Introduction to Viruses (Part 2)

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Questions and Answers

What is the final step in the assembly process of enveloped viruses?

  • Replication within the cytoplasm
  • Incorporation of host proteins
  • Acquisition of an envelope by budding from cell membranes (correct)
  • Fusion with host cell DNA

Which of the following viruses is known to be non-cytopathic and associated with persistent infections?

  • Paramyxovirus
  • Togavirus
  • Rhabdovirus
  • Coronaviruses (correct)

Where do flaviviruses acquire their envelopes during assembly?

  • From host cell mitochondria
  • Through the membranes of the RER or Golgi apparatus (correct)
  • From the cell nucleus
  • Directly from the plasma membrane

How do herpesviruses release virions from the cell?

<p>By exocytosis or cytolysis (B)</p> Signup and view all the answers

What type of genetic material do rhabdoviruses possess?

<p>Single-stranded RNA (D)</p> Signup and view all the answers

What occurs when a fluid sample containing a virus is placed in a well of agar opposite a well containing antiserum?

<p>A line of precipitate forms if the sample contains viral antigen (C)</p> Signup and view all the answers

Which virus families are primarily associated with the hemagglutination phenomenon?

<p>Orthomyxoviridae and Paramyxoviridae (B)</p> Signup and view all the answers

What is the primary purpose of the polymerase chain reaction (PCR)?

<p>To amplify a specific nucleic acid sequence (B)</p> Signup and view all the answers

Which of the following is NOT a method of diagnostic serology?

<p>Gel electrophoresis (D)</p> Signup and view all the answers

What term describes the binding of erythrocytes to cells infected with hemagglutinating viruses?

<p>Hemadsorption (A)</p> Signup and view all the answers

What is a virion?

<p>A fully assembled infective virus (A)</p> Signup and view all the answers

What characterizes the capsid of vertebrate viruses?

<p>It encloses the genome of the virus (B)</p> Signup and view all the answers

Which type of capsid symmetry is NOT mentioned?

<p>Geometric (C)</p> Signup and view all the answers

What role do glycoproteins play in viral envelopes?

<p>Facilitating binding to host cell receptors (D)</p> Signup and view all the answers

Which statement best describes capsomeres?

<p>They describe protrusions on virus particles (A)</p> Signup and view all the answers

What is a key factor during the attachment phase of viral replication?

<p>The presence of specific receptor molecules (B)</p> Signup and view all the answers

What is the primary environment where viruses replicate?

<p>Within host cells (C)</p> Signup and view all the answers

How long can the duration of a viral replication cycle range?

<p>6 to 40 hours (A)</p> Signup and view all the answers

What role does viral neuraminidase play in some viruses?

<p>Mediates the detachment and adsorption of virions (A)</p> Signup and view all the answers

What is the energy dependency of virus uptake into a host cell?

<p>It is an energy-dependent process (B)</p> Signup and view all the answers

During which process is the viral genome released for transcription?

<p>Uncoating (C)</p> Signup and view all the answers

Where does the synthesis of viral mRNA typically occur for DNA viruses that replicate in the nucleus?

<p>Using host cell transcriptases (D)</p> Signup and view all the answers

Which proteins are synthesized on membrane-bound ribosomes?

<p>Membrane proteins and glycoproteins (B)</p> Signup and view all the answers

What happens during the post-translational modification of viral proteins?

<p>Sugar side-chains are added to proteins (D)</p> Signup and view all the answers

How are non-enveloped viruses typically released from the host cell?

<p>By cellular disintegration (B)</p> Signup and view all the answers

Where does assembly occur for Picornaviruses and Reoviruses?

<p>In the cytoplasm (B)</p> Signup and view all the answers

How do enveloped viruses such as poxviruses release their virions?

<p>By fusion with the plasma membrane and loss of an outer layer (D)</p> Signup and view all the answers

What is a key characteristic of the assembly and release process of poxviruses?

<p>It is a complex process that takes several hours (B)</p> Signup and view all the answers

Which sample collection method is suitable for diagnosing respiratory viral diseases?

<p>Oropharynx or nasopharyngeal aspirates (D)</p> Signup and view all the answers

What is the purpose of the buffered isotonic saline with bovine albumin in sample transport?

<p>To maintain the viability of virus particles during transport (A)</p> Signup and view all the answers

What is a limitation of using electron microscopy for virus detection?

<p>It requires a large number of viral particles to be present (C)</p> Signup and view all the answers

What laboratory technique can be used to demonstrate the presence of viral antigens in specimens?

