Molecular Biology: Enzymes and Ribosomes
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Questions and Answers

What type of bond is formed between the amino group of an incoming amino acid and the carboxyl group of a polypeptide chain during protein synthesis?

  • Ionic bond
  • Disulfide bond
  • Hydrogen bond
  • Peptide bond (correct)

Which transport mechanism is used for the import of proteins into the nucleus?

  • Vesicular transport
  • Transmembrane transport
  • Gated transport (correct)
  • Active transport

What is the primary transport mechanism for exporting proteins from the nucleus?

  • Vesicular transport
  • Simple diffusion
  • Gated transport (correct)
  • Transmembrane transport

Which of the following mechanisms is used for returning proteins from the Golgi apparatus to the endoplasmic reticulum?

<p>Vesicular transport (A)</p> Signup and view all the answers

What characterizes lysosomes in terms of pH levels?

<p>Maintain a pH of about 2.0 to 2.5 (A)</p> Signup and view all the answers

Which transport mechanism is primarily involved in importing proteins into mitochondria?

<p>Transmembrane transport (A)</p> Signup and view all the answers

What feature do lysosomes maintain that aids in their function?

<p>Contain heavily glycosylated membrane proteins (D)</p> Signup and view all the answers

Which of the following statements about affected individuals and their mothers is correct?

<p>An affected woman almost always has an affected mother. (D)</p> Signup and view all the answers

Which of the following statements about the endoplasmic reticulum lumen is true?

<p>It is continuous with the perinuclear space (A)</p> Signup and view all the answers

What processes are involved in recombination?

<p>Crossing over and independent assortment. (C)</p> Signup and view all the answers

Which isotope was used to label the viral protein in the Hershey and Chase experiment?

<p>Sulfur-35. (C)</p> Signup and view all the answers

Which of the following contains repetitive DNA and heterochromatin?

<p>Centromere. (B)</p> Signup and view all the answers

Which of the following enzymes does not assist in the unwinding of DNA for replication?

<p>Primase. (B)</p> Signup and view all the answers

What is the RNA sequence transcribed from the DNA strand 5′ GTACCGTC 3′?

<p>5′ GACGGUAC 3′. (C)</p> Signup and view all the answers

Which statement correctly describes nonsense mutations?

<p>They convert a codon for an amino acid into a stop codon. (A)</p> Signup and view all the answers

At neutral pH, which structure better represents the amino acid serine?

<p>Neutral form with an amino group, a carboxyl group, and a carbon chain. (D)</p> Signup and view all the answers

What role does telomerase play in human cells?

<p>It has an RNA component that serves as a template. (D)</p> Signup and view all the answers

Which term describes the structure that appears during the cell cycle where cells commit to divide?

<p>Restriction point (B)</p> Signup and view all the answers

In which meiosis stage do sister chromatids separate?

<p>Meiosis II (B)</p> Signup and view all the answers

What is the expected direction of DNA strand synthesis at the replication fork?

<p>5′ to 3′ direction (B)</p> Signup and view all the answers

In a schematic representation of the cell cycle, which phase is typically represented by the letter 'M'?

<p>Mitosis (D)</p> Signup and view all the answers

Which of the following correctly identifies the function of the early endosome?

<p>Serves as a sorting compartment for internalized materials (D)</p> Signup and view all the answers

What occurs during the G1 phase of the cell cycle?

<p>Cell growth and metabolic activity (C)</p> Signup and view all the answers

In which cellular structure can the secretory vesicle be found?

<p>Cis Golgi network (B)</p> Signup and view all the answers

What type of enzyme is responsible for synthesizing RNA using a DNA template?

<p>RNA polymerase (D)</p> Signup and view all the answers

Which statement describes how amino acids are linked to tRNA by aminoacyl-tRNA synthetase?

<p>By forming a bond between the carboxyl group of the amino acid and the 3' or 2' hydroxyl group of the tRNA. (D)</p> Signup and view all the answers

In what direction is the mRNA read during translation?

<p>5' to 3'; N- to C-terminus (D)</p> Signup and view all the answers

What happens during peptidyl transfer at the ribosome?

<p>The carboxyl end of the polypeptide is released from the P-site tRNA and joined to the free amino group of the A-site tRNA. (C)</p> Signup and view all the answers

What is the primary function of RNA polymerase in the cell?

