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Questions and Answers
What role does the gut microbiota play in the immune response?
What role does the gut microbiota play in the immune response?
What happens to colonization resistance when antibiotics are used?
What happens to colonization resistance when antibiotics are used?
What is a potential consequence of the normal flora being displaced?
What is a potential consequence of the normal flora being displaced?
Which of the following statements is true regarding the effects of normal flora?
Which of the following statements is true regarding the effects of normal flora?
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In which scenario can normal flora become pathogenic?
In which scenario can normal flora become pathogenic?
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Which part of the eye is protected from bacterial colonization by tears, mucus, and oil?
Which part of the eye is protected from bacterial colonization by tears, mucus, and oil?
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What type of flora is typically found in the outer ear and auditory canal?
What type of flora is typically found in the outer ear and auditory canal?
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Which microorganism can cause acute bacterial pneumonia in immunocompromised individuals?
Which microorganism can cause acute bacterial pneumonia in immunocompromised individuals?
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What primarily causes the absence of bacteria in the stomach?
What primarily causes the absence of bacteria in the stomach?
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Which part of the gastrointestinal tract has the highest concentration of bacteria?
Which part of the gastrointestinal tract has the highest concentration of bacteria?
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What is the status of the urinary tract organs like kidneys, ureters, and urinary bladder?
What is the status of the urinary tract organs like kidneys, ureters, and urinary bladder?
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What type of bacteria predominantly inhabits the vagina?
What type of bacteria predominantly inhabits the vagina?
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What happens to normal flora in the lower gastrointestinal tract if they relocate?
What happens to normal flora in the lower gastrointestinal tract if they relocate?
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What are microbiota primarily composed of?
What are microbiota primarily composed of?
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What is true about the composition of gut microbiota?
What is true about the composition of gut microbiota?
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What happens when the number of resident microbiota is significantly reduced?
What happens when the number of resident microbiota is significantly reduced?
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Which of the following best defines normal microbiota?
Which of the following best defines normal microbiota?
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Which of the following factors does NOT affect the composition of a person's microbiota?
Which of the following factors does NOT affect the composition of a person's microbiota?
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What is the estimated weight of the gut microbiota in a healthy human?
What is the estimated weight of the gut microbiota in a healthy human?
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At what stage in life does a human's normal microbiota begin to establish?
At what stage in life does a human's normal microbiota begin to establish?
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What is the role of normal body flora in the host?
What is the role of normal body flora in the host?
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What is the main reason transient microbiota are temporary inhabitants of the human body?
What is the main reason transient microbiota are temporary inhabitants of the human body?
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Which of the following sites is NOT known for harboring resident microbiota?
Which of the following sites is NOT known for harboring resident microbiota?
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What type of bacteria primarily constitutes the skin microbiota?
What type of bacteria primarily constitutes the skin microbiota?
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Which factor contributes to the temporary nature of transient microbiota on the skin?
Which factor contributes to the temporary nature of transient microbiota on the skin?
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What is the role of Cutibacterium acnes in the skin?
What is the role of Cutibacterium acnes in the skin?
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Which of the following microorganisms is most abundant on the skin?
Which of the following microorganisms is most abundant on the skin?
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Which microbial species is primarily found in the conjunctiva of the eye?
Which microbial species is primarily found in the conjunctiva of the eye?
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How do resident skin microbiota contribute to preventing infections?
How do resident skin microbiota contribute to preventing infections?
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What role do beneficial bacteria in the vagina primarily serve?
What role do beneficial bacteria in the vagina primarily serve?
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Which of the following substances do microbiota in the gut provide that is essential for digestion?
Which of the following substances do microbiota in the gut provide that is essential for digestion?
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How do microbiota stimulate immune system development in newborns?
How do microbiota stimulate immune system development in newborns?
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Which of the following genera of bacteria is found in greater numbers in patients with inflammatory bowel diseases?
Which of the following genera of bacteria is found in greater numbers in patients with inflammatory bowel diseases?
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What effect does the transplantation of fecal bacteria from obese mice to nonobese mice have?
What effect does the transplantation of fecal bacteria from obese mice to nonobese mice have?
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What is a major function of normal flora in protecting the body?
What is a major function of normal flora in protecting the body?
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In healthy individuals, which bacteria are typically more prevalent in the stool compared to those with certain diseases?
In healthy individuals, which bacteria are typically more prevalent in the stool compared to those with certain diseases?
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What is one significant role of microbiota in relation to infectious diseases?
What is one significant role of microbiota in relation to infectious diseases?
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Flashcards
What are microbiota?
What are microbiota?
Microorganisms, mainly bacteria, that normally live in and on the human body.
What are permanent flora?
What are permanent flora?
Microbiota that are always present in the body, even in healthy individuals.
What are temporary flora?
What are temporary flora?
Microorganisms that are temporarily present in the body, often due to environmental exposure or dietary changes.
How do microbiota vary between individuals?
How do microbiota vary between individuals?
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What is the importance of microbiota in host defense?
