Podcast
Questions and Answers
What is the primary function of the ATP-ADP cycle?
What is the primary function of the ATP-ADP cycle?
Which metabolite is considered a common currency in redox reactions?
Which metabolite is considered a common currency in redox reactions?
What is the change in free energy (ΔG) when glucose is phosphorylated by ATP?
What is the change in free energy (ΔG) when glucose is phosphorylated by ATP?
During which process are NAD+ and FAD reduced to NADH and FADH2?
During which process are NAD+ and FAD reduced to NADH and FADH2?
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Which statement best describes intermediary metabolism?
Which statement best describes intermediary metabolism?
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Which statement accurately defines catabolic pathways?
Which statement accurately defines catabolic pathways?
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What is the primary function of anabolic pathways?
What is the primary function of anabolic pathways?
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What best describes a converging metabolic pathway?
What best describes a converging metabolic pathway?
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How do catabolic pathways contribute to anabolic pathways?
How do catabolic pathways contribute to anabolic pathways?
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Which of the following best characterizes the relationship between synthetic and degradative pathways?
Which of the following best characterizes the relationship between synthetic and degradative pathways?
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What is metabolism primarily concerned with?
What is metabolism primarily concerned with?
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Which molecule is described as the common currency in energy exchange?
Which molecule is described as the common currency in energy exchange?
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In what process is energy captured during metabolism?
In what process is energy captured during metabolism?
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What is the role of NADH in metabolism?
What is the role of NADH in metabolism?
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Which of the following does NOT represent a use of energy in organisms?
Which of the following does NOT represent a use of energy in organisms?
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What is an anabolic process?
What is an anabolic process?
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Which component is primarily involved in the transport of energy?
Which component is primarily involved in the transport of energy?
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What are inherited errors of metabolism most often linked to?
What are inherited errors of metabolism most often linked to?
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Which type of molecules are produced by anabolic pathways?
Which type of molecules are produced by anabolic pathways?
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What is a common characteristic of both anabolic and catabolic pathways?
What is a common characteristic of both anabolic and catabolic pathways?
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Which of the following molecules is considered energy-depleted?
Which of the following molecules is considered energy-depleted?
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Which regulation mechanism affects enzyme activity in metabolic pathways?
Which regulation mechanism affects enzyme activity in metabolic pathways?
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What primarily distinguishes anabolic pathways from catabolic pathways?
What primarily distinguishes anabolic pathways from catabolic pathways?
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Which of the following describes a function of metabolic intermediates?
Which of the following describes a function of metabolic intermediates?
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What happens to enzyme activity during phosphorylation?
What happens to enzyme activity during phosphorylation?
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What is one way that metabolic pathways are compartmentalized?
What is one way that metabolic pathways are compartmentalized?
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What role do allosteric activators play in metabolic pathways?
What role do allosteric activators play in metabolic pathways?
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What typically inhibits the activity of the first enzyme in a metabolic pathway?
What typically inhibits the activity of the first enzyme in a metabolic pathway?
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Which metabolic pathway synthesizes glucose from non-carbohydrate sources?
Which metabolic pathway synthesizes glucose from non-carbohydrate sources?
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What is a consequence of impaired enzyme activity in a metabolic pathway?
What is a consequence of impaired enzyme activity in a metabolic pathway?
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Which of the following is involved in lipid metabolism?
Which of the following is involved in lipid metabolism?
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Which pathway is responsible for the degradation of glucose to pyruvate?
Which pathway is responsible for the degradation of glucose to pyruvate?
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In carbohydrate metabolism, what is the outcome of glycogenolysis?
In carbohydrate metabolism, what is the outcome of glycogenolysis?
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What is the primary purpose of intermediary metabolism?
What is the primary purpose of intermediary metabolism?
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Which of the following processes refers to the synthesis of proteins from amino acids?
Which of the following processes refers to the synthesis of proteins from amino acids?
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What does oxidative phosphorylation primarily generate?
