Gene Expression and Regulation Quiz

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Questions and Answers

What is the role of the 12 protein factors during translation initiation in eukaryotes?

  • Binding to the stop codon
  • Facilitating peptide bond formation
  • Helping in the assembly of the initiation complex (correct)
  • Assisting in the release of tRNAs from the ribosome

During the elongation stage of translation, which site does the amino-acyl tRNA enter first?

  • P site
  • E site
  • A site (correct)
  • None of the above

What happens to the tRNA at the P site during the elongation process?

  • It releases its amino acid to form a peptide bond (correct)
  • It unbinds from the mRNA completely
  • It moves to the E site without releasing the amino acid
  • It is replaced by the new tRNA from the A site

Which of the following factors is responsible for facilitating the shift of tRNAs during the elongation stage in eukaryotes?

<p>eEF2 (B)</p> Signup and view all the answers

What occurs when a stop codon is reached during translation?

<p>Release factors bind to the A-site (C)</p> Signup and view all the answers

Which of the following signals the termination of translation?

<p>The presence of a stop codon (A)</p> Signup and view all the answers

Which ribosomal subunit first joins the initiation complex in eukaryotic translation?

<p>40S (C)</p> Signup and view all the answers

In prokaryotes, what is the equivalent of eEF2 during the elongation process?

<p>EF-G (D)</p> Signup and view all the answers

What role do aminoacyl tRNA synthetases have in the translation process?

<p>They link amino acids to their respective tRNA. (D)</p> Signup and view all the answers

What is the function of the Shine-Dalgarno sequence in prokaryotic translation?

<p>It aligns the mRNA with the ribosomal subunit. (D)</p> Signup and view all the answers

In eukaryotes, which component assists in binding mRNA to the ribosome during translation initiation?

<p>5’ 7-methylguanosine cap (B)</p> Signup and view all the answers

Which factors are involved in the initiation phase of translation in eukaryotes?

<p>eIF1, eIF2, eIF4E (A)</p> Signup and view all the answers

What is the composition of ribosomes?

<p>RNA and proteins (A)</p> Signup and view all the answers

Which of the following amino acids is involved in the initiation of translation in prokaryotes?

<p>Formylmethionine (fMet) (A)</p> Signup and view all the answers

Which of the following is NOT a component required for translation initiation in eukaryotes?

<p>Phospholipids (B)</p> Signup and view all the answers

What is the role of elongation factors during translation?

<p>To add amino acids to the growing polypeptide chain. (C)</p> Signup and view all the answers

During translation termination in prokaryotes, which release factors are involved?

<p>RF-1, RF-2, RF-3 (B)</p> Signup and view all the answers

What is the main function of the 30S ribosomal subunit in prokaryotic translation?

<p>It binds initiator tRNA and mRNA. (B)</p> Signup and view all the answers

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Flashcards

Aminoacyl tRNA

A type of RNA molecule that carries specific amino acids to the ribosome, where they are added to the growing polypeptide chain during translation.

Ribosome

A large complex of RNA and proteins found in the cytoplasm that is responsible for translating mRNA into proteins.

Translation

The process by which genetic information encoded in mRNA is used to create proteins.

Start Codon

The specific three-nucleotide sequence on mRNA that signals where translation should start.

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Stop Codon

The specific three-nucleotide sequence on mRNA that signals the end of protein synthesis.

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Shine-Delgarno sequence

A sequence of nucleotides found in prokaryotic mRNA that aligns with 16S rRNA during translation initiation.

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Initiation factors (IFs)

A type of protein that helps initiate translation in prokaryotes.

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Elongation factors (EFs)

A type of protein that helps elongate the polypeptide chain during translation in prokaryotes.

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Release factors (RFs)

A type of protein that helps terminate translation in prokaryotes.

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30S initiation complex

A complex structure formed during translation initiation in prokaryotes, consisting of the 30S ribosomal subunit, the mRNA, and the initiator tRNA.

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What is the role of the start codon AUG in translation?

The start codon AUG signals the beginning of translation, where the ribosome assembles on the mRNA and the first amino acid (methionine) is attached.

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What are the key components required for translation initiation in eukaryotes?

In eukaryotes, translation initiation requires mRNA, an aminoacyl-tRNA (carrying methionine), ribosome, GTP (energy), and various protein factors.

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What are the three tRNA binding sites on the ribosome and their functions?

The ribosome has three tRNA binding sites: P (peptidyl) site holds the growing polypeptide chain, A (aminoacyl) site where the next aminoacyl-tRNA enters, and E (exit) site where the tRNA departs.

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Describe the elongation phase of translation.

