Investigating Science Skills

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Questions and Answers

A researcher posits that inundating Arabidopsis thaliana with varying spectral irradiances will differentially affect the expression of genes associated with flavonoid biosynthesis. Which element represents the most direct independent variable?

  • The quantified concentration of anthocyanins derived from each *A. thaliana* cohort.
  • The precise spectral emission of each light source. (correct)
  • The total above-ground biomass from each cohort.
  • The photoperiod at which *A. thaliana* is cultivated.

A laboratory's SOP mandates that all analytical balances undergo calibration exclusively by certified metrologists utilizing NIST-traceable reference standards. Adherence to this SOP guarantees both accuracy and precision in quantitative analyses.

False (B)

During the synthesis of a novel ruthenium-based catalyst, a researcher observes a persistent discrepancy between theoretical and actual yields. Formulate three distinct, yet plausible, hypotheses, each addressing potential sources of systematic error inherent to the experimental protocol.

  1. Incomplete reaction due to underestimated activation energy, 2. Loss of product during purification (sublimation or solubility in the eluent), 3. Inaccurate quantification of starting materials (inhomogeneity or adsorbed moisture).

In a spectrophotometric assay, deviations from Beer-Lambert's Law are observed at high analyte concentrations. These deviations are primarily attributed to ______ and/or ______, which renders the linear relationship invalid.

<p>chemical association##stray light effects</p> Signup and view all the answers

Match each ethical guideline to its corresponding purpose in scientific research involving human subjects:

<p>Informed Consent = Ensuring participants understand the risks and benefits of participation. Beneficence = Maximizing possible benefits and minimizing potential harm to participants. Justice = Distributing benefits and burdens equitably among all participants. Respect for Persons = Protecting the autonomy and privacy of participants.</p> Signup and view all the answers

Consider a scenario where a researcher aims to investigate the impact of a novel CRISPR-Cas9 gene editing technique on the metabolic pathway of Saccharomyces cerevisiae. Post-editing, the researcher observes a significant alteration in the production of ethanol. Which of the following represents the MOST appropriate dependent variable to quantify this metabolic shift with high fidelity?

<p>The change in glucose concentration, measured using high-performance liquid chromatography (HPLC). (C)</p> Signup and view all the answers

During the validation of an analytical method in a regulated pharmaceutical lab, documenting the qualifications of all personnel involved in the method's development and execution constitutes a purely administrative requirement with negligible impact on the eventual reliability of the data.

<p>False (B)</p> Signup and view all the answers

A graduate student intends to explore the impact of varying soil pH on the accumulation of heavy metals in the leaves of Brassica napus. Besides soil pH and heavy metal concentration, list three crucial environmental parameters that demand meticulous control to ensure the study's internal validity.

<ol> <li>Consistent soil moisture content; 2. Uniform PAR (photosynthetically active radiation); and 3. Stabilized growth chamber temperature.</li> </ol> Signup and view all the answers

The phenomenon by which a seemingly inert substance elicits a therapeutic effect, typically due to patient expectancy and neurological responses, is known as the ______ effect. Its mitigation often mandates the incorporation of a ______ group in clinical trials.

<p>placebo##control</p> Signup and view all the answers

Associate the type of graph with its optimal usage for visualizing data:

<p>Pie Chart = Illustrating the proportion of categorical data relative to a whole dataset. Scatter Plot = Determining the correlation between two continuous variables. Box Plot = Representing the distribution of a dataset, highlighting medians, quartiles, and outliers. Histogram = Visualizing the frequency distribution of a single continuous variable.</p> Signup and view all the answers

In a study assessing the efficacy of a novel chemotherapeutic agent, researchers initially observe promising results in vitro. However, subsequent in vivo trials reveal substantially diminished efficacy due to elevated rates of hepatic metabolism. To circumvent hepatic metabolism, which intervention should be used?