What does oxidative phosphorylation primarily generate?
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What is the main role of the urea cycle?
What is the main role of the urea cycle?
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During beta-oxidation, what are fatty acids converted into?
During beta-oxidation, what are fatty acids converted into?
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Which type of amino acid can be converted to glucose?
Which type of amino acid can be converted to glucose?
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What is the main function of glycolysis?
What is the main function of glycolysis?
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What is the overall free energy change (ΔG) for the reaction in which glucose is phosphorylated by ATP?
What is the overall free energy change (ΔG) for the reaction in which glucose is phosphorylated by ATP?
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In the electron transport chain, which primary electron acceptors are regenerated from NADH and FADH2?
In the electron transport chain, which primary electron acceptors are regenerated from NADH and FADH2?
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What does the gross change in free energy (ΔG) represent in coupled reactions involving ATP?
What does the gross change in free energy (ΔG) represent in coupled reactions involving ATP?
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Which metabolic processes are contained within intermediary metabolism?
Which metabolic processes are contained within intermediary metabolism?
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What is the primary function of ATP hydrolysis in cellular reactions?
What is the primary function of ATP hydrolysis in cellular reactions?
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What is the primary characteristic of catabolic pathways?
What is the primary characteristic of catabolic pathways?
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Which statement accurately describes anabolic pathways?
Which statement accurately describes anabolic pathways?
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What is an essential function of macromolecules generated via anabolic pathways?
What is an essential function of macromolecules generated via anabolic pathways?
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How do converging metabolic pathways generally function?
How do converging metabolic pathways generally function?
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What is a key distinction between synthetic and degradative pathways?
What is a key distinction between synthetic and degradative pathways?
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What is the definition of metabolism?
What is the definition of metabolism?
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Which processes utilize energy within an organism?
Which processes utilize energy within an organism?
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What role does ATP play in metabolic processes?
What role does ATP play in metabolic processes?
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What is a primary goal of catabolic processes?
What is a primary goal of catabolic processes?
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Which type of metabolism is focused on building larger molecules?
Which type of metabolism is focused on building larger molecules?
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What is meant by metabolic pathways?
What is meant by metabolic pathways?
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What is a potential consequence of inherited errors of metabolism?
What is a potential consequence of inherited errors of metabolism?
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Which of the following accurately describes energy capture in metabolism?
Which of the following accurately describes energy capture in metabolism?
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What is one way enzyme activity may be regulated in metabolic pathways?
What is one way enzyme activity may be regulated in metabolic pathways?
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Which molecules are considered energy-rich monomers in anabolic pathways?
Which molecules are considered energy-rich monomers in anabolic pathways?
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Which of the following describes a characteristic of catabolic pathways?
Which of the following describes a characteristic of catabolic pathways?
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What defines metabolic intermediates in cellular metabolism?
What defines metabolic intermediates in cellular metabolism?
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Which statement accurately describes energy coupling reactions?
Which statement accurately describes energy coupling reactions?
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What role does compartmentalization play in metabolic pathways?
What role does compartmentalization play in metabolic pathways?
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Which of the following is NOT a characteristic of anabolic pathways?
Which of the following is NOT a characteristic of anabolic pathways?
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What is a common regulatory mechanism for enzymes in metabolic pathways?
What is a common regulatory mechanism for enzymes in metabolic pathways?
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What is the primary role of allosteric feedback inhibition in metabolic pathways?
What is the primary role of allosteric feedback inhibition in metabolic pathways?
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What happens to substrate A when enzyme activity is impaired?
What happens to substrate A when enzyme activity is impaired?
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Which process involves breaking down glycogen into glucose?
Which process involves breaking down glycogen into glucose?
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What is the primary purpose of the Krebs cycle?
What is the primary purpose of the Krebs cycle?
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Which metabolic process synthesizes glucose from non-carbohydrate sources?
Which metabolic process synthesizes glucose from non-carbohydrate sources?
