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Questions and Answers
What happens to the reaction rate when the enzyme concentration is increased while keeping the substrate concentration constant?
What happens to the reaction rate when the enzyme concentration is increased while keeping the substrate concentration constant?
- The reaction rate increases. (correct)
- The reaction rate remains unchanged.
- The reaction rate fluctuates unpredictably.
- The reaction rate decreases significantly.
What does the induced fit model describe regarding enzyme activity?
What does the induced fit model describe regarding enzyme activity?
- Enzymes do not interact with substrates.
- Enzymes are only effective with perfectly shaped substrates.
- Enzymes have a rigid active site.
- Enzymes have a flexible active site that adapts to substrates. (correct)
What type of molecule is represented by the structure labeled 'Dipeptide'?
What type of molecule is represented by the structure labeled 'Dipeptide'?
- Monosaccharide
- Protein (correct)
- Nucleotide
- Amino acid
Which of the following best describes the relationship between the enzyme's active site and the substrate in the induced fit model?
Which of the following best describes the relationship between the enzyme's active site and the substrate in the induced fit model?
What effect does increasing the concentration of urea have on the activity of urease?
What effect does increasing the concentration of urea have on the activity of urease?
Enzymes that catalyze the conversion of Fructose 6-phosphate to Fructose 1,6-bisphosphate primarily belong to which enzyme class?
Enzymes that catalyze the conversion of Fructose 6-phosphate to Fructose 1,6-bisphosphate primarily belong to which enzyme class?
In the context provided, which component is most likely indicated by 'R1' and 'R2' in the dipeptide structure?
In the context provided, which component is most likely indicated by 'R1' and 'R2' in the dipeptide structure?
What type of interactions are critical for maintaining the three-dimensional structure of enzymes?
What type of interactions are critical for maintaining the three-dimensional structure of enzymes?
What is the expected effect on enzyme activity if the temperature is increased beyond its optimum value?
What is the expected effect on enzyme activity if the temperature is increased beyond its optimum value?
Which molecule is likely to act as a substrate in the reactions involving Fructose 6-phosphate?
Which molecule is likely to act as a substrate in the reactions involving Fructose 6-phosphate?
Which statement regarding substrates and enzyme activity is incorrect?
Which statement regarding substrates and enzyme activity is incorrect?
How does a decrease in pH by one unit from the optimum value affect enzyme activity?
How does a decrease in pH by one unit from the optimum value affect enzyme activity?
What is the likely role of the molecule Fructose 1,6-bisphosphate in biochemical pathways?
What is the likely role of the molecule Fructose 1,6-bisphosphate in biochemical pathways?
If the substrate concentration is significantly higher than enzyme concentration, what is the limiting factor for reaction rate improvements?
If the substrate concentration is significantly higher than enzyme concentration, what is the limiting factor for reaction rate improvements?
Why is the induced fit model considered an improvement over earlier enzyme models?
Why is the induced fit model considered an improvement over earlier enzyme models?
What characterizes an organic oxidation reaction?
What characterizes an organic oxidation reaction?
Which statement about an organic reduction reaction is true?
Which statement about an organic reduction reaction is true?
Which enzyme catalyzes the transfer of an amino group?
Which enzyme catalyzes the transfer of an amino group?
What happens to substrate molecules when an enzyme is under saturation conditions?
What happens to substrate molecules when an enzyme is under saturation conditions?
What is the significance of an enzyme's turnover number?
What is the significance of an enzyme's turnover number?
What is the role of kinases in metabolism?
What is the role of kinases in metabolism?
What substance is typically produced by the action of kinases from ATP?
What substance is typically produced by the action of kinases from ATP?
How does enzyme concentration typically compare to substrate concentration in a reaction?
How does enzyme concentration typically compare to substrate concentration in a reaction?
Which enzyme has the highest turnover number according to the provided information?
Which enzyme has the highest turnover number according to the provided information?
Why is a coenzyme necessary for oxidoreductases?
Why is a coenzyme necessary for oxidoreductases?
What does an oxidoreductase enzyme specifically require?
What does an oxidoreductase enzyme specifically require?
What is NOT a factor affecting enzyme activity?
What is NOT a factor affecting enzyme activity?
What is the primary function of proteolytic enzymes?
What is the primary function of proteolytic enzymes?
How are oxidation and reduction processes related?
How are oxidation and reduction processes related?
