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Questions and Answers
Which mycotoxin is known to cause equine eucoencephalomalacia (ELEM)?
Which mycotoxin is known to cause equine eucoencephalomalacia (ELEM)?
Which of the following symptoms may be caused by aflatoxin exposure in animals?
Which of the following symptoms may be caused by aflatoxin exposure in animals?
What is the primary method used to detect Fusarium species in Ireland?
What is the primary method used to detect Fusarium species in Ireland?
Which environmental factors can influence the growth of mycotoxin-producing fungi?
Which environmental factors can influence the growth of mycotoxin-producing fungi?
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Which mycotoxin has been suspected as a human carcinogen by IARC?
Which mycotoxin has been suspected as a human carcinogen by IARC?
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What is the adverse effect attributed to deoxynivalenol (DON)?
What is the adverse effect attributed to deoxynivalenol (DON)?
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Which crop is most commonly associated with ochratoxin A contamination?
Which crop is most commonly associated with ochratoxin A contamination?
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Which of the following fungi is known for producing aflatoxins?
Which of the following fungi is known for producing aflatoxins?
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What is the main cause of seedling blight in cereal crops?
What is the main cause of seedling blight in cereal crops?
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Which of the following symptoms is NOT associated with seedling blight?
Which of the following symptoms is NOT associated with seedling blight?
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Which fungus is primarily responsible for causing seedling blight within the Fusarium group?
Which fungus is primarily responsible for causing seedling blight within the Fusarium group?
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What does legislation typically impose regarding mycotoxins in grain?
What does legislation typically impose regarding mycotoxins in grain?
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What type of conditions can lead to increased risk of Fusarium ear blight?
What type of conditions can lead to increased risk of Fusarium ear blight?
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Which of these fungi is NOT typically involved in soil-borne infections leading to seedling death?
Which of these fungi is NOT typically involved in soil-borne infections leading to seedling death?
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What is a common outcome for seedlings that are affected by seedling blight?
What is a common outcome for seedlings that are affected by seedling blight?
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Which management practice is crucial for preventing Fusarium seed-borne infections?
Which management practice is crucial for preventing Fusarium seed-borne infections?
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What is the recommended action if 20% or more of the tillers are affected by eyespot at GS 30/31?
What is the recommended action if 20% or more of the tillers are affected by eyespot at GS 30/31?
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Which fungus type is currently the dominant species responsible for eyespot infections?
Which fungus type is currently the dominant species responsible for eyespot infections?
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What environmental conditions are necessary for the infection of crops by the eyespot fungus?
What environmental conditions are necessary for the infection of crops by the eyespot fungus?
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What is a serious consequence of severe eyespot in crops?
What is a serious consequence of severe eyespot in crops?
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How long can the eyespot fungus survive on stubble?
How long can the eyespot fungus survive on stubble?
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Which crops are considered at greatest risk for eyespot infection?
Which crops are considered at greatest risk for eyespot infection?
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What stage of the eyespot fungus's life cycle produces ascospores that can infect young plants?
What stage of the eyespot fungus's life cycle produces ascospores that can infect young plants?
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What factor increases the risk of eyespot infection in crops?
What factor increases the risk of eyespot infection in crops?
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Study Notes
Fungal Diseases - Foot and Root Rots
- These diseases affect foot and root systems of crops.
- Dr. Josephine Brennan, Department of Agriculture, Fisheries & Food, Celbridge, Kildare, presented these notes on 07/11/2016.