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What is a consequence of elevated levels of substrate A in a metabolic pathway?
What is a consequence of elevated levels of substrate A in a metabolic pathway?
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Which pathway is involved in the biosynthesis of triglycerides?
Which pathway is involved in the biosynthesis of triglycerides?
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What type of amino acids metabolize into substrates that can enter gluconeogenesis?
What type of amino acids metabolize into substrates that can enter gluconeogenesis?
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What role do allosteric inhibitors play in regulating enzyme activity?
What role do allosteric inhibitors play in regulating enzyme activity?
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During which metabolic process do fatty acids undergo step-wise degradation?
During which metabolic process do fatty acids undergo step-wise degradation?
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What is the result of glycolysis?
What is the result of glycolysis?
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Which cycle is primarily responsible for producing urea?
Which cycle is primarily responsible for producing urea?
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What is the primary outcome of anaerobic glycolysis?
What is the primary outcome of anaerobic glycolysis?
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What is the significance of the hydrolysis of ATP in energy metabolism?
What is the significance of the hydrolysis of ATP in energy metabolism?
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Which of the following statements best describes the role of NADH in metabolism?
Which of the following statements best describes the role of NADH in metabolism?
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During intermediary metabolism, which of the following best describes the conversion processes involved?
During intermediary metabolism, which of the following best describes the conversion processes involved?
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What role does oxidative phosphorylation play in cellular respiration?
What role does oxidative phosphorylation play in cellular respiration?
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Which process involves the transfer of electrons during the catabolism of substrates?
Which process involves the transfer of electrons during the catabolism of substrates?
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What is the main role of ATP within metabolic processes?
What is the main role of ATP within metabolic processes?
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Which of the following activities of the organism primarily utilizes energy?
Which of the following activities of the organism primarily utilizes energy?
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How are carbohydrates, fatty acids, and proteins ultimately related in metabolism?
How are carbohydrates, fatty acids, and proteins ultimately related in metabolism?
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What is the consequence of impaired enzyme activity in metabolic pathways?
What is the consequence of impaired enzyme activity in metabolic pathways?
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Which mechanism is commonly involved in the regulation of metabolic pathways?
Which mechanism is commonly involved in the regulation of metabolic pathways?
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What defines the relationship between catabolism and anabolism?
What defines the relationship between catabolism and anabolism?
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Which of the following best describes metabolism?
Which of the following best describes metabolism?
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During oxidative phosphorylation, what is primarily generated?
During oxidative phosphorylation, what is primarily generated?
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What type of metabolic pathway involves the breakdown of complex molecules into simpler ones?
What type of metabolic pathway involves the breakdown of complex molecules into simpler ones?
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Which of the following statements best distinguishes anabolic pathways from catabolic pathways?
Which of the following statements best distinguishes anabolic pathways from catabolic pathways?
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What is a direct consequence of the interdependence between catabolic and anabolic pathways in metabolism?
What is a direct consequence of the interdependence between catabolic and anabolic pathways in metabolism?
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Which of the following characteristics is NOT associated with catabolic pathways?
Which of the following characteristics is NOT associated with catabolic pathways?
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Which type of metabolic pathway can be characterized as diverging?
Which type of metabolic pathway can be characterized as diverging?
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Which statement correctly describes the relationship between anabolic and catabolic pathways?
Which statement correctly describes the relationship between anabolic and catabolic pathways?
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Which of the following molecules is characterized as an energy-rich metabolic intermediate?
Which of the following molecules is characterized as an energy-rich metabolic intermediate?
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What factor may influence the enzymatic activity in metabolic pathways?
What factor may influence the enzymatic activity in metabolic pathways?
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Which type of molecules are primarily involved as substrates in anabolic pathways?
Which type of molecules are primarily involved as substrates in anabolic pathways?
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What is a common feature of energy coupling reactions in metabolism?
What is a common feature of energy coupling reactions in metabolism?
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Which mechanism does NOT directly regulate enzyme activity in metabolic pathways?