<p>Encapsulation of the agent within liposomal entities tailored for targeted delivery. (B)</p> Signup and view all the answers

The exclusive allocation of research funding toward studies exhibiting statistically significant findings, disregarding those with non-significant or null results, maximizes the collective advancement and dissemination of scientific knowledge.

<p>False (B)</p> Signup and view all the answers

During validation tests for a novel diagnostic ELISA, your team encounters unacceptably high rates of false positive results. Propose three discrete modifications to the experimental protocol or assay components that are expected to substantially reduce non-specific binding.

<ol> <li>Optimization of blocking buffer composition; 2. Reducing the antibody concentration; and 3. Incorporating stringent wash steps with optimized buffers..</li> </ol> Signup and view all the answers

During the chromatographic separation using HPLC, peak ______ is a critical parameter that measures the efficiency of separation, indicating the narrowness of the eluting peaks, while also being inversely related to the ______ of the column packing material.

<p>resolution##particle size</p> Signup and view all the answers

Match each bias type with its primary consequence in scientific research:

<p>Confirmation Bias = Selectively interpreting evidence that confirms an existing belief. Selection Bias = Systematically favoring certain individuals or groups in a study, compromising representativeness. Recall Bias = Differential accuracy in recalling past events between study groups. Observer Bias = Systematic errors in recording or interpreting information.</p> Signup and view all the answers

Researchers using a novel 'lab-on-a-chip' device for rapid bacterial identification note significant discrepancies in results obtained across different production batches of the microfluidic chips. These inconsistencies are MOST likely attributable to:

<p>Subtle variations in PDMS polymerization kinetics and channel dimensions during chip fabrication. (D)</p> Signup and view all the answers

In ecological studies, complete eradication of a highly invasive species invariably leads to restoration of indigenous biodiversity and ecosystem equilibrium, irrespective of secondary trophic cascades.

<p>False (B)</p> Signup and view all the answers

A biostatistician reviews a clinical trial protocol proposing enrichment strategies based solely on easily accessible demographic data (e.g., age, BMI) to enhance treatment effect detection. Critique the ethical and statistical limitations inherent to this enrichment design.

<p>Demographic-based enrichment risks disparate treatment impacts, violates principles of justice and introduces potential confounding if demographics correlate with unmeasured factors affecting treatment response.</p> Signup and view all the answers

During nanoscale material characterization using Atomic Force Microscopy (AFM), the emergence of cantilever oscillation artifacts, especially when operating in tapping mode, necessitates careful optimization of ______ parameters and systematic application of ______ algorithms to ensure valid topographical reconstructions.

<p>feedback loop##image flattening</p> Signup and view all the answers

Connect each statistical test to its most appropriate application scenario:

<p>t-test = Comparing means of two independent groups with normally distributed data. ANOVA = Comparing means of three or more independent groups with normally distributed data. Chi-Square Test = Analyzing association between two categorical variables. Regression Analysis = Modeling the relationship between a dependent variable and one or more independent variables.</p> Signup and view all the answers

Researchers undertaking a large-scale metagenomic survey encounter a significant challenge in accurately quantifying the relative abundance of microbial taxa due to inherent biases introduced during DNA extraction and PCR amplification steps. Which strategy will MOST effectively mitigate these biases and enhance the accuracy of downstream analyses?

<p>Apply computational correction algorithms based on known biases of specific primers and extraction methods. (A)</p> Signup and view all the answers

A comprehensive literature review, meticulously executed and devoid of subjective interpretation, absolves researchers from the ethical imperative of replicating prior experimental results before formulating novel hypotheses.

<p>False (B)</p> Signup and view all the answers

You observe inconsistent performance metrics for a machine learning algorithm deployed to classify radiological images, despite maintaining a stable, high-quality training dataset. Formulate three root causes.