Types of Diseases
- Seed Diseases: Loose/Covered smut, Bunt, Seedling blight
- Foliar Diseases: Rhyncosporium, Ramularia, Net blotch, Brown rust, Yellow rust, P. Mildew, Septoria
- Stem based diseases: Eyespot, Fusarium
- Foot/Root diseases: Take-all, Fusarium
- Ear diseases: Fusarium, Ergot. Foliar diseases can also affect the ear (Septoria, Yellow/Brown rust, P. Mildew)
- Viral Diseases: BYDV
Questions about diseases
- What are rusts? (This requires further detail)
- What is a haustoria? Function? (Requires further detail)
- What is a biotroph? (Requires further detail)
- What is an obligate parasite? (Requires further detail)
- What is a Heteroecious parasite? (Requires further detail)
- What are smuts? (Requires further detail)
- What is covered smut? (Requires further detail)
- What is loose smut? (Requires further detail)
- What is bunt? (Requires further detail)
Cereal Foot and Root Rots
- The fungus is commonly introduced into an area by infected plants or on machinery.
- Foot and root rot diseases can survive in the soil for several years as spores.
- Complete removal is often difficult or impossible.
- Fusarium Foot Rot Complex: F.culmorum, F.avenaceum, F.graminearum, F. poae & M.nivale
- Take-All Disease: Gaeumannomyces graminis
- Sharp Eyespot & True Eyespot: Rhizoctonia cerealis, Peudocercosporella herpotrichoide
- Common Root Rot: Bipolaris sorokiniana
Fusarium foot rot complex
- There are many Fusarium species that affect cereals.
- These fungi form a complex of diseases on seeds, seedlings and adult plants.
- Microdochium nivale (formally called Fusarium nivale) is included in this group of fungi.
- Consequences: yield loss, loss in grain quality, mycotoxin contamination
Symptoms
- Common symptoms are poor plant establishment (thin crop), root rotting, brown foot rot, and leaf blotching.
- Glume blotch and ear blights can be caused by these fungi.
- Severe foot rot can affect plants under moisture stress, causing premature ripening and whiteheads.
What is a mycotoxin?
- Mycotoxins are toxic secondary metabolites produced by certain fungi.
- The term "mycotoxin" usually refers to the toxic chemical compounds produced by fungi that colonize crops.
- Examples of mycotoxins and crops they are found in are discussed in the table below.
Table 1. Mycotoxins in Grains and Seeds
(Data from the table in the document)
Trichothecene Mycotoxins
- Deoxynivalenol (DON) is an example:
- Adverse effect on human and animal health and plant health.
- Inhibitors of protein synthesis.
What range of mycotoxin-producing Fusarium species do we have in Ireland?
- Based on DNA-and GC-MS-detection methods, species like M. nivale, F. avenaceum, F. graminearum, F. culmorum, and F. poae produce mycotoxins and are present in Ireland.
Legislation and Risk of Ear Blight
- Legislation limits the level of certain mycotoxins (e.g., DON) in grain.
- The presence of Fusarium ear blight might not always indicate a high risk for mycotoxins in cereal crops.
Seedling Blight
- Seedling blight is a fungal infection that can cause seed or young seedlings to rot and die.
- There may be brown spots on the coleoptile and/or roots.
- Fields might exhibit patches that fail to germinate. Seedlings (if they germinate) may not emerge or turn brown, pinched, and die.
- Other symptoms include stunted and yellow growth, or reduced root growth with brown spots on the roots and coleoptile.
Other symptoms
- Among the fungi present in the soil are Pythium spp., Fusarium spp., Rhizoctonia spp. Most of the infection is soil-borne but can also be seed-borne.
- M. nivale is a primary pathogen in the Fusarium group.
Effects of Microdochium nivale
- Microdochium nivale is a key part of Fusarium seedling blight in wheat crops.
- Its primary source in wheat crops is the seed.
- Wet conditions during flowering and grain formation in a season can increase seed-borne infection risk significantly.
Take-All
- Take-all is a cereal disease that infects the plant's roots, blocking conductive tissue, causing water intake problems, and resulting in stunting and yellowing
- Characteristic "white heads" may appear in healthy crops.
- Affected plants easily pull out of the ground because of poor root development.
- Above-ground symptoms include stunted growth and white-heads ("bleached" ears) with low grain yield.
