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Questions and Answers
What is the net gain of ATP during glycolysis?
What is the net gain of ATP during glycolysis?
Which enzyme catalyzes the first regulatory step of glycolysis?
Which enzyme catalyzes the first regulatory step of glycolysis?
What inhibits the enzyme phosphofructokinase in glycolysis?
What inhibits the enzyme phosphofructokinase in glycolysis?
In which cells is fructose converted to fructose-6-phosphate?
In which cells is fructose converted to fructose-6-phosphate?
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What is the role of 1,3-bisphosphoglycerate in glycolysis?
What is the role of 1,3-bisphosphoglycerate in glycolysis?
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What is a key feature of the regulatory steps in glycolysis?
What is a key feature of the regulatory steps in glycolysis?
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Which compound provides the phosphate group in the formation of ATP during the second half of glycolysis?
Which compound provides the phosphate group in the formation of ATP during the second half of glycolysis?
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Which statement about glycolysis and insulin regulation is true?
Which statement about glycolysis and insulin regulation is true?
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What is formed when acetoacetate undergoes oxidation?
What is formed when acetoacetate undergoes oxidation?
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Which enzyme activates protein digestion in the stomach?
Which enzyme activates protein digestion in the stomach?
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Which of the following is NOT an end product of protein digestion?
Which of the following is NOT an end product of protein digestion?
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What is the primary function of proteins in the body?
What is the primary function of proteins in the body?
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What happens during the process of transamination?
What happens during the process of transamination?
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Which product is formed when acetoacetate goes through decarboxylation?
Which product is formed when acetoacetate goes through decarboxylation?
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During digestion, trypsin is primarily responsible for hydrolyzing which type of molecule?
During digestion, trypsin is primarily responsible for hydrolyzing which type of molecule?
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Which of the following compounds are products of fatty acid digestion?
Which of the following compounds are products of fatty acid digestion?
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What is the primary purpose of catabolic reactions in metabolism?
What is the primary purpose of catabolic reactions in metabolism?
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What characterizes a cyclic metabolic pathway?
What characterizes a cyclic metabolic pathway?
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Which stage of metabolism primarily involves breaking down large molecules to smaller ones?
Which stage of metabolism primarily involves breaking down large molecules to smaller ones?
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Where does the oxidation of small molecules occur in the process of energy production?
Where does the oxidation of small molecules occur in the process of energy production?
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How is energy stored in the cells after metabolizing food?
How is energy stored in the cells after metabolizing food?
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What role do NADH and FADH2 play in metabolism?
What role do NADH and FADH2 play in metabolism?
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What is the composition of the outer membrane of mitochondria?
What is the composition of the outer membrane of mitochondria?
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What is the role of organelles within the cell?
What is the role of organelles within the cell?
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What happens to fructose and galactose in the liver?
What happens to fructose and galactose in the liver?
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What is the primary purpose of glycolysis?
What is the primary purpose of glycolysis?
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Where does glycolysis take place within the cell?
Where does glycolysis take place within the cell?
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What is the nature of glycolysis in terms of oxygen requirement?
What is the nature of glycolysis in terms of oxygen requirement?
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What characterizes the energy-investment phase of glycolysis?
What characterizes the energy-investment phase of glycolysis?
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How many ATP molecules are produced during the energy-production phase of glycolysis?
How many ATP molecules are produced during the energy-production phase of glycolysis?
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What is the process of substrate-level phosphorylation?
What is the process of substrate-level phosphorylation?
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Which of the following molecules are produced from glucose in the glycolysis pathway?
Which of the following molecules are produced from glucose in the glycolysis pathway?
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What is the product formed when the carbamoyl group is transferred to ornithine?
What is the product formed when the carbamoyl group is transferred to ornithine?
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In which part of the cell does citrulline combine with aspartate during the urea cycle?
In which part of the cell does citrulline combine with aspartate during the urea cycle?
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What energy source is utilized during the condensation of citrulline and aspartate?
What energy source is utilized during the condensation of citrulline and aspartate?
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Which intermediate is cleaved from argininosuccinate in the urea cycle?
Which intermediate is cleaved from argininosuccinate in the urea cycle?
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What is the final product of arginine hydrolysis in the urea cycle?
What is the final product of arginine hydrolysis in the urea cycle?
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What component is returned to the mitochondrion to pick up another carbamoyl group?
