Gene Expression and Regulation Quiz

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Questions and Answers

Which process in prokaryotes primarily regulates gene expression?

  • Replication
  • Translation
  • Processing
  • Transcription (correct)

What occurs when lactose binds to the lac repressor in the bacterial lac operon?

  • The operator binds to the promoter.
  • Lactose prevents transcription.
  • The lac operon is switched on. (correct)
  • The operator binds to the lac genes.

In which cell structure does mRNA processing occur in eukaryotic cells?

  • Cytoplasm
  • Nucleus (correct)
  • Ribosome
  • Endoplasmic reticulum

Which nucleotide sequences are eliminated during mRNA processing?

<p>Introns (A)</p> Signup and view all the answers

What is the primary function of a promoter in genetics?

<p>To signal RNA polymerase to start transcription (A)</p> Signup and view all the answers

What type of mutation results from the deletion of a nucleotide?

<p>Frameshift (D)</p> Signup and view all the answers

Which type of mutation is known to have no effect on an organism's phenotype?

<p>Silent mutation (D)</p> Signup and view all the answers

Which of the following is classified as a mutagen?

<p>UV sunlight (B)</p> Signup and view all the answers

What is the main role of primers during the PCR process?

<p>Provide a starting point for DNA synthesis. (D)</p> Signup and view all the answers

During each PCR cycle, what happens to the number of copies of a DNA segment?

<p>It doubles. (C)</p> Signup and view all the answers

Which phrase is true for a DNA fingerprint?

<p>It cannot distinguish among siblings. (C)</p> Signup and view all the answers

What term describes DNA that contains genes from more than one organism?

<p>Recombinant DNA. (A)</p> Signup and view all the answers

Scientists primarily use PCR to achieve which of the following?

<p>Amplify DNA. (A)</p> Signup and view all the answers

What is the first step of PCR that involves heating the DNA molecule?

<p>To separate the DNA strands. (B)</p> Signup and view all the answers

What is the probability that two people have the same number of repeats at locations A and B if the chances are 1 in 500 for A and 1 in 800 for B?

<p>1 in 13,000. (A)</p> Signup and view all the answers

Which of the following are true examples of clones?

<p>Flowers from one plant. (D)</p> Signup and view all the answers

Which statement is true of all genetically engineered organisms?

<p>They have altered genomes. (A)</p> Signup and view all the answers

Plants that contain recombinant DNA are called what?

<p>Transgenic (B)</p> Signup and view all the answers

What are the two main goals of the Human Genome Project?

<p>Identify all the genes within the genome. (C), Sequence all of the DNA base pairs of the human chromosomes. (D)</p> Signup and view all the answers

Gene sequencing defines the order of which of the following?

<p>DNA nucleotides in genes or genomes. (D)</p> Signup and view all the answers

The study of the proteins that result from an organism’s genome is known as what?

<p>Proteomics (B)</p> Signup and view all the answers

What type of mutation is represented by changing T-G-A-C-C-A to T-G-A-G-C-A?

<p>Substitution (D)</p> Signup and view all the answers

In eukaryotes, which proteins assist RNA polymerase in binding to the regulatory region for transcription?

<p>Transcription factors (A)</p> Signup and view all the answers

What function does a promoter serve in the transcription process?

<p>It allows a gene to be transcribed. (D)</p> Signup and view all the answers

What protein binds to the operator and blocks RNA polymerase?

<p>Repressor (D)</p> Signup and view all the answers

In the lac operon model, under what condition will the genes be expressed?

<p>Lactose is present in the cell (B)</p> Signup and view all the answers

What role do operons play in prokaryotic gene expression?

<p>To regulate gene activity in response to cellular needs (D)</p> Signup and view all the answers

What is the function of the operator in an operon?

<p>It acts as the 'on/off' switch for gene transcription (A)</p> Signup and view all the answers

What is the complete set of genetic material called?

