Ion Exchange Chromatography, B.Pharm

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Questions and Answers

In the context of ion exchange chromatography, if a resin exhibits a higher degree of cross-linking, which of the following phenomena is LEAST likely to occur, thereby influencing the separation process?

  • Diminished diffusion rates of ionic species within the resin, affecting equilibrium kinetics.
  • Reduced swelling of the resin matrix in aqueous solutions, leading to decreased pore size.
  • Enhanced mechanical rigidity and structural integrity of the resin beads under high-pressure conditions.
  • Improved accessibility of internal binding sites for large molecules, thus increasing the resin's overall capacity. (correct)

Considering the interplay between concentration and charge of ions in ion exchange chromatography, under which specific condition would an ion with a lower charge displace an ion with a higher charge from the resin?

  • When the flow rate of the mobile phase is increased exponentially, favoring kinetic effects.
  • When the mobile phase contains a significantly higher concentration of the lower-charged ion. (correct)
  • When the resin exhibits an exceptionally high affinity for highly charged ions, irrespective of concentration.
  • When the temperature of the chromatographic system is drastically reduced.

Regarding the selectivity coefficient in ion exchange chromatography, assuming a scenario where two competing ions (A and B) are present, and the resin shows a marginally higher affinity for ion A, how can the chromatographic conditions be manipulated to favor the preferential elution of ion B?

  • Introduce a complexing agent into the mobile phase that selectively binds to ion A, reducing its effective concentration. (correct)
  • Switch to a resin with a significantly larger particle size to improve mass transfer properties.
  • Raise the operating temperature to increase the kinetic energy of ion B facilitating faster elution.
  • Increase the length of the chromatographic column to enhance resolution between A and B.

In the context of gel chromatography, what is the implication of a molecule's size being significantly larger than the exclusion limit of the gel matrix?

<p>The molecule will be completely excluded from the pores and elute rapidly, near the void volume. (A)</p> Signup and view all the answers

In affinity chromatography, what is true regarding the selection of a ligand for purifying a specific target protein?

<p>The ligand must possess a specific and reversible binding affinity for the target protein, allowing for selective elution. (C)</p> Signup and view all the answers

Given the principle of ion exchange chromatography, which mechanism is MOST critical to the separation of charged molecules?

<p>Reversible electrostatic interactions between the analyte ions and the oppositely charged functional groups on the resin. (A)</p> Signup and view all the answers

How does the pH of the buffer significantly influence the separation in cation exchange chromatography?

<p>It determines the degree of ionization of both the analyte and the functional groups on the resin, affecting binding affinity. (D)</p> Signup and view all the answers

Considering a scenario where a mixture of proteins needs to be separated using ion exchange chromatography, if one protein has a significantly higher isoelectric point (pI) than the others, which type of resin and pH gradient would be most appropriate for its purification?

<p>Anion exchange resin with an increasing pH gradient to deprotonate the protein and increase its negative charge. (C)</p> Signup and view all the answers

In gel chromatography, a column is packed with a matrix of porous beads. If two molecules of similar size are applied to the column, but one is slightly more hydrophobic than the other, how will this difference most likely affect their elution profile?

<p>The more hydrophobic molecule will elute slower due to increased adsorption to the stationary phase. (D)</p> Signup and view all the answers

What role does the 'spacer arm' play in the design and performance of affinity chromatography?

<p>It provides physical separation between the matrix and the ligand, reducing steric hindrance and improving accessibility. (A)</p> Signup and view all the answers

In the context of ion exchange resins, sulfonate groups ($-SO_3^−$) are commonly used as functional groups. What characteristics does a resin containing a high density of sulfonate groups most likely exhibit?

<p>Strong cation exchange capacity effective over a broad pH range. (C)</p> Signup and view all the answers

In affinity chromatography, non-specific binding can reduce the efficiency of purification. Which strategy is LEAST likely to minimize non-specific binding?

<p>Using a highly concentrated sample to outcompete non-specific binding sites. (D)</p> Signup and view all the answers

Suppose you are performing gel filtration chromatography to estimate the molecular weight of a protein, and your protein elutes at a volume earlier than expected based on its known molecular weight. Which factor could plausibly explain this anomalous behavior?

<p>The protein is present in a highly concentrated solution, leading to aggregation. (D)</p> Signup and view all the answers

In ion exchange chromatography, what is the MOST likely consequence of using an excessively high flow rate?