What component is returned to the mitochondrion to pick up another carbamoyl group?
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What overall transformation does the urea cycle facilitate?
What overall transformation does the urea cycle facilitate?
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In the urea cycle, which of the following represents the stoichiometry of the overall reaction?
In the urea cycle, which of the following represents the stoichiometry of the overall reaction?
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What occurs during the hydrolysis of succinyl CoA?
What occurs during the hydrolysis of succinyl CoA?
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During the dehydrogenation of succinate, what is produced?
During the dehydrogenation of succinate, what is produced?
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What is the purpose of hydration in the conversion of fumarate?
What is the purpose of hydration in the conversion of fumarate?
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What does malate convert to during its dehydrogenation?
What does malate convert to during its dehydrogenation?
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What is the result of the oxidation of succinate during dehydrogenation?
What is the result of the oxidation of succinate during dehydrogenation?
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Which molecule is directly involved in the reduction of FAD to FADH2?
Which molecule is directly involved in the reduction of FAD to FADH2?
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What initiates the conversion of succinyl CoA to GTP?
What initiates the conversion of succinyl CoA to GTP?
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Which of the following statements about the reactions is correct?
Which of the following statements about the reactions is correct?
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Study Notes
Metabolic Pathways and Energy Production
- Metabolism encompasses all chemical reactions within cells, breaking down (catabolism) or building (anabolism) molecules.
- A metabolic pathway is a sequence of linked reactions, each catalyzed by a specific enzyme.
- Pathways can be linear, where a final product is generated, or cyclic, where the first reactant is regenerated.
- Food (polysaccharides, lipids, proteins) is digested into smaller molecules (glucose, fatty acids, amino acids) releasing energy.
- Cells store energy as ATP (adenosine triphosphate); this is then broken down to do work.
- Catabolic reactions involve breaking down large, complex molecules into smaller ones, releasing energy.
- Anabolic reactions use ATP energy to build larger molecules.
- Metabolism's stages are organized into:
- Stage 1: Digestion and hydrolysis break down large molecules to small ones.
- Stage 2: Degradation breaks down molecules into two- and three-carbon compounds.
- Stage 3: Oxidation of small molecules in the citric acid cycle and electron transport provide ATP energy (electrons are carried by NADH and FADH2).
Metabolism and Cell Structure
- Metabolic reactions occur within specific sites in cells, namely organelles.
- Organelles are minute structures in cytoplasm that perform specific cellular functions.
- Organelles are surrounded by cytosol, the fluid part of the cytoplasm.
- The main organelles involved in metabolism are:
- Nucleus
- Rough endoplasmic reticulum
- Smooth endoplasmic reticulum
- Ribosomes
- Mitochondria
- Golgi complex
- Lysosomes
- Plasma membrane
Important Nucleotide-Containing Compounds in Metabolic Pathways
- ATP (adenosine triphosphate) is the main energy currency in cells, formed by the oxidation of food.
- ATP consists of adenine, ribose sugar, and three phosphate groups.
- Hydrolysis of ATP to ADP releases energy (7.3 kcal/mol or 31 kJ/mol).
- Hydrolysis of ADP to AMP also releases energy.
Coenzymes in Metabolic Pathways
- Many metabolic reactions, involved in energy extraction, entail oxidation and reduction.
- Oxidation involves the loss of Hydrogen atoms.
- Reduction involves the gain of Hydrogen atoms.
- Coenzymes are necessary to transport hydrogen and electrons.
Oxidation and Reduction
- Oxidation is the loss of electrons or hydrogen or the gain of oxygen.
- Reduction is the gain of electrons or hydrogen or the loss of oxygen.
Coenzyme NAD+
- NAD+ is a coenzyme involved in redox reactions.
- It accepts hydrogen and electrons when an oxidation reaction occurs in metabolic pathways.
Coenzyme FAD
- FAD is a coenzyme involved in redox reactions.
- It accepts hydrogen and electrons during redox reactions by forming a double bond in the substance.
Coenzyme A
- Coenzyme A (CoA) activates acyl groups, especially in the transfer of acetyl groups.
- It has a reactive thiol group (-SH) that forms a high-energy thioester with acyl groups.
High-Energy Phosphate Compounds
- High-energy compounds contain one or more very reactive bonds, often called "strained bonds."
- The energy balance in chemical reactions between breaking and reforming bonds determines whether there's a net gain or loss of energy.