<p>Genome (C)</p> Signup and view all the answers

Which enzyme is used to cut DNA into smaller pieces?

<p>Restriction enzyme (B)</p> Signup and view all the answers

What does gel electrophoresis do?

<p>It separates DNA fragments by size (D)</p> Signup and view all the answers

What type of cell can differentiate into any cell type in the body?

<p>Stem cells (C)</p> Signup and view all the answers

What is bioinformatics primarily concerned with?

<p>The use of computer tools to manage biological data (C)</p> Signup and view all the answers

How do DNA microarrays facilitate the comparison of gene expression?

<p>By providing glowing indicators of active genes (B)</p> Signup and view all the answers

What does proteomics study?

<p>The comparison and functions of proteins (B)</p> Signup and view all the answers

Which suffix is relevant to understanding genomics and proteomics?

<p>-ic (A)</p> Signup and view all the answers

What is a significant benefit of proteomics research?

<p>Analyzing the roles of proteins in disease (C)</p> Signup and view all the answers

How do restriction enzymes determine where to cut DNA?

<p>A specific sequence of nucleotides (B)</p> Signup and view all the answers

What are 'sticky ends' in DNA?

<p>Single-stranded ends (A)</p> Signup and view all the answers

What does GMO stand for?

<p>Genetically Modified Organism (D)</p> Signup and view all the answers

Why do DNA fragments travel away from the negative electrode during gel electrophoresis?

<p>DNA is negatively charged and attracted to the positive end (C)</p> Signup and view all the answers

What is the function of transcription factors in a cell?

<p>They bind to DNA and guide RNA polymerase to gene start points (A)</p> Signup and view all the answers

Which type of mutation affects more genes, a gene mutation or a chromosomal mutation?

<p>Chromosomal mutation (B)</p> Signup and view all the answers

What is a TATA box?

<p>A promoter sequence in eukaryotic cells (C)</p> Signup and view all the answers

For a mutation to be inherited by offspring, where must it occur?

<p>Germ cells (C)</p> Signup and view all the answers

Flashcards

Gene expression regulation

The process of controlling which genes are expressed in a cell.

Operon

A specialized DNA sequence that controls gene expression in prokaryotes, consisting of a promoter, an operator, and a series of genes.

Repressor protein

A protein that binds to the operator region of an operon and blocks RNA polymerase from transcribing the genes.

Promoter

A segment of DNA that binds to RNA polymerase and initiates transcription.

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Mutation

A permanent change in the DNA sequence.

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Frameshift mutation

A mutation that causes a change in the reading frame of a gene, often leading to a nonfunctional protein.

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Restriction enzyme

An enzyme that cuts DNA at specific sequences, often used in genetic engineering.

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Gel electrophoresis

A technique used to separate DNA fragments based on their size.

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Polymerase Chain Reaction (PCR)

A process that uses repeated cycles of heating and cooling to amplify a specific segment of DNA. It involves the use of primers, DNA polymerase, and nucleotides.

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Primers in PCR

Short sequences of DNA that are complementary to the target DNA sequence and act as starting points for DNA synthesis during PCR.

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Denaturation Step in PCR

The first step of PCR where the DNA strands are separated by heating to about 95°C, breaking the hydrogen bonds between them.

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Annealing Step in PCR

The second step of PCR where primers bind to the separated DNA strands at specific locations, marking the beginning of the segment to be copied.

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Extension Step in PCR

The third step of PCR where DNA polymerase extends the primers using nucleotides, building new DNA strands complementary to the template strands.

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DNA Fingerprinting

A technique that creates a unique pattern of DNA fragments based on the variation in the number of short, repeating sequences within a person's DNA.

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Repeat Sequences in DNA Fingerprinting

The number of times a specific DNA sequence repeats within an individual's genome, which varies between individuals.

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Recombinant DNA

DNA that is formed when genes from different organisms are combined, often using techniques like PCR and restriction enzymes.

