Hallmarks of Aging and Genomic Instability

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Questions and Answers

Which of the following is NOT one of the three criteria that a hallmark of aging should ideally fulfill?

  • It should be observable during normal aging
  • It should increase healthy lifespan
  • Its experimental aggravation should not affect aging (correct)
  • Its experimental amelioration should retard aging

The accumulation of cellular damage is considered a general cause of aging.

True (A)

What is meant by 'genomic instability' in the context of aging?

Genomic instability refers to the accumulation of genetic damage throughout life that contributes to aging.

A major research target for aging-associated mutations is __________.

<p>mitochondrial DNA (mtDNA)</p> Signup and view all the answers

Match the hallmarks of aging with their descriptions:

<p>Genomic instability = Accumulation of genetic damage Telomere shortening = Loss of protective structures at the ends of chromosomes Mitochondrial dysfunction = Decline in energy production and increase in reactive oxygen species Cellular senescence = State of cell cycle arrest that contributes to aging</p> Signup and view all the answers

Which hallmark of aging refers specifically to damage caused by decreased functionality of DNA repair mechanisms?

<p>Genomic instability (A)</p> Signup and view all the answers

What is the most challenging criterion to achieve among the hallmarks of aging?

<p>To experimentally ameliorate the hallmark to retard normal aging and increase healthy lifespan.</p> Signup and view all the answers

Which of the following are considered physiological sources of cellular damage that contribute to aging?

<p>DNA replication errors (B), Reactive oxygen species (D)</p> Signup and view all the answers

Laminopathies result from mutations in genes coding for nuclear lamins, leading to enhanced genomic stability.

<p>False (B)</p> Signup and view all the answers

What is the role of telomeres in cellular aging?

<p>Telomeres protect the ends of chromosomes from deterioration and are susceptible to age-related deterioration.</p> Signup and view all the answers

Deficiencies in _________ mechanisms can lead to accelerated aging.

<p>DNA repair</p> Signup and view all the answers

Match the following concepts with their definitions:

<p>Genomic instability = Accrual of genetic damage leading to frequent mutations Telomere attrition = Deterioration of chromosome ends with age Laminopathies = Mutations in genes coding for nuclear structural proteins Shelterin = Proteins protecting telomeres from degradation</p> Signup and view all the answers

What is the primary reason why we age and develop certain age-related diseases?

<p>Loss of proteostasis (C)</p> Signup and view all the answers

The activity of the insulin and insulin-like growth factor (IIS) pathway increases with age.

<p>False (B)</p> Signup and view all the answers

What gene mutation is associated with increased risk of Alzheimer's disease?

<p>APOE4 mutation</p> Signup and view all the answers

The protein group associated with insulin-like growth factor 1 is primarily made by the ______.

<p>liver</p> Signup and view all the answers

Match the following pathways with their primary functions:

<p>IGF-1 = Glucose sensing mTOR = Regulates anabolic metabolism IIS = Negative feedback on growth hormone catabolism = Breaking down old parts</p> Signup and view all the answers

What is the role of the mTOR pathway?

<p>It regulates anabolic metabolism. (A)</p> Signup and view all the answers

Unwanted/misfolded proteins are always broken down by the cellular machinery.

<p>False (B)</p> Signup and view all the answers

What paradox is associated with the IIS pathway regarding aging?

<p>Turning its activity down results in longer life.</p> Signup and view all the answers

The mTORC1 and mTORC2 are examples of ______ complexes.

<p>kinase</p> Signup and view all the answers

What is the primary process by which damaged mitochondria are removed from cells?

<p>Mitophagy (B)</p> Signup and view all the answers

NAD+ levels increase as the aging process progresses.

<p>False (B)</p> Signup and view all the answers

What do senescent cells secrete that contributes to aging?

<p>Pro-inflammatory cytokines, chemokines, and extracellular matrix proteases</p> Signup and view all the answers

The accumulation of death-resistant cells due to a weakened immune system leads to __________.

<p>chronic inflammation</p> Signup and view all the answers

Match the following terms with their descriptions:

<p>Mitochondrial dysfunction = Decreased energy production and increased ROS Cellular senescence = State of aging cells that resist death SASP = Secretory phenotype contributing to inflammation Stem cell exhaustion = Reduced ability of stem cells to differentiate</p> Signup and view all the answers

What term describes the process of programmed cell death that removes damaged cells?

<p>Apoptosis (D)</p> Signup and view all the answers

Stem cells have limited ability to change their epigenetic settings compared to normal cells.

<p>False (B)</p> Signup and view all the answers

Name one negative effect of stem cell exhaustion.

<p>Immunosuppression, muscle loss, frailty, or weakening of bones</p> Signup and view all the answers

ROS damage mitochondrial DNA by affecting the proteins that control the production of __________.

