Enzymes Lecture Notes Overview

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Questions and Answers

What is the primary role of enzymes in living organisms?

  • Facilitate biochemical reactions (correct)
  • Serve as structural components
  • Regulate cell division
  • Act as genetic material

How do enzymes accelerate the rate of reactions?

  • By changing the reaction mechanism
  • By increasing the temperature of the substrate
  • By lowering the activation energy required (correct)
  • By altering the concentration of products

What is one important characteristic of enzyme catalysts?

  • They can be reused multiple times (correct)
  • They change the equilibrium of reactions
  • They are consumed in the reaction
  • They function at a constant rate irrespective of concentration

Why is enzyme localization within specific organelles important?

<p>It isolates substrates or products from competing reactions (C)</p> Signup and view all the answers

What does the IUB classification of enzymes primarily focus on?

<p>Chemical reactions they catalyze (C)</p> Signup and view all the answers

Which of the following statements is true regarding the role of enzymes in diagnosis?

<p>Enzymes can indicate disease such as myocardial infarction (C)</p> Signup and view all the answers

Which of the following best represents a therapeutic use of enzymes?

<p>Utilizing digestive enzymes (D)</p> Signup and view all the answers

What is NOT a property of enzymes?

<p>They can function without co-factors (A)</p> Signup and view all the answers

What is the primary reason enzymes are considered more efficient than non-enzyme catalysts?

<p>They lower the activation energy. (C)</p> Signup and view all the answers

Which of the following statements about enzyme commission numerical code (EC) is true?

<p>The EC code consists of four digits that categorize enzymes. (A)</p> Signup and view all the answers

What type of enzymes are trypsin and pepsin classified as?

<p>Trivial names (D)</p> Signup and view all the answers

Which of the following enzyme-substrate pairs is correctly matched?

<p>Amylase - Starch (B), Lactase - Lactose (D)</p> Signup and view all the answers

What component indicates the cofactor in the enzyme commission code E.C. 1.1.1.1?

<p>Third digit (C)</p> Signup and view all the answers

What happens to the reaction velocity of enzymes as substrate concentration increases?

<p>It increases until maximal velocity (Vmax) is reached. (B)</p> Signup and view all the answers

In the reaction catalyzed by alcohol dehydrogenase, which of the following is the substrate?

<p>R-CH2OH (C)</p> Signup and view all the answers

What characterizes the plot of initial reaction velocity against substrate concentration for allosteric enzymes?

<p>It results in a sigmoidal curve. (D)</p> Signup and view all the answers

What is the primary action of protease enzymes?

<p>To hydrolyze proteins (A)</p> Signup and view all the answers

How does enzyme concentration affect enzyme velocity?

<p>Velocity initially increases, then decreases due to substrate depletion. (A)</p> Signup and view all the answers

Which enzyme acts on maltose to produce glucose?

<p>Maltase (D)</p> Signup and view all the answers

At what temperature do most human enzymes denature?

<p>Above 40°C (D)</p> Signup and view all the answers

What is the effect of temperature on enzyme activity up to the optimum temperature?

<p>It increases reaction velocity. (A)</p> Signup and view all the answers

What occurs when pH deviates from an enzyme's optimum pH?

<p>The enzyme can become denatured and inactive. (C)</p> Signup and view all the answers

What underlies the relationship between enzyme active sites and substratum at optimum pH?

<p>The active site and substrate are in their optimum ionization state. (A)</p> Signup and view all the answers

What factors affect enzyme activity according to the provided information?

<p>Enzyme concentration, temperature, and pH. (A)</p> Signup and view all the answers

What is the main role of enzymes in chemical reactions?

<p>To speed up reactions without being consumed (B)</p> Signup and view all the answers

What part of the enzyme is crucial for substrate attachment?

<p>Active site (B)</p> Signup and view all the answers

Which of the following is true regarding the specificity of enzymes?

<p>Enzymes exhibit varying degrees of specificity (C)</p> Signup and view all the answers

What is a coenzyme?

<p>A cofactor loosely bound to an enzyme (D)</p> Signup and view all the answers

How do enzymes lower the activation energy required for a reaction?

<p>By stabilizing the transition state (C)</p> Signup and view all the answers

What distinguishes conjugated enzymes from simple enzymes?

<p>Conjugated enzymes consist of protein and non-protein parts (D)</p> Signup and view all the answers

What type of cofactor is tightly bound to an enzyme?

<p>Prosthetic group (D)</p> Signup and view all the answers

Which of the following statements about enzymes is correct?

