Molecular Biology Module 7: The Genetic Code

Choose a study mode

Play Quiz
Study Flashcards
Spaced Repetition
Chat to Lesson

Podcast

Play an AI-generated podcast conversation about this lesson

Questions and Answers

How many stop codons are present in the genetic code?

  • 1
  • 3 (correct)
  • 6
  • 5

Which amino acid does the start codon AUG code for?

  • Methionine (correct)
  • Arginine
  • Leucine
  • Serine

Why is the genetic code described as degenerate?

  • It only contains three stop codons.
  • Many amino acids are specified by multiple codons. (correct)
  • Some codons do not code for amino acids.
  • There are more amino acids than codons.

What is the primary function of tRNA?

<p>To link amino acids to their corresponding codons. (C)</p> Signup and view all the answers

What paradox is associated with tRNA?

<p>Some tRNAs recognize more than one codon. (C)</p> Signup and view all the answers

What is the role of aminoacyl-tRNA synthetases?

<p>To match tRNA with its corresponding amino acid. (D)</p> Signup and view all the answers

Which of the following statements about the anticodon is true?

<p>It interacts with the codon in mRNA. (B)</p> Signup and view all the answers

How many total codons exist in the genetic code?

<p>64 (C)</p> Signup and view all the answers

What does degeneracy in the genetic code refer to?

<p>Multiple codons coding for a single amino acid (C)</p> Signup and view all the answers

What is the significance of wobble base pairing in tRNA?

<p>It allows flexibility in codon-anticodon interactions (C)</p> Signup and view all the answers

Which of the following describes the role of inosine in tRNA?

<p>It enables pairing with A, C, and U (A)</p> Signup and view all the answers

How many different tRNA species are there for certain amino acids due to genetic code degeneracy?

<p>More than one tRNA species for some amino acids (C)</p> Signup and view all the answers

What does the term 'reading frame' refer to in the context of genetic translation?

<p>The specific codon sequence that determines amino acid order (C)</p> Signup and view all the answers

What is the term used for a sequence of three nucleotides in mRNA that codes for an amino acid?

<p>Codon (D)</p> Signup and view all the answers

How many different amino acids can be coded by a three-nucleotide (triplet) code?

<p>64 (A)</p> Signup and view all the answers

What mechanism allows for the degeneracy of the genetic code?

<p>Wobble pairing (D)</p> Signup and view all the answers

Which amino acid is represented by the codon 'UUU'?

<p>Phenylalanine (A)</p> Signup and view all the answers

What is the significance of stop codons in the genetic code?

<p>They terminate protein synthesis (C)</p> Signup and view all the answers

Which of the following scientists is NOT associated with the breaking of the genetic code?

<p>James Watson (A)</p> Signup and view all the answers

What is the result when the triplet code UUU is repeated in a polynucleotide?

<p>Produces a polypeptide containing phenylalanine (B)</p> Signup and view all the answers

How many codons do not code for any amino acids?

<p>3 (A)</p> Signup and view all the answers

What is the function of tRNA in translation?

<p>It brings amino acids to the ribosome (D)</p> Signup and view all the answers

What is the main outcome of the Nirenberg-Matthaei experiment?

<p>Identification of codon-amino acid pairs (B)</p> Signup and view all the answers

What are the three main stages of translation?

<p>Initiation, Elongation, Termination (C)</p> Signup and view all the answers

What is the primary role of mRNA in the context of protein synthesis?

<p>To code for a polypeptide chain (C)</p> Signup and view all the answers

Which statement correctly describes the ribosome's structure?

<p>It is an RNA/protein complex composed of two subunits. (B)</p> Signup and view all the answers

What role do cofactors play in the translation process?

<p>They provide the energy needed for translation. (A)</p> Signup and view all the answers

What is the significance of the large and small subunits of the ribosome?

<p>They participate in the binding of tRNA and mRNA. (A)</p> Signup and view all the answers

What plays a crucial role in identifying the site of initiation of protein synthesis in prokaryotes?

<p>Shine-Dalgarno sequence (C)</p> Signup and view all the answers

Which molecule is the formylated version of methionine used in prokaryotic translation initiation?