<p>Reduced binding efficiency and reduced separation due to kinetic limitations. (D)</p> Signup and view all the answers

In affinity chromatography, after the target molecule has been selectively bound to the ligand, what strategy would BEST facilitate its elution while preserving its biological activity?

<p>Competitive elution using a high concentration of a molecule with greater affinity for the ligand than the target molecule. (A)</p> Signup and view all the answers

Flashcards

Ion exchange chromatography

Ion exchange chromatography separates ions and polar molecules based on their affinity to the exchanger.

Ion exchange technique use

This technique exchanges ions between a solution and a resin, and separates charged molecules like proteins and amino acids.

Cation exchange

Cation exchange involves buffer solutions carrying the pH between 4-7

Anion exchange

Anion exchange uses buffers with a pH between 7-10 to separate anions in solution.

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Resin Columns

Cation and anion exchange resin columns separate ions using charged resins.

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Cation Exchange Equation

The exchanging ions are cations and this is represented by the equation given below: S-x-c+ + mt S-x-m++c+

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Anion Exchange Equation

In Anion exchange chromatography the exchanging ions are anions and this is represented by the equation S-XA + B S-XB +A

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Cross-linking in resins

Cross-linking affects resin rigidity and pore size; more cross-linking creates more rigid resins with smaller pores.

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Ion concentration effect

High ion concentration favors exchanging ions

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Ion size effect

Smaller solvated ions exhibit a greater binding affinity than the larger ones.

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Ion exchange capacity

Functional groups per unit weight

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Gel chromatography

Used to determine molecular weight based on differences in molecular size

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Chromatography Composites

Stationary phase, mobile phase, pump and detectors compose the chromatography system

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Affinity chromatography

Technique which uses specific biological interaction to separate biochemical mixtures

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Phase composites

Spacer arm, Ligand and Matrix all components for affinity phase.

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Study Notes

  • Instrumental analysis, B.Pharm, 7th semester

Ion Exchange Chromatography

  • Defined as a process allowing the separation of ions and polar molecules.
  • Separation based on their affinity for the exchanger.
  • The technique is usable for any kind of charged molecules.
  • Examples include large proteins, small nucleotides, amino acids, and peptides, etc.
  • It is based on the exchange of ions in solution with those present in the ion exchange resin.
  • Two classifications exist: cation exchange and anion exchange.

Cation Exchange

  • It is carried out with buffer having a pH between 4-7.
  • Cations present in solution separate and exchange for similar ions in cation exchange resins.
  • Cations are retained by the solid matrix.

Anion Exchange

  • Separation uses anion exchange resin.
  • The chromatography is carried out with buffer having a pH between 7-10.
  • Anions in solution separate for similar ions in anion exchange resin.
  • Anions are retained by the solid matrix.

Mechanism of Ion Exchange Process

  • Cation and anion exchange resin columns are used for the separation of cations and anions.
  • Separation also relies on the binding of analytes to positively or negatively charged groups fixed on a stationary phase.
  • Ions compete with similarly charged ions to bind to oppositely charged ionic functional groups.

Cation Exchange Chromatography

  • Exchangeable ions are cations, represented by a given equation.
  • In this process, the eluent cation (M⁺) is replaced with the analyte cation (C⁺) that is bound to the anion (X⁻) fixed on the chromatographic support (S).

Anion Exchange Chromatography

  • Exchangeable ions are anions, and are represented by a given equation.
  • In this process, the eluent anion (B⁻) is replaced with the analyte anion (A⁻) that is bound to the cation (X⁺) fixed to the chromatographic support (S).

Factors Affecting Ion Exchange

Nature and Properties of Ion Exchanged Resins

  • More cross-linking agent: resin becomes more rigid with smaller pore size, and swelling decreases.
  • When swelling decreases, separation of different sizes is difficult.

Concentration and Charge of Ions

  • If resin has a higher charge, a solution has a lower charge.
  • Exchange is favored at higher concentration.
  • If resin has a lower charge, a solution has a high charge.
  • Exchange is favored at low concentrations.

Solvated Size of the Solute Ions

  • Smaller solvated sized ions exhibit a greater binding affinity, when compared to larger ions.
  • A smaller ion gets easily retained in the resin pores.

Porosity

  • High porosity offers a large surface area covered by charged groups.
  • High porosity provides a high binding capacity.