<p>Enzymes function optimally at specific ranges of pH and temperature (C)</p> Signup and view all the answers

Which enzyme is routinely used for diagnosing Acute Myocardial Infarction?

<p>Creatine Phospho kinase (CPK) (C)</p> Signup and view all the answers

Which enzyme is reflective of damage to hepatocytes?

<p>Aspartate transaminase (AST) (C)</p> Signup and view all the answers

For which therapeutic application is Streptokinase/Urokinase used?

<p>Acute MI, Pulmonary embolism (B)</p> Signup and view all the answers

Which enzyme is used as a tumor marker for prostate cancer?

<p>Serum acid phosphatase (B)</p> Signup and view all the answers

Which enzyme is associated with cholestasis?

<p>Alkaline phosphatase (B)</p> Signup and view all the answers

Which enzyme is primarily used to test for triglycerides?

<p>Lipase (A)</p> Signup and view all the answers

Which enzyme reflects advanced malignancies and leukemias?

<p>Serum LDH (C)</p> Signup and view all the answers

Hyaluronidase is primarily used for which purpose?

<p>Enhanced local anesthesia (A)</p> Signup and view all the answers

Which enzyme is utilized in the testing of glucose levels?

<p>Glucose oxidase (A)</p> Signup and view all the answers

Which enzyme is associated with pancreatic insufficiency?

<p>Trypsin, lipase and amylase (A)</p> Signup and view all the answers

What is the primary role of enzymes secreted by the liver into the blood?

<p>To serve as inactive precursors for enzymes involved in blood coagulation (B)</p> Signup and view all the answers

Increased levels of certain plasma enzymes may indicate what?

<p>Tissue damage (D)</p> Signup and view all the answers

How can enzyme activity levels in plasma assist in patient evaluation?

<p>They correlate with the extent of tissue damage (A)</p> Signup and view all the answers

Which of the following is NOT a use of serum enzyme activity assays?

<p>Providing energy for cellular functions (B)</p> Signup and view all the answers

What defines isoenzymes (isozymes)?

<p>They catalyze the same reaction but have different polypeptide chains (A)</p> Signup and view all the answers

Which of the following diseases can enzymes serve as diagnostic markers for?

<p>Cancers (B)</p> Signup and view all the answers

What is a common application of enzymatic assays in clinical settings?

<p>They assist in the detection of gastrointestinal tract diseases (C)</p> Signup and view all the answers

What happens to the levels of intracellular enzymes during normal cell turnover?

<p>They are released into the plasma without physiological use (B)</p> Signup and view all the answers

Flashcards

Enzyme characteristics

Enzymes are biological catalysts that speed up chemical reactions in living organisms.

Enzyme properties

Enzymes have specific properties that affect their function, such as location within the cell, and impact on speeding up the reactions.

Enzyme acceleration of reactions

Enzymes lower the activation energy needed for chemical reactions to occur, making them happen faster.

Enzyme composition & nomenclature

Enzymes have a specific structure and are named according to the reactions they catalyze.

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IUB enzyme classification

Enzymes are categorized by the type of reaction they catalyze.

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Factors affecting enzyme activity

Several factors, like temperature and pH, can influence enzyme function.

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Clinical enzymology

Study of enzymes in the blood to diagnose diseases.

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Enzyme role in metabolism

Enzymes are crucial for coordinating all biochemical and metabolic reactions in the body.

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Catalyst

A substance that speeds up a chemical reaction without being consumed.

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Enzyme

A biological catalyst, usually a protein, that speeds up chemical reactions in living organisms.

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Active Site

The part of an enzyme where the substrate binds and the reaction occurs.

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Simple Enzyme

An enzyme composed only of amino acids.

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Conjugated Enzyme

An enzyme made of a protein (apoenzyme) and a non-protein helper (cofactor).

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Cofactor

The non-protein part of a conjugated enzyme, which helps it function.

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Activation Energy

The energy needed to start a chemical reaction.

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Substrate

The substance that an enzyme acts upon.

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Enzyme efficiency

Enzymes greatly accelerate reactions, making them occur 10^3 to 10^8 times faster than uncatalyzed reactions.

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Enzyme activity

The rate at which an enzyme catalyzes a reaction.

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What is activation energy?

The minimum amount of energy needed to start a chemical reaction. Enzymes lower the activation energy.

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Enzyme Commission (EC) number

A unique four-digit code that classifies enzymes based on their function.

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EC number first digit

Indicates the enzyme class (e.g., oxidoreductase, transferase).