Digestion of Carbohydrates (Glycolysis)
- Stage 1 of carbohydrate digestion: Polysaccharides are broken down into monosaccharides.
- Stage 2: Degradation of monosaccharides (glucose)into smaller molecules.
- Glycolysis involves a series of reactions that degrades glucose (6 carbon atoms) to pyruvate (3 carbon atoms).
- Glycolysis is an anaerobic process that does not require oxygen.
Pathways for Pyruvate
- Depending on oxygen availability, pyruvate has different fates:
- Aerobic conditions: Pyruvate is decarboxylated to Acetyl CoA, a crucial molecule for the citric acid cycle.
- Anaerobic conditions (humans, animals, and some microorganisms): Pyruvate is reduced to lactate, an important molecule to regenerate NAD+ and sustain glycolysis.
- Anaerobic conditions (some microorganisms): Pyruvate is converted to ethanol through decarboxylation and reduction.
The Citric Acid Cycle
- The citric acid cycle, also known as the Krebs cycle, is a crucial aerobic pathway for energy production in mitochondria.
- It involves the oxidation of acetyl CoA into CO2, generating energy-carrying molecules (NADH and FADH2) and ATP.
- This stage of metabolism occurs under aerobic conditions and proceeds in a cycle.
Electron Transport Chain
- The electron transport chain involves a series of protein complexes embedded in the inner mitochondrial membrane.
- Electrons from NADH and FADH2 are passed along the chain to oxygen, generating ATP.
- The flow of protons through ATP synthase, a protein complex also in the membrane, drives ATP synthesis.
Oxidative Phosphorylation and ATP
- Oxidative phosphorylation involves ATP synthase utilizing the proton gradient across the inner mitochondrial membrane to produce ATP.
Fatty Acid Oxidation
- Fatty acids are activated in the cytosol by combining them with coenzyme A (CoA) to form fatty acyl-CoA.
- Fatty acyl-CoA is transported into mitochondria.
- Fatty acyl-CoA undergoes a cycle known as beta-oxidation to produce acetyl-CoA, NADH, and FADH2, while shortening the fatty acid molecule.
- The acetyl-CoA molecules enter the citric acid cycle for further energy production.
Ketogenesis and Ketone Bodies
- Ketogenesis is a process that produces ketone bodies (acetoacetate, 𝛽-hydroxybutyrate, and acetone) from acetyl CoA when carbohydrates aren't available as an energy source.
- Ketone bodies are utilized as alternative energy sources by the brain and other tissues.
- Ketosis, an elevated level of ketone bodies, can result from conditions like uncontrolled diabetes and starvation.
Protein Metabolism
- Protein digestion involves breaking down proteins to individual amino acids.
- In the stomach, HCl activates pepsin to break peptide bonds.
- Trypsin and chymotrypsin, in the small intestine, further break down polypeptides to individual amino acids.
- The amino acids are absorbed into the bloodstream to be used by cells.
Transamination
- Transamination is the process of transferring an amino group from one amino acid to a keto acid, producing a new amino acid and a new keto acid.
- Glutamate is the primary amino acid in transamination reactions.
- Transamination reactions are commonly catalyzed by enzymes called transaminases or aminotransferases.
Oxidative Deamination
- Oxidative deamination is a process where the amino group is removed from glutamate, generating ammonium ion (NH4+).
- This process provides a-ketoglutarate, necessary for transamination reactions and other metabolic processes.
Urea Cycle
- The urea cycle converts harmful ammonium ions (NH4+) into urea in the liver.
- Urea is an excretable waste product that's non-toxic and transported to kidneys for excretion.
- The urea cycle consists of several reactions that convert ammonium with CO2 and aspartate to urea.
Fate of Carbon Atoms from Amino Acids
- Carbon skeletons of different amino acid families (e.g., C-3 family, C-4 family, C-5 family) enter different intermediates via pyruvate, oxaloacetate, or a-ketoglutarate. These intermediates are then used in the citric acid cycle for further energy production.
Glucogenic and Ketogenic Amino Acids
- Glucogenic amino acids can be converted to glucose or intermediates used for glucose synthesis.
- Ketogenic amino acids cannot be converted to glucose, instead they provide carbon skeletons for ketone body synthesis and fatty acid production.
Additional Information (General Overview)
- Anabolic pathways build molecules, requiring ATP.
- Catabolic pathways break down molecules, releasing ATP.
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