<p>Immunofluorescence and immunohistochemistry (B)</p> Signup and view all the answers

Why is it critical to collect samples for virus isolation and send them without delay?

<p>To avoid degradation of the virus during transport (C)</p> Signup and view all the answers

What is usually required before a virus becomes adapted to a particular cell line in culture?

<p>A number of blind passages (B)</p> Signup and view all the answers

Flashcards

Virion

A fully assembled, infective virus particle containing a nucleoprotein core.

Capsid

The protein shell that encloses the viral genome in vertebrate viruses.

Nucleocapsid

Describes the capsid along with the viral genome packaged inside.

Envelope

A lipid bilayer membrane that surrounds the nucleocapsid of some viruses. Acquired during budding from a host cell.

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Capsomere

Protein subunits that make up the capsid of a virus.

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Baltimore Classification

A classification system for viruses based on their genome type and how they produce messenger RNA.

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Viral Replication

The process by which viruses replicate inside host cells, using the host's resources.

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Attachment

The initial step of viral infection where the virus attaches to a specific receptor on the host cell.

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Enveloped Virus Budding

Enveloped viruses acquire their outer membrane by budding from a cell membrane. This process involves modification of the membrane with virus-specific transmembrane glycoproteins before budding.

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Cytolytic Enveloped Viruses

Some enveloped viruses, like togaviruses, paramyxoviruses, and rhabdoviruses, can cause cell death (cytolysis) as they bud.

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Intracellular Envelopment

Flaviviruses, coronaviruses, arteriviruses, and bunyaviruses acquire their envelopes within the cell itself, budding through the RER or Golgi apparatus and then being transported to the cell surface for release.

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Herpesvirus Release

Herpesviruses replicate in the nucleus, bud through the nuclear membrane, and accumulate in the space between the inner and outer nuclear membranes, ER cisternae, and cytoplasmic vesicles. Release occurs through exocytosis or cell lysis.

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Rhabdovirus

A rhabdovirus is an enveloped virus with a single-stranded RNA genome.

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Immunodiffusion

A technique where fluids containing virus samples and antiserum are placed in separate wells in agar. If the sample contains viral antigens, a line of precipitate forms as the fluids diffuse.

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Hemagglutination

A procedure where viruses like influenza and measles bind to red blood cells causing them to clump together.

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Hemadsorption

A technique used to detect the presence of viruses by observing the binding of red blood cells to cells infected with hemagglutinating viruses.

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Polymerase Chain Reaction (PCR)

A laboratory method that amplifies specific DNA sequences using a heat-stable DNA polymerase and primers.

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Diagnostic Serology

A group of laboratory tests used to detect antibodies or antigens in blood serum.

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Viral entry via fusion

The process where an enveloped virus fuses its membrane with the cell membrane, allowing the viral genome to enter the cell.

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Viral attachment protein

The part of the virus that attaches to the cell's surface, initiating the infection process.

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Viral detachment by neuraminidase

The viral enzyme neuraminidase helps detach viruses from host cells, allowing them to spread to other cells.

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Uncoating of the viral genome

The process by which the virus releases its genetic material into the cell, allowing it to take over the cell's machinery.

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Viral protein synthesis

The synthesis of viral proteins is crucial for the virus to replicate and spread.

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Release of non-enveloped viruses

Non-enveloped viruses are released from infected cells through cell lysis, essentially bursting open the cell.

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Release of enveloped viruses

Enveloped viruses acquire their envelope by budding from the cell membrane, essentially pinching off a piece of the cell's membrane.

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Viral assembly

The process of assembling new virus particles from newly synthesized viral components.

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Assembly and Release of Enveloped Viruses (Poxviruses)

A complex process involving the assembly of viral particles, their movement through the cell, and the acquisition of a double membrane envelope from the trans-Golgi network.

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Release Mechanism of Enveloped Viruses (Poxviruses)

The process by which viral particles are released from the cell by fusing with the plasma membrane, shedding the outer layer of the double membrane and escaping into the extracellular environment.

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Laboratory Diagnosis of Viral Infections - Initial Steps

The process of analyzing clinical signs, postmortem findings, and histopathological changes to identify viral diseases.

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Surveillance in Viral Disease Diagnosis

Systematic monitoring for the presence and spread of viral diseases within a population or location. This involves collecting data and implementing control measures to prevent outbreaks.

