
- Lifetime risk: ~1 in 10 for development, ~1 in 46 for mortality.
Risk Factors
- Family history and genetic predisposition increase risk significantly.
- Other risks: inflammatory bowel disease, obesity, diet high in processed/red meat.
- Primarily a disease of older adults
- Approx 10% are under 50, however approx 5% under 40
- Family history and genetic factors important
- Relative risk increases by approx 1.5x with 1 first degree relative affected
- 3x with two or more first degree relatives.
- If relative had bowel cancer under 45, RR is 5x.
- Other risk factors:
- Inflammatory bowel disease
- Obesity
- Diet high in processed meat, red meat
- 5 year survival has dramatically improved since the 1980s, (66%)
- Early detection and treatment
- Identification of high risk individuals
- New drugs (‘targeted therapy’)
Carcinogenesis and Genetic Pathways
- Cancers occur as a result of clonal expansion of a single precursor cell line
- This occurs due to acquisition of multiple non-lethal genetic mutations (variations) or ‘hits’ (Knudson hypothesis)
- Some people are more genetically susceptible
- Some cells are more susceptible
- These primarily occur in one of four classes of regulatory genes
- Growth promoting proto-oncogenes (gain of function)
- Growth inhibiting tumour supressor genes (loss of function)
- Genes that regulate cell death (pro-apoptotic)
- Genes involved in DNA repair
- With many genes, both alleles must be affected before phenotype is altered
- Carcinogenesis is therefore a multistep process at the genetic level, and this is reflected phenotypically as a progression of precursor lesions, as additional ‘hits’ occur, combined with changes in epigenetic signalling, tumour/immune system interactions etc.
Mechanism
- CRC arises from clonal expansion and non-lethal genetic mutations in four regulatory gene classes:
- Proto-oncogenes.
- Tumor suppressor genes.
- Apoptosis-regulating genes.
- DNA repair genes.
Genetic Pathways
- Most CRC arise from sporadic mutation of cancer causing genes, while a subset arise from inherited mutations.
- Most familial cases are not well understood, but FAP and Lynch syndrome are both important in overall understanding of CRC carcinogenesis.
- CRC is heterogenous in phenotype, genotype and pathogenesis, and covers the same spectrum of behaviour regardless of pathway, however pathway is relevant to treatment, risk for other family members and understanding of tumour biology
- Most CRC, regardless of triggers, result in activation of the WNT, MAPK or PI3K pathways leading to growth promotion and anti-apoptosis, as well as inactivation of the TGF-B and p53 inhibitory pathways.
- The two most important pathways are the Chromosomal instability pathway (Adenoma-Carcinoma sequence) and the Serrated (Microsatellite instability) pathway.
Mechanism of genetic change in colon cancers:
- Chromosomal Instability Pathway (Adenoma-Carcinoma Sequence):
- High somatic alterations, DNA gains/losses.
- resulting in high levels of somatic copy-number alterations and DNA gains/amplifications or losses/deletions (Chromosomal Instability Pathway / Adenoma-Carcinoma Sequence)
- Microsatellite Instability (MSI) Pathway due to defective DNA mismatch repair (MMR):
- DNA mismatch repair defects; high mutation rates.
- leading to high mutation rate (MSI / serrated pathway, although note that MMR gene abnormalities are common as later events in both other pathways as well).
- Most of these tumours show CpG island hypermethylation
- Defective DNA polymerase proofreading, POLE Pathway:
- DNA polymerase proofreading defect, very high mutation rate but mostly silent mutations.
- with a very high mutation rate, affecting large numbers of genes.
- Most of these are silent ‘passenger’ mutations, with some mutations occurring in driver genes (POLE pathway) *we won’t discuss this pathway in detail today
How Does Colon Cancer Develop (precursors)
- ‘Adenoma-carcinoma’ Sequence – usually occurs in chromosomal instability pathway
- Adenoma:
- Macroscopic: large, exophytic, obstructing, irregularly shaped, ulcerated and haemorrhagic surface, complexity caused by tortuous folds and fusion of glandular structures.
- Microscopic: infiltrative, irregular glands, variable architecture (can be solid, papillary, mucinous, tubular or a mix), often with desmoplastic stromal reaction and usually with intraluminal necrosis and inflammatory cells (‘dirty’ necrosis).
- Adenoma:
- Serrated / Microsatellite Instability Pathway
- Defects in mismatch repair genes (MLH1, MSH2 and others) leads to microsatellite instability, which creates an environment allowing accelerated accumulation of mutations in numerous genes.
- Depending on the genes affected, this can lead to cancer.
- In the colon, this often includes BRAF, which can trigger the serrated pathway.
Key Mutations
- Activation of WNT, MAPK, PI3K pathways; inhibition of TGF-B, p53.
- APC, TP53, KRAS mutations common in sporadic CRC cases.
Development of Colon Cancer: Stages
- Normal Mucosa: No abnormalities.
- Mucosa at Risk: Mild histological changes; early mutations.
- Adenoma: Low-grade dysplasia; additional mutations.
- Advanced Adenoma: High-grade dysplasia; mutations accumulate.
- Carcinoma: Invades bowel wall, less differentiated.
Familial Colon Cancer Syndromes
- Most colon cancers are sporadic.
- Undefined/unknown mutations explain the majority of CRC in familial settings, but the known mutations are very important to understand.
Familial Colon Cancer 1- Familial Adenomatous Polyposis (FAP)
- Autosomal dominant (1 in 10 - 30 000)
- 20% of FAP cases are new germline mutations acquired during embryogenesis
- 100% risk of colon cancer by age 40
- Mutation in APC gene at 5q21 (or rarely MYH gene)
- ‘Carpet’ of >100 adenomas increases probability of second, third hits
- Prophylactic total colectomy by age 25, screening of relatives
Familial Colon Cancer 2- Familial Adenomatous Polyposis (FAP):
- Autosomal dominant, APC gene mutation, 100% cancer risk by age 40.
- Managed by prophylactic colectomy and family screening.
- Hundreds of polyps carpeting the large bowel
Familial Colon Cancer 3- Hereditary Nonpolyposis Colorectal Cancer (HNPCC/Lynch Syndrome):
- Fewer polyps, mismatch repair gene mutation.
- Associated with multiple cancer types; requires regular screening.
- Autosomal dominant (1 in 600 - 2000)
- Fewer adenomatous polyps than FAP, more than sporadic cancers
- Mutations in mismatch repair gene(s) MLH1 or MSH2 (most) as well as MSH6, PMS2, and EPCAM
- Results in inherited microsatellite instability (MSI)
- Increased risk of bowel, endometrial, bladder, gastric and skin cancers
- “Amsterdam criteria” for genetic testing: 3 or more family members with CRC (at least one first degree), two successive generations, at least one before age 50, FAP excluded.
- “Bethesda criteria” for genetic testing: CRC
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This quiz covers the fundamental aspects of neoplasms, including the differences between benign and malignant tumors, the importance of reactive stroma, and key tumor classification systems. It also explores various grading systems and the factors influencing cancer prognosis. Test your knowledge on tumor morphology and metastasis.