Which mechanism does NOT directly regulate enzyme activity in metabolic pathways?
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Which of the following is an example of a simple organic molecule that serves as a precursor in anabolic pathways?
Which of the following is an example of a simple organic molecule that serves as a precursor in anabolic pathways?
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Which statement about the regulation of metabolic pathways is correct?
Which statement about the regulation of metabolic pathways is correct?
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What role do allosteric inhibitors play in metabolic pathways?
What role do allosteric inhibitors play in metabolic pathways?
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Which metabolic pathway is primarily responsible for synthesizing glucose from non-carbohydrate sources?
Which metabolic pathway is primarily responsible for synthesizing glucose from non-carbohydrate sources?
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What metabolic consequence arises from impaired enzyme activity in a pathway?
What metabolic consequence arises from impaired enzyme activity in a pathway?
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Which of the following processes involves the breakdown of triglycerides into glycerol and fatty acids?
Which of the following processes involves the breakdown of triglycerides into glycerol and fatty acids?
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What is a key characteristic of allosteric regulation in metabolic pathways?
What is a key characteristic of allosteric regulation in metabolic pathways?
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Which amino acid metabolism pathway is associated with both glucogenic and ketogenic pathways?
Which amino acid metabolism pathway is associated with both glucogenic and ketogenic pathways?
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During which metabolic process is energy extracted from NADH to generate ATP?
During which metabolic process is energy extracted from NADH to generate ATP?
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Which term best describes the process of synthesizing fatty acids from acetyl CoA?
Which term best describes the process of synthesizing fatty acids from acetyl CoA?
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What is the primary function of the urea cycle in protein metabolism?
What is the primary function of the urea cycle in protein metabolism?
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What is the end product of glycolysis?
What is the end product of glycolysis?
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Which metabolic pathway involves the conversion of glycogen back into glucose?
Which metabolic pathway involves the conversion of glycogen back into glucose?
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Which of the following metabolic processes primarily generates NADH?
Which of the following metabolic processes primarily generates NADH?
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What is one metabolic outcome of fatty acid oxidation?
What is one metabolic outcome of fatty acid oxidation?
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Which metabolic pathway is responsible for the breakdown of proteins into amino acids?
Which metabolic pathway is responsible for the breakdown of proteins into amino acids?
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Study Notes
Metabolism
- Metabolism is the sum of all chemical processes occurring within an organism that are necessary for life
- Metabolism is comprised of an integrated network of chemical reactions
- Many metabolic reactions are concerned with generating or using energy
Energy Use
- Energy is required for:
- Active transport of ions and molecules
- Performance of mechanical work (muscle contraction, cellular movement)
- Synthesis of macromolecules and other biomolecules from simple precursors
- Waste removal
ATP
- ATP is the universal currency in the energy exchange economy
- ATP is formed from the oxidation of food fuel
- Energy released from fuel compounds is captured in ATP
- ATP serves as the free-energy donor in most energy-requiring processes
NADH
- Carbohydrates, fatty acids, and protein food stuffs generate ATP and NADH
- Glycolysis, beta-oxidation, TCA cycle, and the electron transport chain are involved in the creation of ATP and NADH
Hydrolysis and Synthesis of ATP