<ol> <li>Concept drift in population data; 2. Unaccounted-for data bias from data collection methods; 3. Overfitting.</li> </ol> Signup and view all the answers

In the absence of pre-existing knowledge, investigators must often rely on limited sample sizes, therefore raising the risk of ______ error. This form of error occurs when a ______ hypothesis gets rejected.

<p>Type II##false</p> Signup and view all the answers

Classify different types of scientific misconduct with the relevant consequences:

<p>Fabrication = Inventing data and presenting it as real. Falsification = Manipulating research materials or processes. Plagiarism = Using someone else's work without attribution. Image Manipulation = Altering images (e.g., blots, micrographs) to misrepresent results.</p> Signup and view all the answers

When attempting to solubilize a novel, highly lipophilic drug candidate for in vitro cell culture assays, the research team finds that standard solvents (e.g., DMSO, ethanol) induce cytotoxicity at concentrations required for drug dissolution. To circumvent this issue, the MOST appropriate approach is to:

<p>Complex the drug candidate with cyclodextrins to enhance its aqueous solubility and reduce off-target effects. (A)</p> Signup and view all the answers

Stratified random sampling inherently eliminates selection bias and guarantees perfect representativeness across all demographic subgroups within a population-based study.

<p>False (B)</p> Signup and view all the answers

In high-content screening of chemical libraries for compounds that modulate mitochondrial membrane potential ($\Delta\Psi_m$), your positive control (CCCP) unexpectedly fails to elicit the anticipated depolarization effect. Propose three testable hypotheses.

<ol> <li>CCCP degradation or dispensing error; 2. Cell line resistance to CCCP and genetic mutation; 3. Plate reader malfunction.</li> </ol> Signup and view all the answers

When applying a Bonferroni correction to adjust for multiple comparisons in a series of $n$ statistical tests, the original alpha level ($\alpha$) is divided by ______, therefore reducing the probability of a Type ______ error at the expense of power.

<p>n##I</p> Signup and view all the answers

Match each term with its correct identification.

<p>Interpolation = Predicting values within a range of tested data. Extrapolation = Predicting values the range of tested data. Accurate Results = Obtained data close to original value. Precise Results = Measurements of consistent values.</p> Signup and view all the answers

In a prospective cohort study evaluating environmental risk factors for neurodegenerative disease, researchers observe a weak, non-significant association between exposure to a specific pesticide and disease incidence after 20 years of follow-up. Which of the following steps is the LEAST likely to improve the statistical power and robustness of their findings?

<p>Retrospectively ascertain disease status in previously excluded individuals based on initial enrollment criteria. (C)</p> Signup and view all the answers

In silico modeling and simulation in drug discovery obviate the necessity for empirical validation through in vitro or in vivo experimentation, provided that the algorithms are rigorously validated and accurately parameterized.

<p>False (B)</p> Signup and view all the answers

During the analysis of time-series data obtained from a continuous glucose monitor, your team observes sporadic, high-amplitude signal artifacts inconsistent with known physiological dynamics. List three viable explanations for the source of these signal abnormalities.

<p>Loose sensor connections; compromised bio-interface integrity; and device malfunctions.</p> Signup and view all the answers

During cell culture experiments in tissue engineering, applying mechanical forces is known as ______., while this type of force is necessary to promote cell differentiation. Furthermore, proper culturing requires the appropriate use of a Blank to filter liquids effectively.

<p>mechanotransduction##filter funnel</p> Signup and view all the answers

Match the data visuals to their definitions:

<p>Histogram = This is similar to column graphs except the columns all touch. Line Graph = Line with connected points. Bar Graph = Displays data with horizontal bars. Pie Chart = Show data relationships as parts of whole.</p> Signup and view all the answers

Upon discovering that a critical reagent employed in a multi-center clinical trial is unexpectedly contaminated with a potent, uncharacterized enzyme inhibitor, the investigation should be:

<p>Immediately halt the trial, notify relevant regulatory agencies, and conduct a thorough re-evaluation. (D)</p> Signup and view all the answers

What is the MOST CRITICAL reason for meticulous and exhaustive background research prior to formulating a testable hypothesis and designing a controlled experiment?