<p>mitochondria</p> Signup and view all the answers

Which of the following is NOT a consequence of increasing cellular senescence?

<p>Increased energy production (C)</p> Signup and view all the answers

What is a significant result of stem cell exhaustion as we age?

<p>Contributes to chronic diseases (C)</p> Signup and view all the answers

Induced pluripotent stem cells (iPSCs) can be created from early-stage embryos.

<p>False (B)</p> Signup and view all the answers

Who was awarded the Nobel Prize for the discovery of iPSCs?

<p>Shinya Yamanaka</p> Signup and view all the answers

The process of increasing inflammation as a hallmark of aging is referred to as __________.

<p>inflammaging</p> Signup and view all the answers

Which of the following is a consequence of increased NF-kB activity in aging?

<p>Harmful consequences for cell activity (D)</p> Signup and view all the answers

The signaling environment in the aging body tends to become less inflammatory.

<p>False (B)</p> Signup and view all the answers

What does NF-kB regulate?

<p>Production of proteins, enzymes, and local signals</p> Signup and view all the answers

The hallmarks of aging include phenomena that occur in __________ aging.

<p>normal</p> Signup and view all the answers

What is one of the criteria for identifying the hallmarks of aging?

<p>Experimental aggravation accelerates aging (C)</p> Signup and view all the answers

Flashcards

Genomic Instability

The gradual build-up of genetic errors in the DNA within a cell over time.

Mitochondrial DNA (mtDNA) Damage

A key contributor to aging, caused by the accumulation of mutations in the DNA within mitochondria, the powerhouses of our cells.

DNA Repair Mechanisms

Mechanisms that help repair damaged DNA within the cell.

Nuclear Lamina

A protective structure that helps to maintain the shape and integrity of the nucleus of a cell. Damage to this structure can accelerate aging.

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Telomeres

The ends of chromosomes that protect genetic information. They shorten with each cell division, contributing to aging.

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Stress Pathways Activated by Nuclear Lamina Damage

Stress pathways triggered by damage to the nuclear lamina, leading to a faster aging process.

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Laminopathies

A group of genetic disorders characterized by premature aging, often caused by mutations affecting the nuclear lamina.

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Proteostasis

The ideal state where cells maintain a stable production of correctly folded proteins, without defects.

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How does proteostasis relate to aging?

The loss of proteostasis, which occurs due to the accumulation of errors in protein production over time, is a key driver of aging and age-related diseases.

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Why are protein clumps difficult to remove?

Clumps of misfolded proteins protect their interior from being broken down by cellular machinery, preventing them from being recycled.

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APOE4 mutation

A gene mutation that contributes to fragile protein production and a higher risk of developing Alzheimer's disease.

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Nutrient Sensing Pathways

Metabolic processes regulated by nutrient levels, influencing aging.

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IGF-1 (Insulin-like Growth Factor 1)

A protein primarily produced by the liver in response to growth hormone, involved in glucose sensing and forming a negative feedback loop with growth hormone.

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IIS (Insulin and Insulin-like Growth Factor) pathway

The pathway involving IGF-1 and insulin, which plays a role in glucose sensing and metabolism.

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IIS pathway Paradox

The paradox of the IIS pathway – while decreasing its activity is linked to longer lifespan, the pathway's activity actually decreases with age, potentially as a survival mechanism.

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What happens when DNA repair mechanisms are deficient?

The process of DNA repair mechanisms slowing down, causing an increase in genetic errors and accelerating aging.

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What is mitophagy?

A process by which damaged mitochondria are removed from cells, protecting against aging and disease.

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What happens to NAD+ levels as we age?

A decline in the level of NAD+ in the cell, leading to impaired communication between the nucleus and mitochondria, decreased energy production and increased ROS production.

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What is cellular senescence?

A state where cells stop dividing and become inactive, contributing to aging and age-related diseases.

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What is SASP?

A collection of pro-inflammatory signals released by senescent cells, contributing to aging and cancer.

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What is stem cell potency?

The ability of stem cells to differentiate into various cell types in the body, declining with age.

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What is stem cell exhaustion?

A decrease in the number and function of stem cells in the body, contributing to age-related decline.

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How do ROS affect mitochondrial DNA?

Damaged mitochondria can indirectly cause mutations in their own DNA by impacting the proteins involved in their reproduction and copying process.

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What is the difference between apoptosis and senescence?

Apoptosis is a programmed cell death process that removes damaged cells, while senescent cells escape this process, accumulating in tissues.

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How does the immune system contribute to senescence?

The immune system becomes weaker with age, leading to the accumulation of senescent cells.

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How do senescent cells contribute to aging?

Senescent cells contribute to aging and cancer by releasing inflammatory substances that damage surrounding tissues and cells.

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Stem Cell Exhaustion

The pool of stem cells in our body regenerates but with lower quality and speed over time, contributing to chronic diseases.

