24 Questions
What is the region of an enzyme surface that binds the substrate molecule and catalytically transforms it?
Active site
What type of specificity do enzymes exhibit in terms of substrate binding?
Substrate specificity
What is the main function of enzymes in chemical reactions?
Increase the speed of the reaction
What type of residues line the surface of an enzyme's active site?
Amino acid residues
What creates tension between the substrate and catalytic residues to increase reaction rate?
$Proximity$
What specialized pockets do enzymatic reactions occur in?
Active sites
What can modulate enzyme activity by modifying the active site?
Regulating agents
What type of energy state is the transition state in a chemical reaction?
Higher energy state
What needs to be given to the substrate to reach the intermediate compound in a chemical reaction?
Activation energy
What does enzyme proximity with substrates create between them and catalytic residues?
Tension
What type of vitamins are mentioned as coenzymes in the text?
Water-soluble vitamins
What does an enzyme's catalytic activity depend on?
The integrity of its native protein conformation.
What is the maximum rate of a reaction when the enzyme is saturated with substrate?
Vmax
Which of the following factors does not affect the reaction rate in enzymatic kinetics?
Product concentration
What is the study of the rate of a reaction and how it changes in response to changes in experimental parameters called?
Enzymatic kinetics
What type of enzyme is modulated by the noncovalent binding of a specific metabolite at a site other than the active site?
Allosteric enzyme
What is the most common covalent modification in hormonal signal characteristic?
Phosphorylation
Which part of an enzyme is a metal ion or organic compound covalently bound to a protein and essential to its activity?
Prosthetic group
What is the sequence of consecutive enzymatic reactions in which the product of one reaction becomes the substrate in the next one called?
Metabolic pathway
What regulates enzyme activity through its capacity to undergo a change in catalytic activity by allosteric mechanisms or by covalent modification?
Regulatory enzyme
Which small metabolites or cofactors bind to the allosteric site of an allosteric enzyme and modify its catalytic activity?
Allosteric modulators or effectors
What part of an enzyme consists of complex organic or metalloorganic molecules such as Coenzyme A, NADH, and FADH2?
Coenzyme
Which factor represents the number of substrate molecules converted to product per unit time?
Rate or velocity of a reaction (V0)
What represents the specific site on the surface of an allosteric protein molecule to which the modulator or effector molecule binds?
Allosteric site
Study Notes
Enzyme Structure and Function
- The region of an enzyme surface that binds the substrate molecule and catalytically transforms it is called the active site.
- Enzymes exhibit high specificity for substrate binding, meaning they only bind to specific substrates.
Active Site Characteristics
- The surface of an enzyme's active site is lined with polar and non-polar residues that create a unique environment for substrate binding.
- The interaction between the substrate and catalytic residues creates tension, increasing the reaction rate.
Enzymatic Reactions
- Enzymatic reactions occur in specialized pockets, allowing for efficient substrate binding and catalysis.
- The main function of enzymes in chemical reactions is to lower the activation energy, allowing the reaction to proceed faster.
Modulation of Enzyme Activity
- Enzyme activity can be modulated by modifying the active site, such as through phosphorylation or binding of regulatory molecules.
- Allosteric modulators, such as small metabolites or cofactors, bind to the allosteric site of an allosteric enzyme and modify its catalytic activity.
Enzymatic Kinetics
- The transition state is a high-energy state in a chemical reaction, and enzymes help to lower the energy required to reach this state.
- The substrate must gain energy to reach the intermediate compound in a chemical reaction.
- Enzyme proximity with substrates creates a conformational change, allowing the substrate to bind more efficiently and increasing the reaction rate.
Coenzymes and Cofactors
- Vitamins B and C are mentioned as coenzymes in the text.
- Coenzymes are specialized molecules that bind to the active site of an enzyme and are essential for its activity.
Enzyme Regulation
- Enzyme catalytic activity depends on the binding of substrates and cofactors to the active site.
- The maximum rate of a reaction when the enzyme is saturated with substrate is called Vmax.
- Temperature, pH, and substrate concentration are factors that affect the reaction rate in enzymatic kinetics, but not enzyme concentration.
Metabolic Pathways
- The sequence of consecutive enzymatic reactions in which the product of one reaction becomes the substrate in the next one is called a metabolic pathway.
- The study of the rate of a reaction and how it changes in response to changes in experimental parameters is called enzymatic kinetics.
Allosteric Enzymes
- Allosteric enzymes are modulated by the noncovalent binding of a specific metabolite at a site other than the active site.
- The most common covalent modification in hormonal signal characteristic is phosphorylation.
Enzyme Components
- The part of an enzyme that is a metal ion or organic compound covalently bound to a protein and essential to its activity is called a prosthetic group.
- The part of an enzyme that consists of complex organic or metalloorganic molecules such as Coenzyme A, NADH, and FADH2 is called a cofactor.
- The specific site on the surface of an allosteric protein molecule to which the modulator or effector molecule binds is called the allosteric site.
Enzyme Activity
- The factor that represents the number of substrate molecules converted to product per unit time is called the turnover number.
- The allosteric site represents the specific site on the surface of an allosteric protein molecule to which the modulator or effector molecule binds.
Test your knowledge on the importance of enzymes in biological reactions, the role of water-soluble vitamins as coenzymes, regulation of enzyme activity, and the structure of enzymes. Explore concepts such as active sites and the dependence of catalytic activity on native protein conformation.
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