Module 9 - Effects of Mutations I

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Questions and Answers

What type of mutation is responsible for the commonest mutation in cystic fibrosis known as ΔF508?

  • Missense mutation
  • Nonsense mutation
  • Frameshift mutation
  • In-frame deletion (correct)

What is the effect of the G542X mutation in cystic fibrosis patients?

  • The CFTR protein is not produced due to a stop codon (correct)
  • The CFTR protein is produced but is non-functional
  • The CFTR protein is made normally
  • The CFTR protein is produced at a reduced rate

What type of mutation is G551D in cystic fibrosis, and what does it specifically do?

  • Silent mutation that has no effect on CFTR protein
  • Missense mutation that alters CFTR functional efficiency (correct)
  • Nonsense mutation that prevents CFTR protein synthesis
  • Frameshift mutation that disrupts the entire protein structure

In the context of cystic fibrosis, what is the consequence of a recessive disorder caused by mutations in both alleles of a gene?

<p>Symptoms occur only in individuals with two mutated alleles (C)</p> Signup and view all the answers

Which of the following statements about CFTR protein function is true regarding cystic fibrosis mutations?

<p>Mutations can lead to CFTR protein reaching the cell surface but being dysfunctional (A)</p> Signup and view all the answers

When discussing carriers of cystic fibrosis, what best describes their genetic makeup?

<p>They have one normal allele and one mutated allele (A)</p> Signup and view all the answers

What is the primary role of the CFTR protein in cells?

<p>Transporting chloride ions across cell membranes (D)</p> Signup and view all the answers

Orkambi, a treatment for cystic fibrosis, consists of which two components?

<p>Ivacaftor and Lumacaftor (D)</p> Signup and view all the answers

How does a deletion of nucleotides affect the function of a CFTR protein?

<p>It prevents the protein from reaching the cell surface (B)</p> Signup and view all the answers

What is the total number of amino acids in the CFTR protein, as mentioned in the content?

<p>1480 (C)</p> Signup and view all the answers

What type of mutation is characterized by the replacement of one base pair with another?

<p>Point mutation (D)</p> Signup and view all the answers

Which type of mutation does not alter the amino acid sequence?

<p>Synonymous mutation (C)</p> Signup and view all the answers

What occurs during a nonsense mutation?

<p>A codon for an amino acid is changed to a stop codon (B)</p> Signup and view all the answers

What is the result of a frameshift mutation?

<p>The amino acid sequence shifts due to changes in the reading frame (B)</p> Signup and view all the answers

Which mutation involves the insertion of base pairs?

<p>Insertion mutation (B)</p> Signup and view all the answers

In which type of mutation does a stop codon change to a codon for an amino acid?

<p>Readthrough mutation (B)</p> Signup and view all the answers

What are the effects of point mutations?

<p>A mixture of nonsense, synonymous, and missense effects (D)</p> Signup and view all the answers

What is the role of suppressive mutations?

<p>They restore the correct amino acid sequence even if the nucleotide sequence is altered (A)</p> Signup and view all the answers

Which statement best describes insertion mutations?

<p>They involve adding one or more base pairs to a gene (B)</p> Signup and view all the answers

What is a common result of deletion mutations?

<p>Alteration of the reading frame and potentially nonfunctional proteins (B)</p> Signup and view all the answers

Which of the following does not characterize transversion mutations?

<p>Purine to purine transition (A)</p> Signup and view all the answers

What term describes mutations like those found in cystic fibrosis?

<p>Monogenic disorders (D)</p> Signup and view all the answers

What is one major reason mutations are significant in biological evolution?

<p>They introduce new genetic variations into populations (D)</p> Signup and view all the answers

What is the significance of the G171V mutation in LDL-Receptor–Related Protein 5?

<p>It correlates with decreased incidence of bone fractures. (A)</p> Signup and view all the answers

Which mutation is associated with individuals requiring more anesthesia?

<p>Melanocortin 1 receptor mutation (A)</p> Signup and view all the answers

How does the DEC2-P384R mutation affect sleep patterns?

<p>It increases the expression of Orexin. (C)</p> Signup and view all the answers

What is the primary outcome associated with the apolipoprotein A-I 'Milano' variant?

<p>Reduction in cardiovascular disease risk. (A)</p> Signup and view all the answers

Which of the following statements about the MC1R mutation is correct?

<p>It can cause red hair and fair skin. (D)</p> Signup and view all the answers

What does the LRP5 gene primarily regulate?

<p>Bone density through Wnt signaling. (C)</p> Signup and view all the answers

Which benefit is least likely associated with the Natural Short Sleep mutation?

<p>Lowered anxiety levels. (A)</p> Signup and view all the answers

How does the mutation in the apoAI contribute to cardiovascular health?

<p>By reducing atherosclerotic lesions. (A)</p> Signup and view all the answers

Which feature characterizes human natural short sleepers?

<p>They show no harmful effects despite shorter sleep. (A)</p> Signup and view all the answers

What is the main function of the orexin peptide in sleep regulation?

<p>To encourage wakefulness. (B)</p> Signup and view all the answers

What is the primary distinction between genotype and phenotype in an organism?