- ATP + H2O ↔ ADP + Pi (-30.5kJ/mol)
- Forward reaction releases energy to drive other reactions
- Reverse reaction captures energy released from fuel compounds
- This ATP-ADP cycle is the fundamental mode of energy exchange in biology
- Most energy-requiring reactions are coupled to ATP hydrolysis
Redox Reactions
- Many cellular reactions involve electron exchange
- NADH is a common currency in redox reactions
Coupled Redox Reactions
- During catabolism, hydrogen from substrates is transferred to NAD+ and FAD
- NADH and FADH2 are reoxidised to NAD+ and FAD by O2 in the electron transport chain located on the inner mitochondrial membrane
Intermediary Metabolism
- The metabolic processes involved in the conversion of food to energy, structural and functional components of cells, energy storage, and waste
- Includes the interconversion of carbohydrates, proteins, and lipids
Metabolic Pathways
- Catabolic pathways are degradative, breaking complex molecules down into simple ones and releasing energy (exergonic)
- Anabolic pathways synthesize molecules, building complex molecules from simple ones, consuming energy (endergonic)
- ATP and NADH generated in catabolism can be used in anabolic pathways
Interdependence of Anabolic and Catabolic Pathways
- Anabolic and catabolic pathways are generally distinct
- This allows for fine-tuned control and allows both processes to occur simultaneously
- The pathways are still linked via
- Energy coupling reactions (ATP hydrolysis/synthesis)
- Shared metabolic intermediates
- Shared substrates/products
- Shared enzymes
Regulation of Metabolic Pathways
- Enzymes are key regulators of metabolic pathways
- Enzyme activity can be regulated by:
- Rate of enzyme synthesis/degradation
- Compartmentalization / subcellular localization
- Modification by another enzyme (phosphorylation/dephosphorylation)
- Allosteric activators/inhibitors
Allosteric Feedback Inhibition
- Metabolic pathways are often regulated by allosteric feedback inhibition
- The end-product inhibits the activity of an enzyme early in the pathway
- This usually occurs on the first irreversible step (the committed step)
- This allows for a rapid response to change in cellular conditions
Metabolic Consequences of Impaired Enzyme Activity
- Impaired enzyme activity can lead to:
- Accumulation of substrate
- Deficiency of product
- Diversion to alternate product
Major Metabolic Pathways and Processes
-
Carbohydrate metabolism
- Glycolysis
- Glycogenolysis
- Gluconeogenesis
- Glycogen synthesis
- Hexose monophosphate shunt (pentose phosphate pathway)
-
Protein metabolism
- Amino acid synthesis
- Deamination
- Transamination
- Urea cycle
- Ketogenesis
-
Lipid metabolism
- Beta-oxidation
- Ketogenesis
- Lipolysis
- Fatty acid synthesis
- Triglyceride synthesis
-
Common pathways
- Citric acid cycle (Krebs cycle, tricarboxylic acid cycle)
- Oxidative phosphorylation
Carbohydrate Metabolism
-
Glycolysis
- Degradation of glucose to pyruvate
-
Glycogenolysis
- Degradation of glycogen into glucose
-
Gluconeogenesis
- Synthesis of glucose from non-carbohydrate sources (e.g., amino acids)
-
Glycogen synthesis
- Synthesis of glycogen from glucose
Lipid Metabolism
-
Lipolysis
- Degradation of triglycerides into glycerol and fatty acids
-
Fatty acid oxidation
- Step-wise degradation of fatty acids into acetyl CoA
-
Fatty acid synthesis
- Synthesis of fatty acids from acetyl CoA
-
Lipogenesis
- Synthesis of triglycerides from glycerol and fatty acids
Protein Metabolism
-
Proteolysis
- Degradation of protein into amino acids
-
Protein synthesis
- Synthesis of protein from amino acids
-
Amino acid catabolism
- Degradation of amino acids into amino group and carbon backbone
-
Amino acid synthesis
- Synthesis of amino acids by transamination of metabolic intermediates
Intermediary Metabolism
- All of these processes are interconnected and utilize shared intermediates.
Metabolism
- Metabolism is the sum of all the chemical reactions in an organism that are necessary for life.
- Many metabolic reactions are related to energy generation or use.
- Organisms use energy for:
- Active transport of ions and molecules
- Mechanical work, for example, muscle contraction
- Synthesis of macromolecules, such as DNA, RNA, and proteins
- Removal of waste products
ATP is the Energy Currency
- Some reactions require energy, while others release energy. Energy can be transferred between reactions.
- Reactions need a common currency for energy exchange. This currency is ATP (adenosine triphosphate).