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Induced Pluripotent Stem Cells (iPSCs)

Stem cells from early-stage embryos were initially used, but now adult cells can be reprogrammed into stem cells, called induced pluripotent stem cells (iPSCs).

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Yamanaka Factors

The signaling chemicals that reprogram adult cells into stem cells are called Yamanaka factors, named after Nobel Prize winner Shinya Yamanaka.

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Altered Intercellular Communication

Changes in cell-to-cell communication, primarily due to increased inflammation, contribute to aging and disease.

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Inflammaging

Inflammation across the body that grows with time, leading to increased activation of a chemical called NF-kB.

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Nuclear Factor kappa-light-chain-enhancer of activated B cells (NF-kB)

NF-kB is a protein complex that regulates the production of proteins, enzymes, and local signals (cytokines), playing a key role in cellular responses to stress, inflammation, and other stimuli.

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Effects of NF-kB Increase

The increased activity of NF-kB can cause harmful consequences as it is a master regulator of cell activity.

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Cellular Senescence and Altered Intercellular Communication

Cellular senescence, another hallmark of aging, is closely linked to altered intercellular communication and may be targeted for its treatment.

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Hallmarks of Aging

Aging is a complex process involving various changes, and addressing these changes may help slow down aging.

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Targeting Hallmarks of Aging

Research on aging aims to identify and modify these hallmarks to achieve healthy aging and improve overall health.

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Study Notes

Hallmarks of Aging

  • Nine identifiable hallmarks of aging exist, primarily in mammals
  • Each hallmark ideally manifests during normal aging, its exacerbation accelerates aging, and its amelioration retards aging and increases healthy lifespan.
  • Cellular damage accumulates over time, which is a general cause of aging.

Genomic Instability

  • Accumulation of genetic damage throughout life is a common aspect of aging.
  • Premature aging diseases are often caused by increased DNA damage.
  • Genomic instability happens in two ways: direct lesions/damage and DNA damage.

Direct Lesions/Damage

  • DNA integrity is continually challenged by both exogenous (physical, chemical, biological threats) and endogenous (DNA replication errors, spontaneous hydrolytic reactions, and reactive oxygen species) threats.
  • Damage to DNA includes point mutations, translocations, chromosomal gains and losses, telomere shortening, etc.
  • Damage to essential genes can cause dysfunction, and subsequently cell damage.
  • DNA repair mechanisms compensate for much of the direct damage. Telomere and mitochondrial DNA integrity must also be maintained.

Defects in the Architecture of the Cell Nucleus

  • Nuclear lamins (type A and B) provide a structure for proteins regulating genomic instability.

Telomere Attrition

  • Telomeres protect chromosome ends, are progressively shortened upon cell division.
  • Telomere shortening = limited cell division capacity
  • Telomerase = enzyme ensuring DNA replication at the telomeres, is not expressed in most mammalian cells
  • Shelterin = protein complex preventing DNA repair mechanism from engaging with telomeres
  • Telomere length correlates with lifespan.

Epigenetic Alterations

  • Multiple epigenetic alterations contribute to the aging process.
  • Histone modification variations exist between species.
  • DNA methylation undergoes hypomethylation with age in most areas of the genome.
  • Chromatin remodeling results in changes to chromatin architecture, and related to aging concerns about global loss of heterochromatin.
  • Transcriptional errors and the production of excess mRNA are associated with aging.

Loss of Proteostasis

  • The protein-producing machinery in cells falters and misfolded proteins accumulate.
  • Misfolded proteins form aggregates.
  • In normal circumstances, cells have machinery to break-down misfolded proteins, but aggregates tend to protect these from breakdown in Alzheimer's and Parkinson's.

Deregulated Nutrient Sensing

  • Four important protein groups (IGF-1, mTOR, Sirtuins) influence nutrient sensing with aging.
  • IGF-1 is made in response to growth hormone levels.
  • mTOR regulates anabolic metabolism (creating new tissues/proteins) and is involved in sensing amino acids
  • Sirtuins = a class of proteins, responsive to energy levels.

Cellular Senescence

  • A state in which cells stop dividing, signaling chemicals, and potentially dangerous.
  • Cells can undergo senescence due to replicated damage or excessive mitogenic signals.
  • Senescent cells produce factors that encourage senescence in nearby cells, as well as inflammatory factors.

Stem Cell Exhaustion

  • Stem cells are vital for tissue repair and have a declining capacity to repair tissues.
  • Stem cells are affected by inflammatory factors and become exhausted with age.

Altered Intercellular Communication

  • Inflammatory and age-related changes in chemical signaling between cells can cause issues with the immune system.
  • The SASP (Senescence-Associated Secretory Phenotype) is a factor in altered intercellular communication in relation to inflammatory states.

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