<p>fMet (D)</p> Signup and view all the answers

What is the process called in which amino acids are attached to tRNA?

<p>Amino acid activation (B)</p> Signup and view all the answers

Which component interacts with the 30S subunit during the initiation of translation in prokaryotes?

<p>Initiator tRNA (D)</p> Signup and view all the answers

In the amino acid activation process, what is the first product formed when an amino acid reacts with ATP?

<p>AA-AMP (C)</p> Signup and view all the answers

What completes the initiation complex in translation after the large subunit joins?

<p>mRNA binding (D)</p> Signup and view all the answers

What is the role of active IF2 during translation initiation?

<p>Facilitates tRNA binding (C)</p> Signup and view all the answers

In eukaryotes, what is the equivalent of the Shine-Dalgarno sequence for identifying the initiation site?

<p>Kozak sequence (B)</p> Signup and view all the answers

What is the primary role of IF3 during the initiation of translation?

<p>Stabilizing the free 30S ribosomal subunit (C)</p> Signup and view all the answers

In what way does EF-Tu function during the elongation phase of translation?

<p>It facilitates the entry of aminoacyl-tRNA into the ribosome (A)</p> Signup and view all the answers

What is the significance of the ternary complex during translation?

<p>It consists of aminoacyl-tRNA, EFTu, and GTP (D)</p> Signup and view all the answers

Which factor is responsible for terminating translation when a termination codon appears?

<p>RF-GTP (A)</p> Signup and view all the answers

What is the role of GTP in protein synthesis?

<p>It hydrolyzes to GDP to release energy (B)</p> Signup and view all the answers

Which statement about the P site during translation is correct?

<p>It is occupied by tRNA carrying the polypeptide chain (C)</p> Signup and view all the answers

What occurs during ribosome translocation in the elongation stage of translation?

<p>Empty tRNA is ejected from the A site (A)</p> Signup and view all the answers

What is unique about tRNA-Met during the initiation of translation?

<p>It is the only tRNA that can bind to the P site (B)</p> Signup and view all the answers

Which release factors play a role in the termination of translation?

<p>RF1, RF2, and RF3 (A)</p> Signup and view all the answers

What does the role of IF2 include during the initiation of translation?

<p>Tagging tRNA for entry into the ribosome (C)</p> Signup and view all the answers

Flashcards

Degenerate triplet code

The genetic code is a degenerate triplet code, which means that multiple codons can code for the same amino acid. For example, six different codons can code for the amino acid alanine. This degeneracy is primarily determined and maintained by interactions between amino acids and tRNA.

Wobble base pairing

The ability of the third base of a codon to pair with more than one base in the anticodon of tRNA. This allows for flexibility in codon recognition and contributes to the degeneracy of the genetic code.

Codon

A specific sequence of three consecutive nucleotides that codes for a particular amino acid. The genetic code is read in sets of three.

tRNA (transfer RNA)

A type of RNA that carries amino acids to the ribosome during protein synthesis. It has an anticodon sequence that pairs with the codon on mRNA, ensuring that the correct amino acid is added to the growing polypeptide chain.

Signup and view all the flashcards

Genetic code

The ability of an organism to translate its genetic information into proteins. This process involves the interactions between mRNA, tRNA, and ribosomes. The code is universal and shared by all living organisms.

Signup and view all the flashcards

tRNA

A molecule that carries a specific amino acid to the ribosome for protein synthesis, where it binds to the corresponding codon on mRNA.

Signup and view all the flashcards

Anticodon

The region on tRNA that recognizes and binds to a specific codon on mRNA.

Signup and view all the flashcards

Degeneracy of the genetic code

The genetic code is degenerate because multiple codons can code for the same amino acid.

Signup and view all the flashcards

Translation

The process of deciphering the genetic code and synthesizing proteins based on the mRNA sequence.

Signup and view all the flashcards

Open Reading Frame (ORF)

A continuous sequence of codons starting with a start codon (AUG) and ending with a stop codon.

Signup and view all the flashcards

Aminoacyl-tRNA synthetases

Enzymes that attach the correct amino acid to each tRNA molecule.

Signup and view all the flashcards

Wobble hypothesis

The ability of some tRNAs to recognize more than one codon, making the genetic code even more degenerate.