<p>To synthesize RNA (B)</p> Signup and view all the answers

What is the term for a form of a gene that has a slightly different sequence but encodes the same type of RNA or protein?

<p>allele (A)</p> Signup and view all the answers

What serves as the attachment point on the chromosome for spindle microtubules during cell division?

<p>centromere (B)</p> Signup and view all the answers

Which of the following options accurately describes the connection between amino acids and tRNA?

<p>Amino acids are linked to tRNA by an ester bond. (A)</p> Signup and view all the answers

What role do the A and P sites serve during translation?

<p>They facilitate the formation of peptide bonds. (D)</p> Signup and view all the answers

How many sets of chromosomes do diploid cells have?

<p>two sets (B)</p> Signup and view all the answers

During which phase of cell division do microtubules attach to the kinetochores of the chromosomes?

<p>prometaphase (B)</p> Signup and view all the answers

Which statement correctly describes the overall directionality of peptide chain synthesis?

<p>From N-terminus to C-terminus. (B)</p> Signup and view all the answers

What is the expected proportion of offspring with green seeds from a yellow offspring crossed with a green plant, assuming yellow seeds are dominant?

<p>50% (D)</p> Signup and view all the answers

Which chromosome constitution will never result in a viable human baby?

<p>YY (D)</p> Signup and view all the answers

What possible blood types can result from a couple with blood types AB and A?

<p>A, B, and AB only (C)</p> Signup and view all the answers

Which statement is likely true regarding a child with an autosomal recessive trait when both parents are phenotypically normal?

<p>The parents are both heterozygous for the trait. (C)</p> Signup and view all the answers

Flashcards

Peptide bond formation

In protein synthesis, the amino end (N-terminus) of an amino acid from the A-site tRNA is attached to the free carboxyl group (C-terminus) of the growing polypeptide chain linked to the P-site tRNA.

Gated transport

A type of protein transport that occurs through protein channels or pores in cell membranes, allowing the passage of molecules across the membrane without directly contacting the lipid bilayer.

Transmembrane transport

A type of protein transport that occurs through transmembrane proteins embedded in the cell membrane, directly interacting with the lipid bilayer.

Vesicular transport

A type of protein transport that involves the movement of molecules within membrane-bound vesicles, which bud off from one organelle and fuse with another.

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Nuclear import

The movement of proteins from the cytoplasm into the nucleus.

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Nuclear export

The movement of proteins from the nucleus into the cytoplasm.

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Mitochondrial import

The process by which proteins are transported from the cytoplasm into the mitochondria.

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Lysosome pH

Lysosomes are acidic organelles that play a crucial role in cellular digestion. They maintain a low pH (around 2.0 to 2.5), which is essential for the activity of their hydrolytic enzymes.

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What is an allele?

Different versions of the same gene that code for the same type of RNA or protein but have slightly different sequences.

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What is the centromere?

The point on a chromosome where spindle microtubules attach during cell division.

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What are diploid cells?

Cells that have two sets of chromosomes, one set inherited from each parent.

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What happens during prometaphase?

The stage in mitosis where microtubules attach to the kinetochores, which are structures on chromosomes.

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What is the expected proportion of green seed plants if a yellow offspring is crossed with a green plant?

In a cross between a pure-breeding yellow plant and a pure-breeding green plant, 50% of the offspring will have green seeds.

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Which chromosome constitution would never lead to a viable human baby?

A chromosome constitution that would never lead to a viable human baby is YY. Humans need at least one X chromosome for survival.

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What blood types are possible among the offspring of a couple with blood types AB and A?

The possible blood types among the offspring of a couple with blood types AB and A are A, B, and AB.

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Why would two phenotypically normal parents have a child with an autosomal recessive trait?

Two phenotypically normal parents having a child with an autosomal recessive trait indicates that both parents are heterozygous for the trait. This means they each carry one copy of the recessive allele.

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What enzyme is depicted in the schematic?

DNA polymerase is an enzyme that synthesizes DNA from a DNA template. RNA polymerase synthesizes RNA from a DNA template. The schematic shows the synthesis of RNA (messenger RNA) using a DNA template.

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Where does aminoacyl-tRNA synthetase attach the amino acid to tRNA?