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Laboratory Procedures in Viral Diagnosis

Procedures used to identify and confirm the presence of a specific virus. These procedures may involve isolating the virus, detecting viral antigens or nucleic acids, or performing other tests.

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Oropharynx or Nasopharyngeal Aspirates

Samples collected from the throat to identify respiratory viruses.

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Feces Samples for Viral Diagnosis

Samples collected from feces to identify enteric viruses.

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Buffy Coat Cells (Viraemia)

Samples collected from the blood to identify viruses circulating in the bloodstream.

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Study Notes

Introduction to Viruses (Part 2)

  • This presentation discusses viruses and their components, structure, and replication process.

Virion Structure

  • A virion is a fully assembled infectious virus.
  • The fundamental component is a nucleoprotein core with the ability to infect and replicate within host cells, ensuring continued survival.
  • A virion possesses a lipid envelope that is composed of a lipid bilayer plus associated glycoproteins.

Capsid

  • The capsid is a protein shell that encloses the genome of vertebrate viruses.
  • The nucleocapsid describes the packaged form of the genome in the capsid.
  • Two types of capsid symmetry:
    • Icosahedral symmetry
    • Helical symmetry

Viral Structure

  • Viruses have a capsid (protein sheath), a DNA/RNA genome, and an envelope (protein).
  • Bacteriophage, Tobacco mosaic virus (TMV), and Human immunodeficiency virus (HIV) are examples of viruses.

Envelope

  • In many viruses, the nucleocapsid is covered by an envelope comprised of a lipid bilayer and associated glycoproteins.
  • The glycoproteins are essential for binding host cell receptors, membrane fusion, uncoating of the virion, and destruction of receptors on host cells.
  • The envelope is acquired when the nucleocapsid buds through the cellular membrane.

Epitopes

  • Epitopes on envelope glycoproteins are vital for inducing protective immune responses in infected animals.

Baltimore Classifications

  • Classify viruses based on genome nature and mRNA synthesis pathways.
  • There are 7/6 classes.

Virus Replication Stages

  • Attachment to receptor on host cell
  • Entry into the host cell (endocytosis or membrane fusion)
  • Uncoating (release of viral genome)
  • Replication of viral nucleic acid and protein synthesis
  • Assembly of new virions
  • Release from host cell (budding or cell lysis)

Attachment

  • Virus-cell interaction is crucial for host range and tissue tropism.
  • Some viruses use multiple ligands to bind several cell surface receptors.
  • Virion detachment and re-adsorption to different cells occurs in some viruses, often mediated by viral neuraminidase enzyme (that destroys receptors on cells).

Entry into the Cell

  • Virus uptake/penetration is an energy-dependent process.
  • Mechanisms include receptor-mediated endocytosis and fusion of viral envelope with the plasma membrane.

Uncoating

  • The process where the viral genome is released in a form suitable for transcription.
  • Enveloped viruses commonly shed nucleocapsid directly into the cytoplasm, skipping complete uncoating.
  • Nuclei-replicating viruses may uncoat within the nuclear pore complex.

Synthesis of Viral Proteins

  • Viral protein synthesis is essential for virus replication.
  • DNA viruses often leverage host cell transcriptases for mRNA synthesis.
  • The synthesis is driven by the viral genome.
  • Some viruses produce their own specific enzymes for mRNA synthesis.

Protein Synthesis

  • Membrane proteins and glycoproteins are synthesized by membrane-bound ribosomes.
  • Other soluble proteins, like enzymes, are produced by cytoplasm-free ribosomes.
  • Post-translational modifications are also critical (cleaving, phosphorylation, and glycosylation).

Assembly of Virions

  • Assembled virions differentiate in their structure.
  • Non-enveloped viruses typically have an icosahedral structure.
  • Assemble at the periphery of the cell.
  • Budding is associated with release in enveloped viruses.
  • Viral assembly locations vary depending on the virus (e.g cytoplasm for some, nucleus for others).

Release of Virions

  • Release type varies based on viral structure (enveloped vs. non-enveloped).
  • Enveloped viruses release new virions via budding. Non-enveloped viruses frequently release viruses after the cell disintegrates.
  • Cell lysis is associated with release from some viruses, budding from others.

Laboratory Diagnosis of Viral Infections

  • Diagnostics often are based on clinical signs, post-mortem findings, and histopathological changes from infected tissues.
  • Proper sample collection method is crucial for analysis, followed by appropriate techniques (e.g., cell culture, electron microscopy, immunoassay, PCR, etc.).

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