What is the importance of microbiota in host defense?
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Why is the gut microbiome important?
Why is the gut microbiome important?
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How can microbiota contribute to disease?
How can microbiota contribute to disease?
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How is microbiota acquired during life?
How is microbiota acquired during life?
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Transient Microbiota
Transient Microbiota
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Why are transient microbiota temporary?
Why are transient microbiota temporary?
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Resident Microbiota
Resident Microbiota
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Where are resident microbiota found?
Where are resident microbiota found?
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Specific locations of resident microbiota
Specific locations of resident microbiota
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Bacteria on the skin
Bacteria on the skin
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Potential dangers of skin microbiota
Potential dangers of skin microbiota
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Microbiota in the eye
Microbiota in the eye
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What protects the conjunctiva from bacterial colonization?
What protects the conjunctiva from bacterial colonization?
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Why are the middle and inner ears usually sterile, but the outer ear and auditory canal are not?
Why are the middle and inner ears usually sterile, but the outer ear and auditory canal are not?
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What types of microorganisms live in the upper respiratory tract?
What types of microorganisms live in the upper respiratory tract?
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Which bacterium is commonly found in the nasopharynx and can cause pneumonia in certain populations?
Which bacterium is commonly found in the nasopharynx and can cause pneumonia in certain populations?
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Why is the lower respiratory tract generally sterile?
Why is the lower respiratory tract generally sterile?
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What are the most common bacteria found in the oral cavity?
What are the most common bacteria found in the oral cavity?
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What bacteria is commonly found in teeth and gingiva and can cause dental problems?
What bacteria is commonly found in teeth and gingiva and can cause dental problems?
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Why are there fewer bacteria in the stomach and upper parts of the small intestine compared to the lower small intestine?
Why are there fewer bacteria in the stomach and upper parts of the small intestine compared to the lower small intestine?
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Colonization Resistance
Colonization Resistance
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Immune System Modulation
Immune System Modulation
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T Cell Modulation
T Cell Modulation
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Pseudomembranous Colitis
Pseudomembranous Colitis
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Fecal Microbiota Transplantation
Fecal Microbiota Transplantation
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Why is the vaginal pH acidic?
Why is the vaginal pH acidic?
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What is the purpose of normal flora in the vagina?
What is the purpose of normal flora in the vagina?
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What are sterile body zones?
What are sterile body zones?
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What is the role of microbiota in host defense?
What is the role of microbiota in host defense?
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How do microbiota help newborns?
How do microbiota help newborns?
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What is the role of gut microbiota?
What is the role of gut microbiota?
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What is the significance of the gut microbiome?
What is the significance of the gut microbiome?
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How can microbiota be linked to disease?
How can microbiota be linked to disease?
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Study Notes
Microbiota
- Microbiota are microorganisms, primarily bacteria, fungi, protozoa, and viruses, commonly inhabiting the human body.
- They are essential for normal bodily functions.
- Many are harmless and some are beneficial.
- The microbiota varies depending on location, age, sex, diet, etc.
Learning Objectives
- Students should define normal microbiota and its functions.
- They must define permanent and temporary flora.
- They should explain the role of permanent flora.
- Students should study the microbiota in different body parts.
- They need to understand how the normal flora protects from diseases and their development.
What are Microbiota or Normal Flora?
- Microbiota weighs approximately 2.5 kg in the human colon.
- The microbiota consists mainly of bacteria.
- These organisms are continuously present in the human body.
- Under healthy conditions, microbiota are harmless and sometimes beneficial.
- The collective term for these organisms which inhabit the body is also called microbiota, commensals, or microflora.
About Gut Microbiota
- The human gut contains roughly 100 trillion microbes.
- Microbiota is approximately 10 times the number of microbial cells found in the entire human body.
- The gut microbiota encompasses around 5000 different species.
- It weighs approximately 2 kg.
- The gut microbiota includes bacteria, viruses, fungi, and parasites.
- Major species of bacteria include Prevotella, Ruminococcus, Bacteroidetes, and Firmicutes.
The Human Microbiome: What is Known? What is Unknown?
- 25 phyla, 2,000 genera, and 5,000 species are known.
- 80% of the metagenome is mappable.
- 316 million genes are known.
- Undetected unknowns include hidden taxa and strain-level diversity.
- ~20% of the sequences do not match microbial genomes.
- ~40% of genes lack matches in functional databases.
Stuff about Microbiota
- A fetus is sterile at birth.
- Microbiota develops after birth through contact with the environment, mother, air, food.
- Microbiota populations are unique to each individual and are influenced by several factors.
- Reduced amounts of normal microbiota can lead to infections by opportunistic microbes, like Candida albicans.
- The human body microbiota is crucial in developing natural resistance.
Why Should We Know About Microbiota?
- Understanding how infections result from injuries or specific body sites is important.
- Identification of microorganisms from infection sites is essential.
Transient Microbiota
- Transient microbiota is present temporarily on and within the human body.
- Transient microbes, residing in moist, warm body regions.
