Ligand Binding Heterogeneity and Cooperativity in Receptor Systems
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Questions and Answers

What is one way to assess ligand specificity?

Competitive-binding assay

What is the property of biological receptors binding tightly to a single natural ligand called?

Specificity

How can receptor specificity be confirmed in a competitive-binding assay?

The amount of ligand bound is not affected by the presence of other ligands

What is the reason behind proteins tending to stick to glass?

<p>Polar surfaces interacting with each other</p> Signup and view all the answers

What is the reason behind proteins having some affinity for cell surfaces?

<p>Cell surfaces being quite polar</p> Signup and view all the answers

How do molecules interact with each other?

<p>Noncovalently</p> Signup and view all the answers

What special statistical effects need to be considered when interpreting the nonlinear Scatchard plots that arise from lattice binding?

<p>Special statistical effects need to be considered when interpreting the nonlinear Scatchard plots that arise from lattice binding.</p> Signup and view all the answers

How can Scatchard plots alone not distinguish between heterogeneous binding sites and cooperativity?

<p>Scatchard plots alone cannot distinguish between heterogeneous binding sites and cooperativity because they both result in nonlinear plots.</p> Signup and view all the answers

How can cooperativity and receptor heterogeneity be distinguished?

<p>Cooperativity and receptor heterogeneity can be distinguished by measuring the effect of bound ligand on the value of the dissociation rate constant, koff.</p> Signup and view all the answers

How is the value of koff measured?

<p>The value of koff can be measured by allowing ligand and receptor to reach equilibrium, removing free ligand, and then measuring the dissociation of ligand over time.</p> Signup and view all the answers

In practice, how is the decrease in the concentration of bound ligand usually measured?

<p>In practice, the decrease in the concentration of bound ligand is usually measured.</p> Signup and view all the answers

What might limit the access of additional molecules of ligand to free sites on the lattice?

<p>Certain arrangements of large ligands on lattice-like receptors may limit the access of additional molecules of ligand to free sites on the lattice.</p> Signup and view all the answers

What are the types of electrostatic forces that contribute to the innate affinity between molecules?

<p>Coulombic attractions, hydrogen bonds, and dispersion forces</p> Signup and view all the answers

Why are noncovalent interactions important in biological processes?

<p>They are important for catalysis of chemical reactions, neutralization of foreign toxins, and stimulation of cellular activities.</p> Signup and view all the answers

What do receptors and ligands exchange interactions with before interacting with each other?

<p>Solvent and solute molecules</p> Signup and view all the answers

What are biological chemists trying to understand regarding receptor-ligand interactions?

<p>The molecular details</p> Signup and view all the answers

What is the goal of medicinal chemists in relation to receptor-ligand interactions?

<p>To develop useful pharmaceutics</p> Signup and view all the answers

Why are organic chemists trying to develop synthetic systems that mimic biological interactions?

<p>To mimic biological interactions</p> Signup and view all the answers

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