The amino group of the amino acid is NOT modified during the attachment to tRNA by aminoacyl-tRNA synthetase. Instead, the carboxyl group links to the 3' or 2' hydroxyl group of the tRNA.

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How are the mRNA and polypeptide chain synthesized?

The mRNA is read from the 5' end to the 3' end. The polypeptide chain is synthesized from the amino (N) terminus to the carboxyl (C) terminus.

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What happens during peptidyl transfer?

The peptidyl transferase activity of the ribosome transfers the polypeptide chain from the P-site tRNA to the amino acid attached to the A-site tRNA.

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What happens when a ribosome has tRNAs in both the A and P sites?

During translation, the carboxyl end of the polypeptide chain is joined to the free amino group of the amino acid linked to the A-site tRNA, lengthening the polypeptide chain.

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Why are aminoacyl-tRNA synthetases important for translation?

Aminoacyl-tRNA synthetases are specific for particular amino acids and their corresponding tRNAs. They charge the tRNA with the correct amino acid.

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Why is reverse transcriptase NOT the enzyme depicted in the schematic?

Reverse transcriptase is an enzyme that synthesizes DNA from an RNA template. The schematic shows RNA synthesis from DNA, not the other way around.

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Why is topoisomerase NOT the enzyme depicted in the schematic?

The schematic shows RNA polymerase synthesizing RNA from a DNA template. Topoisomerase is not directly involved in RNA synthesis.

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An affected woman almost always has an affected mother.

A condition where an affected woman always inherits the disorder from her mother. This suggests a maternal inheritance pattern, often associated with mitochondrial inheritance or X-linked recessive inheritance.

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What is recombination?

Recombination refers to the exchange of genetic material between homologous chromosomes during meiosis. This process leads to new combinations of alleles on chromosomes, increasing genetic diversity.

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Hersey and Chase Experiment

Hershey and Chase used radioactive isotopes to label the protein and DNA of bacteriophages, then infected bacteria. They discovered that the radioactive DNA entered the bacteria, while the radioactive protein remained on the outside, proving that DNA was the heritable genetic material.

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Repetitive DNA and Heterochromatin

Telomeres and centromeres are specialized regions of chromosomes characterized by repetitive DNA sequences and heterochromatin. These regions are essential for chromosome stability and proper cell division.

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Enzymes involved in DNA unwinding: Which one is NOT involved?

Helicase, single-stranded binding proteins, and topoisomerase all work together to unwind and separate the DNA strands during replication, but primase lays down RNA primers to initiate DNA synthesis.

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DNA to RNA Transcription

This is the process of converting a DNA sequence into a RNA sequence. In RNA, Thymine (T) is replaced with Uracil (U). The sequence of the complementary RNA strand is determined by base pairing rules.

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Nonsense Mutation

Nonsense mutations alter a codon within a gene, changing it into a stop codon. This premature termination of protein synthesis results in a truncated, non-functional protein.

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Structure of Serine Amino Acid

At neutral pH, serine's amino and carboxyl groups ionize, while its unique hydroxyl group remains unchanged.

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What is the telomerase enzyme?

A specialized enzyme found in human cells that helps maintain telomeres, the protective caps at the ends of chromosomes. It contains an RNA component acting as a template for DNA synthesis.

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What is the difference between the leading and lagging strands during DNA replication?

The leading strand is synthesized continuously 5' to 3' towards the replication fork, while the lagging strand is synthesized discontinuously in short fragments called Okazaki fragments, also in the 5' to 3' direction, but away from the fork.

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What is the restriction point in the cell cycle?

The restriction point is a critical checkpoint in the G1 phase of the cell cycle where the cell decides whether to commit to cell division or not. It assesses the availability of nutrients and growth factors.

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Which stage of meiosis is most similar to mitosis?

Meiosis II is the second division in meiosis, where sister chromatids separate, much like mitosis. It results in four haploid daughter cells, each with half the number of chromosomes as the parent cell.

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What is the role of the early endosome in the endocytic pathway?

The early endosome is a small, membrane-bound vesicle that forms when materials are taken into the cell via endocytosis. It sorts the cargo, preparing it for further processing.

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What is the purpose of the late endosome?

The late endosome is a larger vesicle that matures from an early endosome. Its acidic environment activates enzymes and promotes the degradation of unwanted molecules.

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What is the role of secretory vesicles?