Why are these microbes temporary?
- Washing from external parts through bathing
- Incapable of competing with resident flora.
- Killed by resident flora products.
- Can't survive in acidic or alkaline sites.
- Removal by bodily secretions.
Where can we find Microbiota?
- Microbiota is present in body parts exposed to external environments.
- This includes Skin, Eyes and Ears, Respiratory Tract, Oral Cavity (Mouth), Gastrointestinal Tract, and Urogenital Tract.
Skin
- Skin acquires transient bacteria from the environment.
- Skin becomes dry and produces sweat and oil, causing transient bacteria to either die or be washed away.
- Resident bacteria inhabit any layer of skin.
- Aerobic bacteria like Staphylococcus epidermidis and Staphylococcus aureus reside on the outer skin layers.
- Anaerobic bacteria like Cutibacterium acnes are prevalent in deeper layers like hair follicles and sweat glands.
Eyes
- The conjunctiva mainly has Staphylococcus epidermidis.
- Staphylococcus aureus, Corynebacterium diphtheroids, and Streptococcus pneumoniae in lesser amounts.
Ears
- The middle and inner ear are sterile.
- The outer ear and auditory canal contain normal flora similar to skin.
- Microbes may enter the middle ear through coughs and sneezes, leading to infections.
Respiratory Tract
- Upper respiratory tracts (Nose and Throat) contain many microorganisms.
- Some are normal flora, others are opportunistic, and some are carried.
- Lower Respiratory tract is usually sterile.
Oral Cavity (Mouth)
- Oral cavity contains both aerobic and anaerobic bacteria.
- Common examples are C. diphtheroids, S. aureus, and S. epidermidis.
- Yeasts, molds, protozoa, and viruses also inhabit the mouth.
Oral Cavity Teeth and Gingiva
- Yeasts, molds, protozoa, and viruses are present in the mouth.
- Poor dental hygiene promotes bacterial growth leading to gum diseases and tooth decay.
- Risks of endocarditis after dental surgeries.
Gastrointestinal Tract
- Stomach has only a few bacteria due to acidity and enzymes.
- Small intestine has fewer normal flora due to bile.
- Colon has more normal flora, largely anaerobic organisms.
Gastrointestinal Tract Large Intestine
- Colon has more bacteria compared to other body parts.
- Approximately 99% of large intestine bacteria is anaerobic.
- Many fungi, protozoa, and viruses are also present.
- E. coli can lead to urinary tract infections if it moves out of the GI tract.
Microbiota in the Gastrointestinal Tract (GIT)
- Different bacteria genera are present.
- Organisms like Bacteroides fragilis lead to abdominal abscesses.
Urogenital Tract
- Kidneys, Ureters, and Urinary Bladder are sterile.
- The lower urethra and external opening contain bacteria, yeast, and viruses, including those found on skin.
- Vaginal Lactobacillus protects against opportunistic infections (e.g., Candida and bacterial vaginosis).
Genital Organs
- Male and female genitalia are sterile except the vagina.
- Lactobacillus protects the vagina from fungal and bacterial infections
Normal Flora in the Vagina
- Types of microorganisms found in vagina. Examples of organisms include Lactobacillus species.
- Common organism thriving in the absence of normal vaginal flora is Candida albicans (yeast).
Sterile Body Zones
- Listing of body parts which are essentially free from microorganisms.
- Examples include the middle ear, sinuses, paranasal sinuses, larynx, trachea, blood, bronchi and others.
Beneficial Functions of Normal Flora
- Protection from invaders, like pathogenic organisms
- Immune development in newborns
- Digestion enhancement by vitamin K provision
Importance of Microbiome
- Significance of organisms in microbiome in crucial body functions, like weight control, inflammatory bowel disease, and immune response..
- Fecal transplant from obese mice to germ-free mice resulted in obesity in the recipient mice, showing microbiome's significance in controlling body weight.
Harmful Effects of Normal Flora
- Infections from displaced normal flora (such as in bloodstream)
- Competitive advantage of pathogens due to reduced normal flora (e.g. Clostridium difficile after antibiotics)
- Harmful products formed from normal flora (e.g. carcinogenic compounds from food)
- Overgrowth in immune compromised individuals
Nutritional Modulation of the Gut Microbiome
- Nutritional factors influencing the composition of gut microbiota.
Western and Plant-Based Diets' Impact on Microbiome
- Differences in the microbiome composition related to different types of diets.
- Benefits and risks of different dietary patterns regarding nutrition-related diseases and chronic conditions.
Colonization Resistance
- The microbiota of the colon prevents the overgrowth of pathogens like Clostridioides difficile.
- Fecal transplant from healthy individuals can cure resistant antibiotic colitis
- Importance of microbial balance for overall health
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Description
Explore the fascinating world of microbiota, the microorganisms that inhabit our bodies and play vital roles in maintaining health. This quiz will help you define normal microbiota, differentiate between permanent and temporary flora, and understand their protective functions against diseases. Dive into the intricate relationships between microbiota and various body parts.