- ATP is formed from the oxidation of consumed food (fuel).
- Energy released from fuel compounds is captured in ATP.
- ATP is used as the free-energy donor in most processes that require energy.
Energy Production
- Carbohydrates, fatty acids, and proteins are metabolized, either directly or indirectly, to generate ATP and NADH.
- The pathways involved in this process include:
- Glycolysis
- Beta-oxidation
- The TCA cycle
- Electron transport coupled to oxidative phosphorylation
ATP Hydrolysis and Synthesis
- ATP + H2O ↔ ADP + Pi (ΔG = -30.5 kJ/mol)
- The forward reaction releases energy.
- The reverse reaction captures energy.
- The ATP-ADP cycle is the fundamental mode of energy exchange in biology.
- ATP hydrolysis is generally coupled with most energy-requiring reactions.
- A coupled reaction, for example:
- Glucose + Pi --> Glucose-6-Phosphate + H2O (ΔG = +13.8 kJ/mol)
- ATP + H2O --> ADP + Pi (ΔG = -30.5 kJ/mol)
- When combined, the energy from ATP hydrolysis drives the synthesis of glucose-6-phosphate.
Redox Reactions
- Many cellular reactions involve the exchange of electrons. NADH is a common currency in these reactions.
- NAD+ (Nicotinamide Adenine Dinucleotide) is a cofactor that plays a crucial role in redox reactions.
Coupled Redox Reactions:
- During catabolism, hydrogen from the substrate is transferred to NAD+ and FAD.
- NADH and FADH2 are reoxidized to NAD+ and FAD by oxygen (O2) in the electron transport chain located in the inner mitochondrial membrane.
Intermediary Metabolism
- Intermediary metabolism refers to metabolic processes converting food into energy.
- It involves the conversion of carbohydrates, proteins, and lipids into energy, structural components of the cell, energy storage, and waste.
Classification of Metabolic Pathways
- Metabolic pathways can be categorized as catabolic or anabolic:
- Catabolic: Degradation of molecules from complex to simple; exergonic (energy releasing).
- Anabolic: Synthesis of molecules from simple to complex; endergonic (energy requiring).
- ATP and NADH produced in catabolism are used for anabolic reactions.
- Monomers released from polymers provide building blocks for the synthesis of other macromolecules.
- There are three types of metabolic pathways:
- Converging: Usually catabolic (e.g., multiple starting molecules converge into one final product).
- Diverging: Usually anabolic (e.g., one starting molecule diverges into multiple products).
- Cyclic: Involve reactions in a cycle (e.g., TCA cycle).
Anabolic and Catabolic Pathway Interdependence and Independence
- Synthetic and degradative pathways are generally distinct, allowing for better control.
- Both processes can occur at the same time but often in different cells.
- Synthetic and degradative pathways are linked by:
- Energy coupling reactions (ATP hydrolysis/synthesis)
- Shared metabolic intermediates
- Shared substrates and products
- Shared enzymes
Regulation of Metabolic Pathways
- Each step of a metabolic pathway is catalyzed by a specific enzyme.
- Enzyme activity is regulated in several ways:
- Rate of enzyme synthesis and degradation
- Compartmentalization or subcellular localization
- Modification by another enzyme (e.g., phosphorylation and dephosphorylation)
- Allosteric activators and inhibitors
Allosteric Feedback Inhibition
- Metabolic pathways often use allosteric feedback inhibition.
- The end product of a pathway inhibits the activity of an enzyme at or near the beginning of the pathway.
- This enzyme usually catalyzes the first irreversible step (committed step) in the pathway.
- This allows for a rapid response to changes.
Cellular Homeostasis
- Regulation of metabolic pathways is crucial for cellular homeostasis.
- Organisms maintain cells in a steady state.
- When homeostasis is disturbed, changes are made to return the cell to a normal state.
Metabolic Consequences of Impaired Enzyme Activity
- An impaired enzyme can lead to:
- Accumulation of the substrate.