Signup and view all the flashcards

How the Genetic Code was Broken

The genetic code was deciphered using experiments that identified the specific amino acid encoded by each codon. One pioneering experiment involved using synthetic RNA molecules to create polypeptides.

Signup and view all the flashcards

What is a Codon?

A codon is a sequence of three nucleotides in mRNA that specifies a particular amino acid. These three-letter 'words' are the language of the genetic code.

Signup and view all the flashcards

Reading Frames

The sequence of codons in mRNA determines the order of amino acids in a protein, ultimately defining the protein's structure and function.

Signup and view all the flashcards

What does tRNA do?

tRNA (transfer RNA) acts as a molecular adaptor, recognizing specific codons on mRNA and bringing the corresponding amino acid to the ribosome for protein synthesis.

Signup and view all the flashcards

Synthesis of Aminoacyl tRNA

To participate in protein synthesis, tRNA needs to be attached to its specific amino acid. This process is called aminoacylation.

Signup and view all the flashcards

Stop Codons

A stop codon signals the end of protein synthesis. Three codons (UAA, UAG, UGA) do not code for any amino acid and act as 'stops' in the protein-building process.

Signup and view all the flashcards

The Genetic Code

Each codon in mRNA corresponds to a specific amino acid, allowing the cell to build a protein with the correct sequence. This code is universal across most organisms.

Signup and view all the flashcards

Ribosome

A complex molecular machine composed of two subunits, a large subunit and a small subunit, responsible for protein synthesis.

Signup and view all the flashcards

Small Ribosomal Subunit

The subunit of the ribosome where the mRNA binds and decoding takes place. It is responsible for recognizing the start codon and laying the foundation for protein synthesis.

Signup and view all the flashcards

Large Ribosomal Subunit

The subunit of the ribosome where the polypeptide chain is assembled. It contains the peptidyl transferase center, where peptide bonds are formed.

Signup and view all the flashcards

Svedberg Unit (S)

A measure of the sedimentation rate of particles in a centrifuge. It is used to describe the size and shape of molecules, including ribosomes.

Signup and view all the flashcards

Shine-Dalgarno Sequence (Prokaryotes)

A conserved sequence found in prokaryotic mRNA that interacts with the 16S rRNA of the 30S ribosomal subunit to identify the start site of protein synthesis. It helps position the ribosome for correct translation initiation.

Signup and view all the flashcards

Kozak Sequence (Eukaryotes)

A conserved sequence found in eukaryotic mRNA that interacts with the small ribosomal subunit (40S) to identify the start site of protein synthesis. Similar to the Shine-Dalgarno sequence in prokaryotes.

Signup and view all the flashcards

Initiator tRNA (tRNAi)

A type of tRNA that carries the formylmethionine amino acid to the ribosome during initiation of protein synthesis in prokaryotes.

Signup and view all the flashcards

Initiation Complex

A complex formed by the binding of initiation factors (IF1, IF2, IF3) and GTP to the 30S ribosomal subunit.

Signup and view all the flashcards

IF1

An initiation factor that blocks the A site on the 30S subunit, preventing premature binding of tRNA to the A site.

Signup and view all the flashcards

IF2

An initiation factor that tags the initiator tRNA (tRNAi-Met) with GTP and guides it to the ribosome, ensuring accurate initiation.

Signup and view all the flashcards

IF3

An initiation factor that prevents premature association of the 30S and 50S ribosomal subunits, stabilizes 30S, and checks for accurate tRNAi-Met binding.

Signup and view all the flashcards

Ternary Complex

A complex formed by the binding of an aminoacyl-tRNA, EF-Tu, and GTP.

Signup and view all the flashcards

EF-Tu

An elongation factor that mediates the entry of aminoacyl-tRNAs into the ribosome A site.

Signup and view all the flashcards

EF-G

An elongation factor that mediates the translocation of the ribosome along the mRNA, moving the peptidyl-tRNA from the A site to the P site.

Signup and view all the flashcards

A Site

A site on the ribosome where incoming aminoacyl-tRNAs bind during protein synthesis.