<p>Genotype describes the combined alleles of an organism, while phenotype refers to observable biological characteristics. (C)</p> Signup and view all the answers

How does haploinsufficiency affect an organism?

<p>One defective gene copy can lead to a disease due to insufficient protein production. (B)</p> Signup and view all the answers

What type of genetic disorder exemplifies the effects of large deletion mutations?

<p>Deletion of approximately 500 kb from the X chromosome. (A)</p> Signup and view all the answers

What is the consequence of having an unusual number of chromosomes in an organism?

<p>Monosomy and trisomy can lead to various diseases. (D)</p> Signup and view all the answers

Which statement describes chromosome translocations?

<p>They involve the exchange of segments between different chromosomes. (B)</p> Signup and view all the answers

In inherited diseases caused by mutant alleles, what role do carriers play?

<p>Carriers do not express the disease but can pass the allele to offspring. (D)</p> Signup and view all the answers

What best describes monogenic disorders?

<p>Inherited diseases caused by defects in single genes. (D)</p> Signup and view all the answers

Which example best illustrates a condition caused by haploinsufficiency?

<p>Mandibulofacial Dysostosis Guion Almeida type due to EFTUD2 malfunction. (C)</p> Signup and view all the answers

What is the result of the Philadelphia chromosome's formation?

<p>Uncontrolled cell division leading to leukemia. (D)</p> Signup and view all the answers

Which mutation type can lead to bone marrow failure and increased leukemia risk?

<p>Monosomy, specifically of chromosome 7. (B)</p> Signup and view all the answers

Which of the following exemplifies the role of mutations in evolution?

<p>Some mutations can enhance organismal fitness. (C)</p> Signup and view all the answers

What do mutations in diploid organisms typically imply about gene presence?

<p>Each gene is represented by two copies in diploid organisms. (D)</p> Signup and view all the answers

What is the function of the CFTR gene in healthy individuals?

<p>It regulates the production of mucus in various organs. (A)</p> Signup and view all the answers

Which genetic change is characterized by the presence of three copies of chromosome 21?

<p>Trisomy. (D)</p> Signup and view all the answers

Flashcards

Point Mutation

A change in a DNA sequence where one base pair is replaced with another.

Transition Mutation

A type of point mutation where a purine base (adenine or guanine) is replaced with another purine base, or a pyrimidine base (thymine or cytosine) is replaced with another pyrimidine base.

Transversion Mutation

A type of point mutation where a purine base (adenine or guanine) is replaced with a pyrimidine base (thymine or cytosine), or vice versa.

Insertion Mutation

A mutation where one or more base pairs are added to the DNA sequence.

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Deletion Mutation

A mutation where one or more base pairs are removed from the DNA sequence.

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Inversion Mutation

A mutation where a sequence of DNA is flipped and reinserted in the opposite orientation.

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Synonymous Mutation

A point mutation that does not change the amino acid sequence encoded by the gene, due to redundancy in the genetic code.

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Non-synonymous Mutation

A point mutation that changes the amino acid sequence encoded by the gene.

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Nonsense Mutation

A non-synonymous mutation that changes a codon for an amino acid into a stop codon, resulting in a shortened protein.

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Readthrough Mutation

A mutation that changes a stop codon into a codon for an amino acid, resulting in an extended protein.

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Frameshift Mutation

A type of mutation caused by insertions or deletions that shift the reading frame of the genetic code, changing all codons downstream from the mutation.

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Suppressive Mutation

A second mutation that reverses the effect of a previous mutation, restoring the correct amino acid sequence.

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Monogenic Disorders

Inherited disorders caused by defects in single genes.

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Cystic Fibrosis

A genetic disorder caused by a mutation in the CFTR gene, which is responsible for proper salt and water balance in cells.

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CFTR Protein

The protein encoded by the CFTR gene, responsible for regulating chloride transport across cell membranes.

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CFTR Mutation

A change in the DNA sequence that affects the function of the CFTR gene.

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F508 or F508del Mutation

A mutation where a glycine at position 508 is replaced with a stop codon, prematurely terminating protein synthesis.

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Missense Mutation

A type of point mutation where the substitution results in a different amino acid being coded for.

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Orkambi

A type of treatment for Cystic Fibrosis that utilizes two medications, Ivacaftor and Lumacaftor, to address the underlying CFTR dysfunction.

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Orkambi

A combination therapy for Cystic Fibrosis that utilizes two medications, Ivacaftor and Lumacaftor, to address the underlying CFTR dysfunction.

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CFTR Mutation

A change in the DNA sequence that affects the function of the CFTR gene.

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Phenotype

The biological characteristics of an organism, determined by its genotype and influenced by environmental factors.

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Genotype

The genetic makeup of an organism, represented by the specific alleles it possesses.

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Mutation

A change in the DNA sequence of an organism.

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Effects of Mutations

Mutations can either be detrimental, beneficial, or have no impact on an organism's survival or fitness.

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Diploid

Having two copies of each chromosome, one inherited from each parent.

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Alleles

The different versions of a gene that arise due to mutations.