Elongation is the process of adding amino acids to the growing polypeptide chain. It involves four steps: 1) tRNA carrying the next amino acid binds to the A site, 2) the amino acid is added to the growing chain, 3) the ribosome shifts, 4) the tRNA exits the E site.

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How does translation termination occur?

Translation termination occurs when a stop codon is reached in the mRNA. There is no tRNA that can bind to a stop codon, so release factors bind to the A-site, triggering polypeptide release and ribosome dissociation.

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What are the functions of eEF1a and eEF2 in eukaryotic translation?

eEF1a (elongation factor 1 alpha) facilitates the binding of aminoacyl-tRNA to the A-site of the ribosome during elongation. eEF2 (elongation factor 2) is involved in the translocation step: shifting the ribosome one codon along the mRNA.

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How is translation initiation similar and different in prokaryotes and eukaryotes?

In prokaryotes, the initiation stage involves mRNA, aminoacyl-tRNA (fMet), ribosome, GTP, and initiation factors. The process is similar in eukaryotes, but the components vary slightly.

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Explain the concept of gene expression regulation.

Gene expression regulation encompasses various mechanisms that control how genetic information is flow from DNA to protein. This regulation can occur at the level of transcription, mRNA processing, translation, and post-translationally, ensuring precise control of protein synthesis.

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Study Notes

Gene Expression and Regulation

  • Gene expression is the process by which information from a gene is used to synthesize a functional gene product, typically a protein.
  • Gene regulation is the process of controlling the expression of genes.
  • Gene regulation is crucial for responding to environmental changes, cell differentiation, and development.

mRNA Processing

  • Pre-mRNA undergoes several processing steps to become mature mRNA:
    • 5' capping: A 7-methylguanosine cap is added to the 5' end for protection and ribosome binding.
    • 3' polyadenylation: A string of adenine nucleotides (poly(A) tail) is added to the 3' end for stability.
    • Splicing: Introns (non-coding regions) are removed, and exons (coding regions) are joined together.
  • mRNA is then exported from the nucleus and transported to the cytoplasm.

Translation

  • Translation is the process of protein synthesis.
  • It involves decoding the mRNA sequence into a polypeptide chain.
  • Ribosomes, tRNAs, and amino-acyl tRNAs are involved in the process.
  • Ribosome has three binding sites (E, P, and A) where tRNAs bind during translation.

Translation Initiation (Prokaryotes)

  • Initiation factors (IF1, IF2, IF3) bind to the 30S subunit.
  • mRNA and initiator methionyl-tRNA (fMet-tRNA) bind to the complex.
  • The 50S subunit joins to form a complete 70S ribosome.

Translation Initiation (Eukaryotes)

  • Eukaryotic mRNAs have a 5' cap that's recognized by initiation factors to bind to 40S subunit.
  • Small ribosomal subunit scans along the mRNA until it reaches the AUG codon.
  • Methionyl tRNA is then attached to create the initiator complex.
  • The large subunit joins to form a 80S ribosome complex.

Translation Elongation

  • Aminoacyl-tRNA binds to the A site.
  • Peptide bond formation between the amino acids on the tRNAs at the P and A sites.
  • The ribosome translocates along the mRNA, shifting the tRNAs from the A and P sites to the E and P sites, respectively.
  • The uncoupled tRNA is released from the E site.

Translation Termination

  • A stop codon is reached on the mRNA.
  • Release factors bind to the A site. -The polypeptide chain is released.
  • Ribosome dissociates.

Components of translational process

  • Amino-acyl tRNA: carries amino acids to the ribosome.
  • Ribosome: translates mRNA into protein.
    • Ribosome large subunit and small subunit.
  • mRNA: carries genetic information from DNA to ribosome
  • GTP: an energy source.
  • Protein factors: help facilitate various steps of translation.

tRNA Structure and Synthesis

  • tRNAs are small RNA molecules with a cloverleaf shape.
  • They have an anticodon that base-pairs with the mRNA codon.
  • tRNAs are aminoacyl-tRNA-synthetase-specific.
  • Transfer of an amino acid to tRNA is catalyzed by aminoacyl-tRNA synthetases.

Ribosome Structure

  • Ribosomes are composed of rRNA and ribosomal proteins.
  • Prokaryotes have 70S ribosomes (50S + 30S subunits).
  • Eukaryotes have 80S ribosomes (60S + 40S subunits).
  • The structure of rRNA is critical for its catalytic function (peptidyl transferase).

Control of Gene Expression

  • Regulation at different levels (transcription, processing, translation).
  • Prokaryotes use operons for transcription regulation.
  • Eukaryotes use chromatin structure and transcription factors to regulate gene expression.
  • Post-transcriptional control can also occur at different stages.

Online resources

  • Useful links to supplementary websites and educational videos for further learning about the topic.

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