Molecular Biology PhD Entrance Exam 2023-2024

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Questions and Answers

If you have a strain of bacteria that produce nonfunctional sigma factor, which step of transcription would you expect will be affected?

  • These bacteria will produce defective mRNA.
  • These bacteria will be unable to assemble RNA polymerase onto the DNA strand. (correct)
  • These bacteria will have an increased rate of transcription.
  • These bacteria will be unable to terminate transcription.

Which of the following is not required for the expression of genes in the lactose operon?

  • RNA polymerase
  • Lactose
  • Promoter
  • Adenylate cyclase (correct)

Which of the following statements is not correct?

  • Bacteria have multiple sigma factors.
  • Sigma factors are involved in promoter recognition.
  • RNA polymerase is essential for transcription.
  • Bacteria possess only one type of RNA polymerase. (correct)

What does the CAP protein stand for?

<p>Catabolite gene activator protein. (D)</p> Signup and view all the answers

Which sigma factor is highly heat stable?

<p>σ32 (B)</p> Signup and view all the answers

Gene imprinting involves:

<p>DNA methylation (A)</p> Signup and view all the answers

Which of the following sequences can undergo methylation?

<p>AGGTTC (A)</p> Signup and view all the answers

What is the functional product of the Xist gene?

<p>lncRNA (A)</p> Signup and view all the answers

What is the primary function of the CAP protein?

<p>To activate gene transcription (A)</p> Signup and view all the answers

Which type of RNA polymerase is found in bacteria?

<p>Only one type of RNA polymerase (C)</p> Signup and view all the answers

Which of the following statements about enhancers is false?

<p>They work as both cis and trans-acting sequences. (A)</p> Signup and view all the answers

Which of the following processes is involved in gene imprinting?

<p>DNA methylation (C)</p> Signup and view all the answers

Flashcards

Sigma factor

A protein essential for the assembly of RNA polymerase onto DNA, enabling transcription initiation.

Operon

A specific region on a bacterial chromosome that contains genes related to the metabolism of a particular substance, like lactose.

CAP protein (Catabolite activator protein)

A regulatory protein that binds to DNA upstream of the promoter of the lac operon, enhancing transcription when lactose is present.

σ32

A specialized sigma factor found in bacteria that is highly resistant to heat, enabling survival under stressful conditions.

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Gene imprinting

The process by which genes are silenced depending on their parental origin, leading to differential expression depending on which parent the gene is inherited from.

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Methylation sites

Regions in the DNA that can be modified by the addition of a methyl group, affecting gene expression.

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AGGTTC

A specific sequence that can be targeted for methylation, often with regulatory implications.

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Xist RNA

A long non-coding RNA responsible for the inactivation of one X chromosome in female mammals, ensuring dosage compensation.

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CAP protein's function

The primary role of the CAP protein is to activate gene transcription by binding to DNA and influencing the recruitment of RNA polymerase.

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Bacterial RNA Polymerase

Bacteria possess only one type of RNA polymerase, carrying out all transcription tasks.

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Enhancers

DNA sequences that enhance gene transcription by interacting with transcription factors. They cannot act independently as they need to be bound by the transcription machinery.

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DNA methylation

The process of switching off specific genes by attaching a methyl group to DNA, influencing their expression levels.

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Study Notes

Transcription in Bacteria

  • A strain of bacteria with a nonfunctional sigma factor would affect the assembly of RNA polymerase onto the DNA strand.

Lactose Operon

  • Adenylate cyclase is not required for the expression of genes in the lactose operon.

RNA Polymerase in Bacteria

  • Bacteria possess only one type of RNA polymerase.

CAP (Catabolite Gene Activator Protein)

  • CAP is a catabolite gene activator protein.

Sigma Factors

  • Four types of sigma factors are known, and σ32 is highly heat stable.

Enhancers

  • Enhancers do not work as both cis and trans-acting sequences.

Gene Imprinting

  • Gene imprinting involves DNA methylation.

Methylation in Oligonucleotides

  • Methylation is possible within the oligonucleotides at the bases AGGTTC.

Xist Gene

  • The functional product of the Xist gene is lncRNA (long non-coding RNA).

Transcription in Bacteria

  • A strain of bacteria with a nonfunctional sigma factor would affect the assembly of RNA polymerase onto the DNA strand.

Lactose Operon

  • Adenylate cyclase is not required for the expression of genes in the lactose operon.

RNA Polymerase in Bacteria

  • Bacteria possess only one type of RNA polymerase.

CAP (Catabolite Gene Activator Protein)

  • CAP is a catabolite gene activator protein.

Sigma Factors

  • Four types of sigma factors are known, and σ32 is highly heat stable.

Enhancers

  • Enhancers do not work as both cis and trans-acting sequences.

Gene Imprinting

  • Gene imprinting involves DNA methylation.

Methylation in Oligonucleotides

  • Methylation is possible within the oligonucleotides at the bases AGGTTC.

Xist Gene

  • The functional product of the Xist gene is lncRNA (long non-coding RNA).

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