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Haploinsufficiency

A situation where a mutation in a single gene copy is enough to cause a disease.

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Large Deletion Mutation

A major deletion of a large chunk of DNA from a chromosome.

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Trisomy

A condition where an individual has an extra copy of a chromosome.

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Monosomy

A condition characterized by the absence of one chromosome in a pair.

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Chromosome Translocation

A condition where a part of one chromosome is transferred to another chromosome.

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Philadelphia Chromosome

An abnormal chromosome found in some types of leukemia, resulting from a translocation between chromosomes 9 and 22.

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ApoAI "Milano" variant

A variant of the Apolipoprotein A-I gene, specifically a missense mutation at position 173 (R173C), linked to a reduced risk of cardiovascular disease in carriers.

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LRP5 Mutation

A gene associated with bone density, specifically a missense mutation at position 171 (G171V) in LRP5 is associated with higher bone density and reduced risk of fractures.

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Red Hair and Pain Sensitivity

A mutation in the melanocortin 1 receptor (MC1R) gene that disrupts pigmentation, resulting in red hair and fair skin. It's also linked to increased sensitivity to pain, especially with inhalational anesthesia.

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Natural Short Sleep

Individuals who naturally require less sleep than the average person, with no apparent negative health consequences from their shortened sleep duration.

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DEC2-P384R Mutation

A missense mutation in DEC2, specifically DEC2-P384R, associated with Natural Short Sleep. The mutation causes increased expression of orexin, a wake-promoting peptide.

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Limone sul Garda Family

A family originating from Limone sul Garda, northern Italy, that carries a mutation in the Apolipoprotein A-I gene, resulting in lower cardiovascular disease risk.

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Connecticut Kindred

A group of individuals from Connecticut carrying a mutation in the LRP5 gene, leading to increased bone density and lower fracture risk.

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Wnt Signaling

A pathway crucial for bone development and controlled by the LRP5 gene.

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Orexin

A peptide promoting wakefulness, its expression is often increased in individuals with natural short sleep due to a mutation in DEC2.

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Study Notes

Module 9 - Lecture 1: Effects of Mutations I

  • Topic: Effects of mutations on the information content of genes
  • Types of mutations: Point, insertion, deletion, frameshift, readthrough, and other mutations
  • Relevance: Mutations are crucial for evolution and organism diversity, but some cause disease
  • Illustrative example: Mutations in Cystic Fibrosis demonstrate the impact of mutations on gene product synthesis/activity
  • Point mutation: One base pair is replaced with another
    • Transition: Purine to purine (A to G) or pyrimidine to pyrimidine (T to C)
    • Transversion: Purine to pyrimidine (A or G to T or C) or vice versa
  • Insertion mutation: One or more base pairs are inserted into the DNA sequence
  • Deletion mutation: One or more base pairs are deleted from the DNA sequence
  • Inversion mutation: Two or more base pairs are excised and reinserted in the opposite orientation
  • Effects of point mutations on genes:
    • Synonymous mutation (silent mutation): No effect on the amino acid sequence, although it can occur in intergenic regions
    • Non-synonymous mutation (missense mutation): Changes the amino acid sequence
    • Nonsense mutation: Changes a codon for an amino acid into a stop codon
    • Readthrough mutation: Changes a stop codon to a codon for an amino acid

Monogenic Disorders

  • Definition: Inherited diseases caused by defects in individual genes
  • Prevalence: About 6000 known monogenic disorders; estimated 10,000 in total
  • Common UK example: Cystic Fibrosis

Effects of Mutations on the Cystic Fibrosis Gene

  • CFTR gene: Codes for the cystic fibrosis transmembrane regulator protein (CFTR)
    • Function: A chloride channel on the cell surface, crucial for regulating salt and water balance within and outside the cells
  • F508del mutation: The most common mutation in the UK (68% of cases)
    • Mechanism: Deletion of three nucleotides, removing the codon for phenylalanine (508th amino acid of the polypeptide)
    • Outcome: The CFTR protein is misfolded and cannot reach the cell surface, impaired function
  • G542X mutation: Second most common
    • Mechanism: A nonsense mutation, changing glycine (G) to a stop codon (X) at position 542
    • Outcome: Premature termination of the CFTR protein synthesis, leading to a non-functional protein
  • G551D mutation: Third most common
    • Mechanism: A missense mutation, changing glycine (G) to aspartic acid (D) at position 551
    • Outcome: A less severe impact on the CFTR protein function, but reduced function (4% of normal)

Treatment for Cystic Fibrosis

  • Orkambi (combination of Ivacaftor and Lumacaftor): Effective in people with two copies of the F508del mutation
    • Ivacaftor (CFTR Potentiator): Increases the probability of the CFTR channel opening
    • Lumacaftor (CFTR Corrector): Improves the processing and trafficking of CFTR to the cell surface

Resources

  • Reading material: Brown (specific chapters and pages), Alberts (specific chapters and pages)
  • Other resources: PDF files with Objectives, Terms, Questions and Answers, Further Study Module on Mutations and Human Diseases available on Blackboard

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