Secretory vesicles are small, membrane-bound sacs that bud off from the trans Golgi network. These vesicles carry proteins and other molecules to the cell surface for secretion outside the cell.

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What is the function of the cis Golgi network?

The cis Golgi network (CGN) is a specialized region of the Golgi apparatus where newly synthesized proteins arrive from the endoplasmic reticulum (ER). It sorts and modifies proteins before they move further through the Golgi.

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Study Notes

Enzyme Depiction

  • The enzyme depicted in the schematic drawing is RNA polymerase
  • This enzyme synthesizes RNA using one of the DNA strands as a template

Aminoacyl-tRNA Synthetase

  • Aminoacyl-tRNA synthetase activates a specific amino acid by linking it to its corresponding tRNA
  • The linkage occurs between the carboxyl group of the amino acid and the 3' or 2' hydroxyl group of the tRNA.

Ribosome Function

  • On the ribosome, mRNA is read from 5' to 3', and the polypeptide chain is synthesized from the N-terminus to the C-terminus.
  • Ribosomes translate mRNA into proteins during translation.
  • During translation elongation, ribosomes translocate along the mRNA from the 5' end to the 3' end in three-nucleotide sets.

Elongating Ribosome

  • An elongating ribosome binds to appropriate tRNAs in both the A and P sites.
  • The carboxyl end of a growing polypeptide chain is released from the P-site tRNA, then joined to the free amino group of the amino acid linked to the A-site tRNA.

Protein Transport Processes

  • Import into the nucleus and the other cellular pathways use different transport processes.
  • G - Gated transport
  • T - Transmembrane transport
  • V - Vesicular transport

Lysosomes

  • Lysosomes are the principal site of cellular digestion.
  • They maintain an acidic pH of about 2.0 to 2.5.
  • They contain F-type ATPases that pump protons into the organelles,
  • They are not homogeneous in size and shape.

Telomerase Enzyme

  • Telomerase in human cells has an RNA component.
  • It extends the telomeres using its RNA polymerase activity.
  • Telomerase's RNA polymerase activity does not use a DNA template to polymerize the telomeric DNA sequences.

Replication Fork

  • The strand labeled A in a replication fork diagram is known as the lagging strand.
  • This strand is extended from 5' to 3', but the replication fork moves in the opposite direction.
  • This produces discontinuously polymerized strands.

Restriction Point

  • The restriction point in a mammalian cell cycle is located during the G1 phase.

Meiosis and Mitosis

  • Meiosis II is more similar to mitosis than meiosis I.
  • Sister chromatids separate during meiosis II, not meiosis I.

Gene Form

  • The form of a gene that slightly differs from other forms yet encodes a similar RNA or protein is called an allele.

Chromosome Attachment

  • The centromere is the attachment point on the chromosome for spindle microtubules.

Diploid Cells

  • Diploid cells normally contain two sets of chromosomes.

Prometaphase

  • During prometaphase, microtubules attach to the kinetochores of chromosomes.

Mendel's Peas

  • In Mendel's peas, yellow seeds are dominant over green seeds.
  • A cross between a pure-breeding yellow seed plant and a pure-breeding green seed plant will result in all offspring with yellow seeds.
  • If a yellow seed offspring is crossed with a green seed plant, the expected proportion of plants with green seeds in the next generation will be 50%.

Human Chromosome Constitutions

  • A viable human male or female requires a complete set of chromosomes.
  • The chromosome constitution of a YY human cannot lead to a viable human baby.

Blood Types

  • Blood types A and B are codominant to each other.
  • Blood type O is recessive to both A and B.
  • The possible blood types of offspring from an AB type parent and an A type parent are A, B, and AB

X-Linked Recessive Traits

  • An affected man often has phenotypically normal parents
  • An affected man usually has a mother who carries the recessive allele
  • All the sons of a woman with an affected X-linked recessive trait will not be affected

Recombination

  • Recombination occurs through crossing over and independent assortment.

Hershey-Chase Experiment

  • In the Hershey-Chase experiment, the isotope 35S was used to label viral proteins.

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This quiz focuses on the functions of crucial enzymes in molecular biology, including RNA polymerase and aminoacyl-tRNA synthetase. It also covers the role of ribosomes in protein synthesis and the process of translation. Test your understanding of these vital cellular processes!

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