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Genetically Engineered Organism (GEO)

A genetically engineered organism (GEO) has a modified genome, meaning its DNA has been changed intentionally. This alteration can be adding, removing, or modifying specific genes.

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Transgenic Plants

Transgenic plants are those that have been genetically modified to contain DNA from another organism, often to introduce beneficial traits like pest resistance.

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Human Genome Project

The Human Genome Project, a massive scientific undertaking, aimed to map and sequence the entire human genome. One of its key goals was to identify all the genes within our DNA.

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Gene Sequencing

Gene sequencing is the process of determining the precise order of nucleotides (A, T, C, and G) within a gene or an entire genome. It's like reading a book of DNA, where each letter represents a nucleotide.

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Proteomics

Proteomics focuses on the study of an organism's entire set of proteins. It aims to understand how proteins interact and function within a cell.

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Bioinformatics

Bioinformatics is the use of computer tools and databases to analyze biological data, such as DNA sequences and protein structures. It helps scientists extract meaningful insights from vast biological datasets.

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DNA Microarrays

DNA microarrays are powerful tools that allow researchers to simultaneously study the expression levels of thousands of genes at once. This helps them understand how gene activity differs in different cell types or under different conditions.

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Substitution Mutation

A substitution mutation occurs when a single nucleotide in a DNA sequence is replaced with a different nucleotide. It's like changing one letter in a word.

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How do restriction enzymes "know" where to cut DNA?

The specific sequence of nucleotides that a restriction enzyme recognizes and cuts.

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"Sticky-ends" are DNA strands with:

DNA strands that have single-stranded ends after being cut by a restriction enzyme.

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GMO stands for

A genetically modified organism, a plant or animal whose genetic makeup has been altered through genetic engineering.

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Why do DNA fragments travel away from the negative electrode in gel electrophoresis?

DNA fragments are negatively charged, causing them to move towards the positive electrode during gel electrophoresis.

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The PCR technique was developed by_________

The polymerase chain reaction (PCR) is a molecular biology technique used to amplify DNA sequences, invented by Kary Mullis.

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Why do the cells in your body differ from each other?

The cells in our body differentiate because they express different sets of genes.

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What role do transcription factors play in a cell?

Transcription factors are proteins that bind to DNA and help RNA polymerase identify the start of a gene.

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What is a promoter?

A promoter is a DNA sequence located upstream of a gene that acts as a binding site for RNA polymerase and initiates transcription.

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What is an operon?

A type of DNA sequence in prokaryotes that controls gene expression by regulating the transcription of genes under its control. It includes a promoter, an operator, and a series of structural genes.

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What is a repressor protein?

A protein that binds to the operator region of an operon, preventing RNA polymerase from transcribing the genes. It acts as a gatekeeper, controlling gene expression.

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How does lactose regulate the lac operon?

The lactose molecule binds to the repressor protein, changing its shape and preventing it from binding to the operator. This allows RNA polymerase to transcribe the lac operon genes.

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What are stem cells?

A type of cell that has the potential to differentiate into various specialized cell types in the body. These cells are like blank slates, capable of becoming any cell type needed.

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What is gel electrophoresis?

A technique used to separate DNA fragments based on their size. It utilizes an electric current to move DNA fragments through a gel matrix, with smaller fragments migrating faster than larger ones.

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What is the genome?

The complete set of genetic material in an organism, including all of its genes and non-coding DNA sequences. It's like the complete blueprint of an organism's life.

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What are restriction enzymes?

Enzymes that cut DNA molecules at specific recognition sequences, often used in genetic engineering. They act like molecular scissors, precisely cutting DNA at specific locations.

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What is the role of operons in prokaryote gene expression?

It accounts for the controlled expression of genes in response to cellular needs. Operons ensure that genes are expressed only when required, optimizing resource utilization and preventing wasteful gene expression.

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What is proteomics?

The study of all proteins in an organism, including their functions and interactions.

