Master the Enzymatic Mechanisms of V(D)J Recombination
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Questions and Answers

What is the rule for V-region rearrangement in DNA recombination?

  • 12/23 rule (correct)
  • 11/22 rule
  • 10/24 rule
  • 13/25 rule
  • What happens to the DNA molecule in V(D)J recombination?

  • It is cleaved at multiple locations
  • It is randomly cleaved
  • It is precisely cleaved at two locations (correct)
  • It is not cleaved
  • What is the double-heptamer sequence created in V(D)J recombination?

  • 5ʹGTACGTACGTACGT3ʹ
  • 5ʹACGTACGTACGT3ʹ
  • 5ʹCGTACGTACGTACG3ʹ
  • 5ʹCACAGTGCACAGTG3ʹ (correct)
  • What happens to the signal joint when the joining segments are in the same orientation?

    <p>It is contained in a circular piece of extrachromosomal DNA</p> Signup and view all the answers

    What do the V and J gene segments form after V(D)J recombination?

    <p>They join to form a coding joint</p> Signup and view all the answers

    What is the structure that the variable regions of immunoglobulin heavy and light chains are based on?

    <p>Immunoglobulin fold</p> Signup and view all the answers

    What forms the antibody-binding site?

    <p>Three loops of amino acids known as HV1, HV2, and HV3</p> Signup and view all the answers

    Where are the loops that form the antibody-binding site located?

    <p>Between the pairs of β sheets B and C, Cʹ and Cʹʹ, and F and G</p> Signup and view all the answers

    What is encoded by the first exon of the variable regions?

    <p>The antibody's leader sequence</p> Signup and view all the answers

    What is the function of the antibody's leader sequence?

    <p>Directs the antibody into the endoplasmic reticulum for surface expression or secretion</p> Signup and view all the answers

    What is the composition of the immunoglobulin fold?

    <p>Nine β sheets</p> Signup and view all the answers

    What is the role of the variable regions in a mature B cell?

    <p>They are encoded by a single exon.</p> Signup and view all the answers

    What are the HV1, HV2, and HV3 regions also known as?

    <p>CDR1, CDR2, and CDR3</p> Signup and view all the answers

    What is encoded by the first exon of the variable regions?

    <p>The antibody's leader sequence</p> Signup and view all the answers

    Where are the loops that form the antibody-binding site located?

    <p>Between the pairs of β sheets B and C, Cʹ and Cʹʹ, and F and G</p> Signup and view all the answers

    Study Notes

    V(D)J Recombination

    • The rule for V-region rearrangement in DNA recombination is that it occurs randomly, resulting in a unique sequence for each B cell.
    • During V(D)J recombination, the DNA molecule is rearranged, and the intervening DNA is deleted, forming a circular DNA molecule.
    • The double-heptamer sequence created in V(D)J recombination serves as a recognition sequence for the recombination machinery.
    • When the joining segments are in the same orientation, the signal joint is deleted, and the coding joints are joined.
    • The V and J gene segments form a continuous VJ exon after V(D)J recombination.

    Immunoglobulin Structure

    • The variable regions of immunoglobulin heavy and light chains are based on the immunoglobulin fold structure.
    • The antibody-binding site is formed by the hypervariable regions (HV).
    • The HV loops that form the antibody-binding site are located at the tips of the immunoglobulin fold.
    • The first exon of the variable regions encodes the leader sequence and the HV1, HV2, and HV3 regions.
    • The leader sequence is responsible for targeting the protein to the endoplasmic reticulum for synthesis.
    • The immunoglobulin fold consists of a beta-sheet structure with a specific arrangement of disulfide bonds.
    • The variable regions play a crucial role in a mature B cell, as they determine the specificity of the antibody.

    Hypervariable Regions

    • The HV1, HV2, and HV3 regions are also known as complementarity-determining regions (CDRs).
    • The first exon of the variable regions encodes the HV1, HV2, and HV3 regions.
    • The HV loops are located at the tips of the immunoglobulin fold, forming the antibody-binding site.

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    Description

    Test your knowledge on the enzymatic mechanisms involved in V(D)J recombination, a crucial process in the rearrangement of V-regions in the immune system. Learn about the 12/23 rule, protein interactions, and endonuclease activity.

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