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EC number second digit

Represents the chemical group acted upon by the enzyme (e.g., -OH, -CHO).

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EC number third digit

Identifies the cofactor required by the enzyme (e.g., NAD+).

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EC number fourth digit

Specifies the specific substrate of the enzyme.

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Plasma enzyme levels

The amount of specific enzymes found in the blood, often indicating tissue damage.

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Why are enzymes important in clinical diagnosis?

Changes in specific enzyme levels in the blood can help doctors identify and monitor diseases affecting various organs.

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What's the significance of increased plasma enzymes?

Elevated levels of specific intracellular enzymes in the blood often signal tissue damage or disease.

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Isoenzyme definition

Different molecular forms of an enzyme with the same catalytic function but varying structures.

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Isoenzyme significance

Allow for more precise diagnosis by indicating the specific tissue origin of the enzyme.

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Diagnostic markers

Specific enzymes that can be used to detect and monitor certain diseases.

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Myocardial Infarction

Heart attack

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Liver diseases

Conditions affecting the liver

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Enzyme Velocity & Substrate Concentration

The speed of an enzyme-catalyzed reaction increases as the amount of substrate increases, until it reaches a maximum velocity called Vmax. This happens when all enzyme active sites are occupied by substrate molecules.

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Hyperbolic Curve

The relationship between enzyme velocity and substrate concentration is typically represented by a hyperbolic curve. This means the velocity increases rapidly at first, then slows down and plateaus.

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Allosteric Enzyme

Allosteric enzymes show a sigmoidal curve, indicating a different pattern of reaction velocity versus substrate concentration. Their activity is influenced by binding of molecules at sites other than the active site.

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Enzyme Concentration & Velocity

Higher enzyme concentration leads to higher reaction velocity, up to a point. Increasing enzyme concentration increases the number of active sites available for substrate binding, accelerating the reaction.

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Optimum Temperature

Every enzyme has a specific temperature at which it functions best. Above or below this temperature, the enzyme's activity slows down or may even stop due to denaturation.

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Enzyme Denaturation

High temperature can cause an enzyme to lose its shape and ability to function, making it inactive. This is like altering the key so it no longer fits the lock.

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pH & Enzyme Activity

Each enzyme works best at a specific pH. Outside this range, the enzyme's activity decreases due to changes in its ionic state. Extreme pH can denature the enzyme.

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Plasma Enzymes & Diagnosis

Clinical enzymology studies enzymes in blood to diagnose diseases. Some enzymes are normally present in the blood, while others are released only when tissues are damaged.

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LDH isoenzymes

Different forms of Lactate Dehydrogenase (LDH) with varying affinities for the substrate. They are also affected differently by activators and inhibitors.

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Serum enzymes in Acute Myocardial Infarction

Enzymes released into the bloodstream when heart muscle is damaged, indicating a heart attack. These enzymes include Creatine Phosphokinase (CPK), Aspartate Transaminase (AST), and Lactate Dehydrogenase (LDH).

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Serum enzymes in Liver Diseases

Enzymes released from damaged liver cells, aiding in diagnosis of liver conditions. They are categorized into two types: those reflecting damage to hepatocytes (liver cells) and those reflecting cholestasis (bile flow blockage).

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Alanine Transaminase (ALT)

An enzyme mainly found in the liver, released into the blood when liver cells are damaged. It is a more specific indicator of liver damage compared to AST.

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Aspartate Transaminase (AST)

An enzyme present in various tissues, including the liver and heart. Elevated levels can suggest liver damage, but also heart problems.

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Alkaline Phosphatase

An enzyme often elevated in cases of cholestasis, a condition where bile flow from the liver is blocked. It can also be increased in bone disorders.

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5'-Nucleotidase

An enzyme primarily found in the liver, primarily elevated in cases of cholestasis, like alkaline phosphatase.

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Urease

An enzyme used in tests to measure urea levels in the blood. Urea is a waste product from protein metabolism.

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Glucose Oxidase

An enzyme used in tests to measure glucose levels in the blood. Glucose is the primary sugar used by the body for energy.

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Enzymes as Therapeutic Agents

Enzymes can be used as medications to treat various conditions, for example, dissolving blood clots (Streptokinase/Urokinase), aiding digestion (Trypsin, Lipase, Amylase), and reducing inflammation (Papain, Chymotrypsin).

