Master the Enzymatic Mechanisms of V(D)J Recombination

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Questions and Answers

What is the rule for V-region rearrangement in DNA recombination?

  • 12/23 rule (correct)
  • 11/22 rule
  • 10/24 rule
  • 13/25 rule

What happens to the DNA molecule in V(D)J recombination?

  • It is cleaved at multiple locations
  • It is randomly cleaved
  • It is precisely cleaved at two locations (correct)
  • It is not cleaved

What is the double-heptamer sequence created in V(D)J recombination?

  • 5ʹGTACGTACGTACGT3ʹ
  • 5ʹACGTACGTACGT3ʹ
  • 5ʹCGTACGTACGTACG3ʹ
  • 5ʹCACAGTGCACAGTG3ʹ (correct)

What happens to the signal joint when the joining segments are in the same orientation?

<p>It is contained in a circular piece of extrachromosomal DNA (B)</p> Signup and view all the answers

What do the V and J gene segments form after V(D)J recombination?

<p>They join to form a coding joint (A)</p> Signup and view all the answers

What is the structure that the variable regions of immunoglobulin heavy and light chains are based on?

<p>Immunoglobulin fold (A)</p> Signup and view all the answers

What forms the antibody-binding site?

<p>Three loops of amino acids known as HV1, HV2, and HV3 (D)</p> Signup and view all the answers

Where are the loops that form the antibody-binding site located?

<p>Between the pairs of β sheets B and C, Cʹ and Cʹʹ, and F and G (A)</p> Signup and view all the answers

What is encoded by the first exon of the variable regions?

<p>The antibody's leader sequence (D)</p> Signup and view all the answers

What is the function of the antibody's leader sequence?

<p>Directs the antibody into the endoplasmic reticulum for surface expression or secretion (D)</p> Signup and view all the answers

What is the composition of the immunoglobulin fold?

<p>Nine β sheets (A)</p> Signup and view all the answers

What is the role of the variable regions in a mature B cell?

<p>They are encoded by a single exon. (A)</p> Signup and view all the answers

What are the HV1, HV2, and HV3 regions also known as?

<p>CDR1, CDR2, and CDR3 (B)</p> Signup and view all the answers

What is encoded by the first exon of the variable regions?

<p>The antibody's leader sequence (C)</p> Signup and view all the answers

Where are the loops that form the antibody-binding site located?

<p>Between the pairs of β sheets B and C, Cʹ and Cʹʹ, and F and G (D)</p> Signup and view all the answers

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Study Notes

V(D)J Recombination

  • The rule for V-region rearrangement in DNA recombination is that it occurs randomly, resulting in a unique sequence for each B cell.
  • During V(D)J recombination, the DNA molecule is rearranged, and the intervening DNA is deleted, forming a circular DNA molecule.
  • The double-heptamer sequence created in V(D)J recombination serves as a recognition sequence for the recombination machinery.
  • When the joining segments are in the same orientation, the signal joint is deleted, and the coding joints are joined.
  • The V and J gene segments form a continuous VJ exon after V(D)J recombination.

Immunoglobulin Structure

  • The variable regions of immunoglobulin heavy and light chains are based on the immunoglobulin fold structure.
  • The antibody-binding site is formed by the hypervariable regions (HV).
  • The HV loops that form the antibody-binding site are located at the tips of the immunoglobulin fold.
  • The first exon of the variable regions encodes the leader sequence and the HV1, HV2, and HV3 regions.
  • The leader sequence is responsible for targeting the protein to the endoplasmic reticulum for synthesis.
  • The immunoglobulin fold consists of a beta-sheet structure with a specific arrangement of disulfide bonds.
  • The variable regions play a crucial role in a mature B cell, as they determine the specificity of the antibody.

Hypervariable Regions

  • The HV1, HV2, and HV3 regions are also known as complementarity-determining regions (CDRs).
  • The first exon of the variable regions encodes the HV1, HV2, and HV3 regions.
  • The HV loops are located at the tips of the immunoglobulin fold, forming the antibody-binding site.

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