- Deficiency of the product.
- Diversion to an alternative product.
Major Metabolic Pathways and Processes
Carbohydrate Metabolism
- Includes:
- Glycolysis (degradation of glucose to pyruvate)
- Glycogenolysis (degradation of glycogen)
- Gluconeogenesis (synthesis of glucose from non-carbohydrate sources)
- Glycogen synthesis (glycogenesis, synthesis of glycogen from glucose)
- Anaerobic glycolysis (when oxygen is limited)
- Hexose monophosphate shunt (pentose phosphate pathway)
Protein Metabolism
- Includes:
- Amino acid synthesis
- Deamination
- Transamination
- Urea cycle
- Ketogenesis
Lipid Metabolism
- Includes:
- Beta-oxidation (degradation of fatty acids)
- Ketogenesis
- Lipolysis (degradation of triglycerides)
- Fatty acid synthesis
- Triglyceride synthesis
Common Pathways
- Includes:
- Citric acid cycle (Krebs cycle, tricarboxylic acid cycle): Oxidation of acetyl CoA to CO2, H2O, and NADH
- Oxidative phosphorylation: Extraction of energy from NADH to generate ATP
Specific Pathways
Carbohydrate Metabolism Explained
- Glycolysis: The breakdown of glucose into pyruvate, producing a small amount of ATP and NADH.
- Glycogenolysis: The breakdown of glycogen, a stored form of glucose, releasing glucose into the blood.
- Gluconeogenesis: The synthesis of glucose from non-carbohydrate sources, such as amino acids, lactate, or glycerol, when glucose levels are low.
- Glycogen synthesis (glycogenesis): The synthesis of glycogen from glucose, storing excess glucose for later use.
- Anaerobic glycolysis: The breakdown of glucose in the absence of oxygen, producing lactate as a byproduct.
- Hexose monophosphate shunt (pentose phosphate pathway): Produces NADPH, a reducing agent, and ribose-5-phosphate, a precursor for nucleotide synthesis.
Lipid Metabolism Explained
- Lipolysis: The breakdown of triglycerides into glycerol and fatty acids.
- Fatty acid oxidation: The stepwise breakdown of fatty acids into acetyl-CoA, which can enter the Krebs cycle.
- Fatty acid synthesis: The synthesis of fatty acids from acetyl-CoA.
- Glycerol synthesis: Synthesis of glycerol from glycolytic intermediates.
- Lipogenesis: The synthesis of triglycerides from glycerol and fatty acids.
Protein Metabolism Explained
- Proteolysis: The breakdown of proteins into amino acids.
- Protein synthesis: The synthesis of proteins from amino acids.
- Amino acid catabolism: The breakdown of amino acids into amino groups (nitrogen) and carbon backbones.
- Transamination: The transfer of an amino group from one amino acid to another to form a new amino acid.
- Urea cycle: The cycle that eliminates nitrogenous waste (ammonia) from the body in the form of urea.
Intermediary Metabolism Diagram
- A diagram illustrates how protein, glycogen, and triglycerides are interconnected through various metabolic pathways. They share common intermediates, including glucose, pyruvate, acetyl-CoA, and utilize pathways such as glycolysis, gluconeogenesis, and the Krebs cycle.
- This shows the crucial interdependence of these metabolic pathways.
Further Resources
- Suggested texts for further learning:
- Lippincott Illustrated Reviews: Biochemistry
- Marks' Basic Medical Biochemistry: A Clinical Approach
Metabolism
- The sum of all chemical processes within an organism.
- Involves an integrated network of chemical reactions.
- Many reactions are concerned with generating or using energy.
Cellular Energy Use
- Active transport of ions and molecules.
- Performance of mechanical work like muscle contraction.
- Synthesis of macromolecules from simple precursors.
- Waste removal.
ATP: The Energy Currency
- Some reactions require energy, while others release energy.
- ATP is the common currency for energy transfer.
- Formed from the oxidation of food fuel.