<p>To ensure the utilization of appropriate and validated methodologies, thereby preventing the propagation of erroneous findings and facilitating the generation of generalizable results across diverse contexts. (C)</p> Signup and view all the answers

Is it ethically permissible to initiate research involving human subjects based solely on preliminary evidence, without undergoing rigorous peer review and ethical approval from a properly constituted ethics committee?

<p>False (B)</p> Signup and view all the answers

Articulate the mechanistic rationale underpinning the differential rates of heat dissipation observed between identical volumes of coffee, one augmented with milk at $t=0$ and the other at $t=t_x$, considering the concomitant convective and evaporative heat transfer phenomena.

<p>Adding milk later maintains a higher initial temperature gradient driving evaporative and convective losses, while adding milk initially lowers the overall temperature, reducing these losses.</p> Signup and view all the answers

In the context of experimental design, the rigorous application of ______ controls serves to attenuate the confounding influence of extraneous variables, thereby bolstering the internal validity of the study.

<p>negative</p> Signup and view all the answers

Match the following statistical methods with their respective applications in mitigating confounding variables and enhancing causal inference:

<p>Regression analysis = Quantifies the association between predictor and outcome while controlling for confounders. Propensity score matching = Balances observed covariates between treatment groups based on estimated probabilities of treatment assignment. Instrumental variables = Estimates causal effects in the presence of unmeasured confounding by leveraging exogenous instruments. Mediation analysis = Unravels the pathways and mechanisms through which an exposure exerts its effects on an outcome.</p> Signup and view all the answers

When should deviation from accepted scientific protocols occur?

<p>Only after thorough risk assessment and with appropriate ethical and safety approvals. (A)</p> Signup and view all the answers

Is direct sensory perception via gustation an acceptable method for ascertaining the chemical composition of an unknown laboratory reagent?

<p>False (B)</p> Signup and view all the answers

Describe the implications of violating Fick's First Law of Diffusion in the context of experimental manipulations involving solute concentrations and membrane permeability evaluations.

<p>Violating Fick's Law introduces inaccuracies in quantifying flux rates and predicting equilibrium states, thereby compromising the validity of permeability assessments and necessitating recalibration or alternative analytical approaches.</p> Signup and view all the answers

In the realm of signal transduction research, employing CRISPR-mediated gene editing to generate stable cell lines harboring loss-of-function mutations in specific kinase isoforms serves as a potent strategy for elucidating ______ relationships with downstream signaling cascades.

<p>cause-and-effect</p> Signup and view all the answers

Match each type of graph with its most appropriate use in data presentation:

<p>Pie Chart = Displaying proportions of a whole Bar Graph = Comparing discrete categories Line Graph = Showing trends over continuous intervals Scatter Plot = Illustrating correlations between two variables</p> Signup and view all the answers

What is the most critical rationale for applying statistical transformations, such as Box-Cox or Yeo-Johnson, to non-normally distributed experimental data prior to parametric analysis?

<p>To satisfy the assumptions of parametric statistical tests, thus mitigating Type I and Type II error rates and ensuring the validity of inferential conclusions. (A)</p> Signup and view all the answers

Is it justifiable to extrapolate experimental results substantially beyond the empirical range of acquired data without implementing rigorous validation checks and acknowledging associated uncertainties?

<p>False (B)</p> Signup and view all the answers

Explain the implications of heteroscedasticity in regression analysis and detail a robust approach to address it, ensuring unbiased parameter estimation and valid statistical inference.