Properties of Ion Exchange Resins

Ion Exchange Capacity

  • The property is determined by the number of functional groups per unit weight of the resin.
  • Ion exchange capacity is measured with a particular ion.
  • Ion exchange capacity of a resin is useful.

Concentration Estimation

  • It measures the concentration of the competing ion.
  • Resins with higher capacity perform well, when using more concentrated eluents.

Swelling Characteristics

  • Organic resin exchangers have cross-linked polymer chains.
  • When coming in contact with water, outer functional groups get solvated and the polymer chains unfold.
  • The degree of swelling depends on the solution's composition.

Ion Exchange Selectivity

  • Selectivity coefficient can determine the relative affinities of ion exchangers for different ions.
  • A well-defined affinity series for anions and cations are obtainable by simple experiments.

Applications

  • Total content of cation in a solution
  • Concentration of traces of an electrolyte
  • Softening of hard water
  • Analysis of natural and industrial water
  • Separation of complex mixtures of biochemical compounds
  • Separation of amino acids and sugars.

Methodology, Column Method

  • The technique involves separation of mixture components on the basis of differences in the selectivity coefficients for the resin.
  • The apparatus consists of a glass column fitted with a glass wool plug at the low end, and a sintered glass disc.
  • A slurry of resin is made in distilled water, then gradually poured into the column.
  • Proper packing is key: ensure no air bubbles remain.
  • The column is back-washed with distilled water.
  • Water flow stops and the resin settles.
  • Excess water will then drain off.

Gel Chromatography

  • The technique's component separation is based on the difference in molecular size.
  • Techniques: gel filtration and gel permeation.
  • Molecules are separated based on size.
  • It is also called molecular sieve chromatography.

Theory of Separation

  • A column is made up of swollen gel particles.
  • The solvent is used to swell the gel into a suitable tubular container.
  • The equation below displays this relationship where Vt is the total volume of the column.
  • Vt = Vo + Vi + Vm
  • Vo = volume of the mobile phase outside the gel particles
  • Vi = volume of the internal pores of the gel particles
  • Vm = volume of the stationary phase, is the gel matrix itself

  • A column is also filled with swollen gel beads, and acts as a molecular sieve.
  • A mixture with molecules is poured over the column.
  • Large molecules quickly elute, while smaller are retained for longer within the pours.
  • Large molecules are collected first.

Instrumentation

Stationary Phase

  • Porous and permeable composition.
  • Well defined and ranging polymer gel beads.
  • Examples: Dextran, Agarose gel, Acrylamide gel.

Mobile Phase

  • Uses a liquid which will dissolve the biomolecules and form the mobile phase.
  • Examples: Toluene, water, and tetrahydrofuran.

Pump

  • Pumps: syringe or reciprocating.
  • Pumps must have a highly consistent flow rate.

Detectors

  • Refractive index detectors
  • Ultraviolet absorbent detectors
  • Light scattering detectors

Application

  • Determination of molecular weight
  • Determination of Purity
  • Protein fractionation
  • Separation of sugar, proteins, and peptides.

Affinity Chromatography

  • The used technique separates biochemical mixtures based on biological interactions, such as those between an antigen and antibody, or an enzyme and substrate.
  • It involves a single purification step, but is time consuming.
  • Separation occurs from a substance's affinity, to a molecule where it can specifically bind.
  • There are following components: Matrix, Spacer Arm, and Ligand

Componants of Affinity Chromatography - Matrix

  • Support used for ligand coupling.
  • Materials are available in a range of particle and pore sizes.
  • Examples include agarose, polyacrylamide, and dextran.

Componants of Affinity Chromatography - Spacer Arm

  • Used to improve binding between a ligand and target molecule
  • Efficient binding is achieved by introducing a spacer arm between a matrix and ligand

Componants of Affinity Chromatography - Ligand

  • Molecules that bind reversibly to a group of molecules
  • Ligands exhibit specific and reversible binding for that target substance.

Procedure

  • A sample is injected into the affinity chromatography column.
  • Only substances with an affinity for the resin, will be retained by the column.
  • Substances with no affinity for the ligand, elute off the column.
  • Retained substances can be eluted by altering pH levels.
  • Other ways to change substance: salt concentrations and organic solvents.

Application

  • Genetic engineering
  • Nucleic acid purification
  • Vaccine production
  • Antibody purification from blood serum
  • Determination of biological compounds

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