Signup and view all the flashcards

P Site

A site on the ribosome where the peptidyl-tRNA (tRNA carrying the growing polypeptide chain) is located.

Signup and view all the flashcards

Release Factor (RF)

A special protein factor that recognizes stop codons on mRNA and triggers the release of the polypeptide chain from the ribosome.

Signup and view all the flashcards

Study Notes

Molecular Biology - Module 7, Lecture 1: The Genetic Code

  • The lecture focuses on the genetic code, how it works, and how it was discovered.
  • Proteins are made of 20 amino acids, but messenger RNA (mRNA) only has 4 nucleotides.
  • A sequence of 3 nucleotides (a codon) specifies a particular amino acid.
  • There are 64 possible codons (4^3).
  • 61 of these codons specify amino acids; the remaining 3 are stop codons.
  • The genetic code is degenerate, meaning multiple codons can code for the same amino acid.
  • This degeneracy is facilitated by wobble base pairing in transfer RNA (tRNA).

Aims of the Lecture

  • Degeneracy of the genetic code.
  • How the genetic code was broken (Nirenberg-Matthaei experiment).
  • Reading frames.
  • The role of tRNA.
  • Aminoacyl-tRNA synthesis.
  • Wobble, a mechanism for degeneracy.

The Genetic Code

  • Proteins are made up of 20 amino acids.
  • mRNA only has 4 nucleotides.
  • A three-nucleotide sequence (codon) is required to code for each amino acid.
  • There are 16 possible combinations of 2 nucleotides.
  • There are 64 possible combinations of 3 nucleotides (codons).
  • 61 of those 64 codons specify amino acids.
  • The remaining three codons signal the end of the protein sequence (stop codons).

The Nirenberg-Matthaei Experiment

  • This experiment was crucial in deciphering the genetic code.
  • Researchers created synthetic mRNA with only one nucleotide (e.g., UUUUUUU).
  • The resulting polypeptide chain contained only one amino acid (e.g., phenylalanine), demonstrating a direct relationship between mRNA sequence and amino acid sequence. This was a critical step in breaking the genetic code.

Reading Frames

  • A reading frame is a sequence of codons that runs from a specific start codon to a specific stop codon.
  • Almost all protein chains begin with AUG (methionine).
  • There are three possible reading frames for any sequence of nucleotides.
  • Incorrect reading frame shifts will change the sequence, often leading to non-functional proteins. This is a significant aspect affecting protein function.

Transfer RNA (tRNA)

  • tRNA interacts with mRNA codons via an anticodon loop.
  • tRNA has an amino acid acceptor arm where the appropriate amino acid is attached ensuring the correct amino acid is added to the chain.
  • The anticodon loop of tRNA binds to the mRNA codon, thus facilitating accurate protein synthesis.
  • tRNA is essential for linking mRNA codons to their corresponding amino acids during protein synthesis.

Aminoacyl-tRNA Synthetases

  • Each tRNA is recognized by a specific aminoacyl-tRNA synthetase.
  • These enzymes attach the correct amino acid to its corresponding tRNA. These enzymes ensure accuracy in pairing amino acids and tRNA, essential for correct protein sequence.
  • The synthesis process is highly specific to ensure accuracy.
  • There are more tRNAs than amino acids since some tRNAs can recognize more than one codon.

Wobble Hypothesis

  • Wobble allows unconventional base pairing between the 3rd base of a codon and the 1st base of the anticodon. In other words, irregular base pairing.
  • This flexibility helps to accommodate the redundancy of the genetic code. This is how multiple codons can specify the same amino acid; explains why some tRNAs can recognize more than one codon.

Summary

  • A degenerate triplet genetic code translates nucleotide sequences into amino acid sequences.
  • Specificity in protein synthesis comes from amino acid-tRNA interactions.
  • Degeneracy means multiple codons for the same amino acid.
  • This redundancy is accomplished via wobble base pairing, a mechanism facilitating more than one tRNA to recognize more than one codon and accounting for the multiple codons for each amino acid.

Studying That Suits You

Use AI to generate personalized quizzes and flashcards to suit your learning preferences.

Quiz Team

Related Documents

More Like This

Use Quizgecko on...
Browser
Browser