<p>Heteroscedasticity violates ordinary least squares assumptions, causing inefficient and biased estimates. Employ White's robust standard errors or weighted least squares regression, incorporating variance function modeling, to rectify these issues.</p> Signup and view all the answers

In the context of microbial culturing, the utilization of selective media, supplemented with specific antibiotics or inhibitory compounds, serves to facilitate the enrichment and isolation of ______ microbial populations, while simultaneously suppressing the proliferation of non-target species.

<p>fastidious</p> Signup and view all the answers

Match each term with the description it best fits. Note, that you must use each option at least once.

<p>Logbook = A comprehensive, dated record of all work toward an investigation. Hypothesis = A testable guess about the outcome of an experiment. Control Variables = Factors kept constant during an experiment Data Logger = Scientific instrument that automatically records data over time.</p> Signup and view all the answers

In the construction of a theoretical model to simulate complex biochemical pathways, what represents the MOST consequential consideration to ensure fidelity and predictive power?

<p>The rigorous implementation of sensitivity analysis to identify critical parameters governing model behavior, enabling targeted refinement and validation efforts. (C)</p> Signup and view all the answers

Assuming all confounding factors are meticulously controlled, does a statistically significant correlation unequivocally establish causation between the independent and dependent variables?

<p>False (B)</p> Signup and view all the answers

Distinguish between internal and external validity in experimental research, and delineate methodologies to fortify both aspects to enable robust and generalizable conclusions.

<p>Internal validity confirms cause-effect within study scope; bolster via controls, randomization, blinding. External validity allows generalizing; enhance it via varied pops, settings and replication studies.</p> Signup and view all the answers

In the context of scientific publication ethics, the deliberate act of selectively reporting positive results while omitting negative or inconclusive findings, thereby skewing the evidential landscape, constitutes a form of ______ bias.

<p>publication</p> Signup and view all the answers

Match each scientist with their area of achievement. Options are to be used once:

<p>Isaac Newton = Laws of Gravitation Albert Einstein = Theory of relativity Marie Curie = Discovery of radium and polonium Louis Pasteur = Germ theory of disease and vaccines</p> Signup and view all the answers

Flashcards

What is a hypothesis?

A sensible guess about the outcome of an experiment.

What is qualitative data?

Data that is expressed in words and is descriptive.

What is quantitative data?

Data that is numerical and can be precisely measured.

What is a pie chart?

A circle divided into sections representing parts of a whole.

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What is a column/bar graph?

A graph with columns or bars representing each piece of data.

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What is a data logger?

Instrument that records data with a sensor.

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What is an independent variable?

The variable a scientist changes in an experiment.

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What is the dependent variable?

The variable that is measured in an experiment.

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What are variables?

Quantities or conditions that can change in an experiment.

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What is a fair test?

A method determining an answer without a favored outcome.

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What does corrosive mean?

Describes a chemical that can cause damage to surfaces.

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What does flammable mean?

Describes easily ignited substances.

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What does toxic mean?

Describes chemicals dangerous to touch, inhale or swallow.

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What is precision?

The degree to which repeated measurements produce the same result.

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What is accuracy?

How close an experimental measurement is to a known value.

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What does calibrate mean?

Checking or adjusting a measuring instrument for accurate results.

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What is a period?

The time taken for one complete swing of a pendulum.

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What is a pendulum?

An object swinging on the end of a string, chain, or rod.

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What is an oscillation?

A complete to-and-fro motion/cycle.

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What is interpolation?

Explain a situation using current information.

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What is extrapolation?

Explain a situation and guess the outcome based upon past data.

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What is a data logger?

Collects and stores data from connected sensors.

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How to collect data effectively?

Use a data logger.

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What is biology?

The scientific study of life.

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What is environmental science?

Study how the world relates to nature.

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What to think as scientist?

How to design a investigation.

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How to record and research?

Using a book as what you do.

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Study Notes

Investigating Science Overview

  • Science uses problem-solving and explores questions through investigations.
  • Skills like observing, measuring, data presentation, and conclusion-forming are used in scientific investigations.