Life Cycle
- The fungus survives the winter as mycelium on roots, stubble, volunteer cereals, early autumn-sown crops, or some grass weeds.
- Primary infection occurs in autumn from inoculums in the soil. Secondary (root-to-root) infection is mostly seen in spring and summer. The disease spreads from infected seedling roots to developing crown roots as the season progresses.
Factors influencing take-all
- Weather: Regional differences in take-all are related to weather, soil type, and cropping systems. Crops on light soils are most affected due to easier spread of the fungus.
- Management: Well-managed crop rotations normally control take-all in a succeeding cereal. Ploughing buries take-all inoculum, while min-till exposes soil allowing for quicker infection of a succeeding cereal crop, although leaving a more firm seedbed.
- Volunteer cereals and grass weeds: Cereal volunteers and grass weeds carry the take-all fungus through break crops increasing the risk.
- Varieties: Take-all inoculum decreases quickly after harvest. Risk is decreased in consecutive crops with later-sown crops potentially at higher risk.
Control
- Treat seed with seed treatment fungicides to control disease.
- Avoid sowing into previous grass-based ground.
- Use crop rotations to avoid growing consecutive cereal crops.
Sharp eyespot - Rhizoctonia cerealis
- Sharp eyespot of wheat is caused by the soil-borne fungus Rhizoctonia cerealis.
- Symptoms in wheat include sharply defined lesions on the leaves and stems, specifically on the lower stems. Typical symptoms of the disease include a dark margin. Often, a dark, diffuse, central 'pupil' is visible.
- Rhizoctonia cerealis does not produce spores but instead has mycelium branching at right angles.
- Eyespot reduces yield and grain quality by restricting water and nutrient intake. Severe eyespot can cause lodging (stem weakness)
Bipolaris sorokiniana - Common Root Rot
- Bipolaris sorokiniana is a saprophyte that can infect barley, spring wheat, rye, and weed and grass species.
- Wheat and barley are of most economic importance in the case of this infection.
- Common root rot occurs in cereal-growing, warmer areas.
- Initial symptoms in seedlings often originate from seed or from soil borne conidia. Dark brown lesions appear on the outer coleoptile tissue and/or on the leaf base. Coalesced lesions may result in long areas of necrotic tissue. Entire seedlings may die but surviving plants will only show stunted growth.
- Sporulation of spores is typical in infected regions of leaf blades.
Life Cycle of Bipolaris sorokiniana
- The fungus overwinters primarily as mycelium on infected stubble and grass weed volunteers, acting as an inoculum source.
- It can also survive as mycelium in soil or crop debris.
- The sexual stage (Cochliobolus sativus) is largely insignificant in the disease cycle.
- Primary inoculum includes mycelium from infected seed, conidia in the soil, and conidia on the seed surface.
- Conidia germinate in the presence of susceptible hosts (like roots or coleoptile), initiating primary infection.
- B. sorokiniana infects host tissue directly or through natural openings or wounds.
Control of Root Rot
- Historically cultural methods (e.g., crop rotation) have been significant in controlling eyespot.
- Now there is increasing importance of cultural control because of increased non-cereal break crops and reduced fungicide use.
- Seed treatment is often used in the prevention of root rot.
Summary of Diagnostic Features
(Table from slide 111 that summarizes the main diagnostic features of the stem base pathogens)
Causal Organisms, Symptoms, and Spores
(Table from slide 112 that relates causal organisms, symptoms, and spores for Take-All, Sharp eyespot, and Common root rot.)
References
- AHDB publications: https://cereals.ahdb.org.uk/
- Diseases of Small Grain Cereal Crops: A Colour Handbook by T.D. Murray, David W. Parry, Nigel D. Cattlin
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Test your knowledge on mycotoxins, their effects on animals, and the fungi responsible for contamination. This quiz explores the detection methods, environmental factors influencing growth, and legislative aspects related to mycotoxins. Perfect for students and professionals in agricultural sciences.