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What are DNA microarrays?

Microarrays are small chips that allow the study of many genes and their expression at the same time.

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How can DNA microarrays compare gene expression in different cells?

DNA microarrays can be used to compare gene expression in different cells because genes that are being expressed show up as glowing dots on a microarray. The pattern of dots can be compared across different types of cells.

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Why is bioinformatics important for genomics research?

Bioinformatics uses computer databases to organize and analyze biological data, which helps genomics research by providing storage, comparison, and modeling tools for vast genomic information.

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What does the suffix -ic tell us about genomics, proteomics, and bioinformatics?

Genomics is related to all of an organism's DNA, proteomics is related to all of an organism's proteins, and bioinformatics is related to biological information.

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Study Notes

Gene Expression Regulation in Prokaryotes

  • Gene expression in prokaryotes (like bacteria) is controlled primarily through controlling transcription.
  • The lac operon is a common example, where gene expression for lactose metabolism is regulated.
  • The operon is switched on when lactose is present, binding to the lac repressor and allowing transcription of lactose-metabolizing genes.

mRNA Processing in Eukaryotes

  • mRNA processing in eukaryotic cells (like animal cells) occurs in the nucleus.
  • Introns are segments of non-coding DNA removed during mRNA processing, leaving only exons.

Promoter Function

  • A promoter is a DNA sequence that signals the start of a gene.
  • It's where RNA polymerase binds to begin transcription.
  • It doesn't code for enzymes, but indicates where the transcription process should begin.
  • It also doesn't keep the gene permanently off, as that's dependent on other regulatory mechanisms.

Gene Mutations and Cell Types

  • Mutations affecting offspring occur in germ cells.
  • Mutations in other cells (body cells) do not affect offspring.
  • Mutagens (agents that cause mutations) include UV sunlight.

DNA Fragment Separation

  • Gel electrophoresis is a technique used to separate DNA fragments by size.
  • DNA fragments are negatively charged and move towards the positive end of the gel.
  • Small fragments travel faster and farther down the gel than larger fragments.

Polymerase Chain Reaction (PCR)

  • PCR is a technique used to amplify DNA.
  • PCR requires primers, nucleotides, DNA polymerase, and DNA template.
  • Each cycle doubles the number of DNA copies.
  • PCR involves heating to separate DNA strands and cooling to allow primers to bind.

DNA Fingerprinting

  • DNA fingerprinting identifies individuals based on variations in non-coding DNA.
  • The differences are due to variations in the number of short repetitive sequences.
  • These differences are specific for each individual.
  • DNA fingerprinting is useful in forensic science, paternity testing, and crime investigations.
  • DNA fingerprinting can also be useful to identify evolutionary relationships.

Genetic Engineering

  • Scientists use bacteria in genetic engineering because bacteria can contain plasmids.
  • Transgenic organisms contain genes from other organisms and are used for various purposes.
  • Genetically modified organisms (GMOs) can be used in food production.
  • Recombinant DNA is produced when DNA from different organisms is combined.

Proteomics

  • Proteomics studies proteins in an organism.
  • This includes their interactions and functions.
  • Proteomics is useful in medical research.
  • Studying proteins also gives insights into human diseases and evolutionary relationships.

DNA Microarrays

  • Microarrays are used to compare differences in gene expression.
  • Various types of cells are viewed to find which genes are expressed and at what rate.

Gene Regulation

  • Transcription factors bind to DNA to control gene expression.
  • TATA box is a specific sequence that signals where transcription should begin.
  • Exons are gene segments expressed in proteins.
  • Introns are removed from the mRNA molecule during processing.
  • Promoters are DNA sequences that define where transcription of DNA should start.
  • Operons are groups of genes that work together.
  • Gene duplication can lead to unequal crossing over.
  • Translocation is the movement of a segment from one part of a chromosome to another.

UV Light Damage

  • UV light causes thymine dimers, changing the DNA sequence.

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