Investigating Skills

  • Conducting experiments in a laboratory needs careful, safe practices, including adherence to rules.
  • Always follow teacher's instructions
  • Always wear safety glasses and a lab coat/apron,
  • Always tie back long hair when handling substances.
  • Never enter the lab without permission, run, eat, or taste chemicals
  • Use equipment safely, pouring with funnels and avoiding open flames near holders.
  • Use gloves and safety glasses when using corrosive chemicals to prevent damage to skin and eyes.
  • Flammable substances need to be kept away from flames to prevent fires.
  • Toxic substances can cause serious harm if swallowed or touched.
  • A Bunsen burner heats with a mix of air and gas, ensuring hair is tied back and safety glasses are worn.
  • Use gauze mats with Bunsen burners
  • Beakers and evaporating dishes can be placed straight onto a gauze mat for heating.
  • Pour liquids carefully into test tubes, using a filter funnel from bottles without a lip
  • Electrical safety in labs includes keeping areas dry and using equipment with intact cords.
  • Precision indicates the consistency of measurements
  • Accuracy refers to how close results are to the true value, achieved through careful instrument use and calibration.

Planning Your Own Investigation

  • Investigations start by scientists asking questions.
  • Select a point of interest.
  • Refine your research question.
  • Your investigations should have a clear and realistic aim that is specific.
  • A hypothesis is a guess concerning the outcome of an experiment, based on data and testable.
  • Ethical considerations are essential; investigations should neither harm humans or animals.
  • Group work shares task, leveraging different skills; clear roles ensure effective teamwork.

Record Keeping and Research

  • Maintain a logbook, like a diary with dated entries, to record your investigation details.
  • A logbook includes timeline, experiment plans, observations, results and presentation preparation.
  • Use notes in your logbook for experimental setup, result understanding and report context.
  • For websites, check the URL for reliability (.edu, .gov, .org endings)
  • Find author information, update dates, and compare information across sources to assess web page reliability.
  • Libraries contain a huge amount of scientific information
  • Access information on topics through non-fiction and reference books, journals, digital files, and audiovisuals.
  • Information beyond libraries includes teachers, government agencies, industries, and relatives.

Controlling Variables

  • Investigations control variables.
  • A pendulum's oscillation is one complete swing, with a period defined by the time taken.
  • Factors like length, mass, and release height can be variables affecting a pendulum's period.
  • The measured variable is the dependent variable, the investigated one is the independent variable
  • Fair tests alter independent variable and control others.

Scientific Reports

  • Formal scientific reports must be approved.
  • Scientific reports include:
  • A precise title.
  • The aim .
  • A hypothesis.
  • An outline of method, equipment, and resources.
  • A science report details experiments and records observations.
  • Reports must present an abstract, introduction, aim, hypothesis, methods, results summary, discussion of findings and a conclusion.
  • Reports need an in-depth bibliography.

Presenting Your Data

  • Qualitative data is descriptive while quantitative data is numerical.
  • Data includes ordinal, numerical, continuous, and discrete types.
  • Tables effectively organize and display qualitative or quantitative data.
  • Graphs, including pie charts, bar graphs, histograms, and line graphs, visually present data.
  • Line graphs, with labeled axes, show relationships and trends.
  • Interpolation estimates data within known values.
  • Extrapolation projects data beyond measured values, though less reliably.

Using Data Loggers

  • A data logger is an instrument that uses sensors to record data automatically
  • Data loggers store large amounts of data automatically
  • Data is transferred to computers for analysis.
  • Data loggers automatically measure temperature, light and sound

Famous Scientists

  • Sir Isaac Newton's laws of gravitation and motion transformed our understanding of physics.
  • Albert Einstein's theories of relativity and mass-energy equivalence significantly changed physics.
  • Louis Pasteur's germ theory led to vaccines and pasteurization, saving countless lives.
  • Marie Curie worked on radioactivity and discovered radium and Polonium.

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