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Study Notes

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Enzymes Lecture Notes

  • Objectives: Students will be able to:
    • Identify enzyme catalyst characteristics.
    • Understand enzyme properties.
    • Explain how enzymes accelerate reactions.
    • Understand enzyme composition and nomenclature.
    • Identify IUB enzyme classification.
    • Know factors affecting enzyme activity.
    • Understand clinical enzymology in disease diagnosis.

Enzyme Importance

  • Enzymes play a key role in metabolism, diagnosis, and therapeutics.
  • All biochemical reactions in living organisms are catalyzed by enzymes.
  • Enzyme levels in blood can be diagnostic indicators, such as in myocardial infarction.
  • Enzymes can be used therapeutically or commercially (e.g., detergents).

Enzyme Location in Cells

  • Many enzymes are found in specific organelles within cells.
  • Compartmentalization isolates substrates/products to prevent competing reactions.
  • This creates a favorable environment for enzyme action within cells.

Important Definitions

  • Catalyst: Organic or inorganic substances that accelerate chemical reactions.
  • Enzyme: Biological catalysts that speed up reactions without being part of the reaction.
  • Enzymes (function): Proteins produced by living cells that catalyze chemical reactions in cells.

Active Site

  • Active site is where substrates bind on an enzyme molecule.
  • Enzymes are typically large proteins with a special pocket or cleft as their active site.
  • Substrate enters active site, enzyme binds, products are formed, and products leave.

General Enzyme Characteristics

  • Enzymes are neither consumed nor produced during reactions.
  • Most enzymes are proteins.
  • Enzymes have varying degrees of specificity for substrates.
  • Enzymes can recognize/catalyze a single substrate, groups of similar substrates, or particular types of bonds.
  • Typically function in a moderate pH and temperature range.

Enzyme Specificity

  • Absolute: Catalyzes one type of reaction for a single substrate (e.g., urease and urea hydrolysis).
  • Group: Catalyzes a single reaction for similar substrates (e.g., hexokinase).
  • Linkage: Catalyzes a single reaction for a specific bond type (e.g., chymotrypsin and peptide bond hydrolysis).

Enzyme Composition

  • Enzymes are either simple proteins or conjugated proteins.
  • Simple enzymes: Hydrolysis yields only amino acids (native conformation required for activity).
  • Conjugated enzymes (holoenzymes): Composed of a protein part (apoenzyme) and a non-protein part (cofactor).
    • Prosthetic groups: Tightly bound cofactors that cannot be removed without enzyme destruction (e.g., FAD, metals).
    • Coenzymes: Loosely bound cofactors that can be separated from the apoprotein (e.g., NAD, FAD, coenzyme-A).

Enzyme Acceleration of Reactions

  • Enzymes decrease activation energy.
  • Enzymes accelerate reactions by reducing energy needed to convert substrate to transition state.
  • Enzyme-catalyzed reactions are typically much faster than uncatalyzed reactions.

Factors Affecting Enzyme Activity

  • Substrate concentration: Rate increases with substrate concentration until maximal velocity.
  • Enzyme concentration: Rate increases with increasing enzyme concentration.
  • Temperature: Optimum temperature exists for each enzyme where activity is highest; further increases lead to denaturation.
  • pH: Optimum pH for each enzyme; changes outside this range lead to denaturation.

Clinical Enzymology

  • Blood plasma contains enzymes that can indicate tissue damage.
  • Many diseases cause increased release of intracellular enzymes to the blood.
  • Enzyme activity levels are often helpful for diagnosing and assessing the severity/prognosis of certain diseases (e.g., myocardial infarction or liver diseases).

Enzymes in Clinical Diagnosis

  • Enzymes can serve as diagnostic markers.
  • Enzymes can be used in biochemical estimations and tests (useful for various diseases like myocardial infarction, liver diseases, muscle diseases, bone diseases, cancers, and GI tract diseases).

Enzyme Assays in Clinical Diagnosis

  • Myocardial Infarction: Creatine phosphokinase (CPK), aspartate transaminase (AST), lactate dehydrogenase (LDH).
  • Liver Diseases: Alanine transaminase (ALT), aspartate transaminase (AST), alkaline phosphatase, 5'-nucleotidase.

Other Enzyme Uses

  • Enzymes are used as diagnostic reagents (e.g. urease, glucose oxidase, cholesterol oxidase, and lipase).
  • Enzymes may be used therapeutically (e.g. streptokinase, trypsin, lipase, amylase, and hyaluronidase for various medical applications).

Enzymes as Tumor Markers

  • Some enzymes (e.g., serum acid phosphatase and serum alkaline phosphatase) may be elevated in specific cancers or metastases, indicating possible issues.

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