- Energy released from fuel compounds is captured in ATP molecules.
- Acts as the energy donor in most energy-requiring processes.
NADH: Electron Carrier
- NADH is a common currency for redox reactions.
- Involved in releasing the energy from fuel compounds for ATP generation.
Intermediary Metabolism
- Converts food into energy, structural and functional cellular components, energy storage and waste products.
- Includes interconversion of carbohydrates, proteins and lipids.
Metabolic Pathways
- Catabolic: Degradation of molecules from complex to simple, energy releasing (exergonic).
- Anabolic: Synthesis of molecules from simple to complex, energy requiring (endergonic).
- Converging: Catabolic pathways.
- Diverging: Anabolic pathways.
- Cyclic: Pathways with intermediates cycling.
Anabolic & Catabolic Pathway Interdependencies
- Often distinct, allowing for independent control of processes.
- Linked by energy coupling reactions (ATP hydrolysis/synthesis), shared metabolic intermediates, substrates/products, and enzymes.
Regulation of Metabolic Pathways
- Each step is catalyzed by a specific enzyme.
- Regulating enzyme activity:
- Rate of enzyme synthesis/degradation.
- Compartmentalization/subcellular localization.
- Modification by another enzyme (e.g. phosphorylation/dephosphorylation).
- Allosteric activators/inhibitors.
Allosteric Feedback Inhibition
- End product of the pathway inhibits an enzyme at or near the start.
- Often regulates the first, irreversible step (committed step) of a pathway.
- Allows for rapid response to change.
Cellular Homeostasis
- Maintaining a steady state within the cell.
- Regulation of metabolic pathways is essential for this.
- When steady-state is disturbed, changes are made to restore normal conditions.
Impaired Enzyme Activity
- Accumulation of substrate.
- Deficiency of product.
- Diversion to alternate product.
Major Metabolic Pathways & Processes
- Carbohydrate Metabolism: Glycolysis, glycogenolysis, gluconeogenesis, glycogen synthesis, anaerobic glycolysis, hexose monophosphate shunt (pentose phosphate pathway).
- Protein Metabolism: Amino acid synthesis, deamination, transamination, urea cycle, ketogenesis.
- Lipid Metabolism: β-oxidation, ketogenesis, lipolysis, fatty acid synthesis, triglyceride synthesis.
- Common Processes: Citric acid cycle (Krebs cycle, tricarboxylic acid cycle), oxidative phosphorylation.
Carbohydrate Metabolism
- Glycolysis: Degrades glucose to pyruvate.
- Glycogenolysis: Degrades glycogen into glucose.
- Gluconeogenesis: Synthesizes glucose from non-carbohydrate sources.
- Glycogen Synthesis: Synthesizes glycogen from glucose.
Lipid Metabolism
- Lipolysis: Degrades triglycerides into glycerol and fatty acids.
- Fatty Acid Oxidation: Degrades fatty acids into acetyl CoA for the Krebs cycle.
- Fatty Acid Synthesis: Synthesizes fatty acids from acetyl CoA.
- Lipogenesis: Synthesizes triglycerides from glycerol and fatty acids.
Protein Metabolism
- Proteolysis: Degrades protein into amino acids.
- Protein Synthesis: Synthesizes proteins from amino acids.
- Deamination: Removes amino group from amino acids.
- Transamination: Transfers amino groups between molecules.
- Urea Cycle: Eliminates excess nitrogen as urea.
Intermediary Metabolism Map
- Shows the interconnectedness of carbohydrate, protein and lipid metabolism.
Further Resources
- Lippincott Illustrated Reviews: Biochemistry
- Marks' Basic Medical Biochemistry: A Clinical Approach
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Description
This quiz covers the key concepts of metabolism, focusing on the chemical processes necessary for life. It explores the roles of ATP and NADH in energy exchange, as well as the mechanisms of energy use in cellular activities. Test your understanding of how these processes interconnect to sustain life.