What would happen if substrate concentration exceeds the saturation point?
What would happen if substrate concentration exceeds the saturation point?
What is typically the reason cells maintain a low concentration of enzyme molecules?
What is typically the reason cells maintain a low concentration of enzyme molecules?
What term is used to describe the inactive forms of proteolytic enzymes?
What term is used to describe the inactive forms of proteolytic enzymes?
Which reaction has the lowest turnover number based on the information given?
Which reaction has the lowest turnover number based on the information given?
Which suffix is commonly used in the names of zymogens?
Which suffix is commonly used in the names of zymogens?
What is the consequence of prematurely activating pepsinogen?
What is the consequence of prematurely activating pepsinogen?
What type of modification is commonly involved in regulating enzyme activity within a cell?
What type of modification is commonly involved in regulating enzyme activity within a cell?
What group is most commonly added or removed in the process of covalent modification?
What group is most commonly added or removed in the process of covalent modification?
What is required for the activation of a zymogen?
What is required for the activation of a zymogen?
Where does pepsinogen convert to its active form, pepsin?
Where does pepsinogen convert to its active form, pepsin?
Flashcards
Organic Oxidation
Organic Oxidation
An oxidation reaction in organic chemistry that involves increasing the number of carbon-oxygen bonds and/or decreasing the number of carbon-hydrogen bonds.
Organic Reduction
Organic Reduction
A reduction reaction in organic chemistry that involves decreasing the number of carbon-oxygen bonds and/or increasing the number of carbon-hydrogen bonds.
Transferase
Transferase
An enzyme that facilitates the transfer of a functional group from one molecule to another.
Transaminase
Transaminase
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Kinase
Kinase
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Induced fit
Induced fit
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Active Site
Active Site
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Substrate
Substrate
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R-group interactions
R-group interactions
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Enzyme-substrate complex
Enzyme-substrate complex
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What is a dipeptide?
What is a dipeptide?
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What class of enzyme catalyzes the transfer of a functional group?
What class of enzyme catalyzes the transfer of a functional group?
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What type of reaction is shown in the example?
What type of reaction is shown in the example?
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What is phosphorylation?
What is phosphorylation?
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What is a kinase?
What is a kinase?
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How does enzyme concentration affect reaction rate?
How does enzyme concentration affect reaction rate?
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How does temperature affect enzyme activity?
How does temperature affect enzyme activity?
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How does pH affect enzyme activity?
How does pH affect enzyme activity?
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How does substrate concentration affect reaction rate?
How does substrate concentration affect reaction rate?
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What is the lock-and-key model of enzyme activity?
What is the lock-and-key model of enzyme activity?
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Zymogen
Zymogen
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Zymogen Activation
Zymogen Activation
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Covalent Modification
Covalent Modification
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Phosphorylation
Phosphorylation
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Dephosphorylation
Dephosphorylation
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Pepsin
Pepsin
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Pepsinogen
Pepsinogen
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Phosphorylation/Dephosphorylation
Phosphorylation/Dephosphorylation
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Enzyme Saturation
Enzyme Saturation
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Turnover Number
Turnover Number
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Enzyme Concentration and Reaction Rate
Enzyme Concentration and Reaction Rate
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Enzyme Concentration vs. Substrate Concentration
Enzyme Concentration vs. Substrate Concentration
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Enzyme-Substrate Cycle
Enzyme-Substrate Cycle
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Optimum Conditions for Enzymes
Optimum Conditions for Enzymes
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Enzyme Activity and Substrate Concentration
Enzyme Activity and Substrate Concentration
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Factors Affecting Enzyme Activity
Factors Affecting Enzyme Activity
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Study Notes
Enzymes and Vitamins
- Enzymes are specialized proteins acting as biochemical catalysts.
- Without enzymes, biochemical reactions would proceed too slowly.
- Vitamins are dietary organic compounds needed in small amounts for normal cellular function.
- Many enzymes contain vitamins as part of their structures, essential for their catalytic function.
General Characteristics of Enzymes
- Enzymes are compounds (usually proteins) that catalyze biochemical reactions.
- Nearly every reaction in a cell requires a specific enzyme.
- Enzymes accelerate cellular reactions by millions of times compared to uncatalyzed reactions.
- Enzymes are not consumed during the reaction; they only help reactions proceed faster.
Enzyme Structure
- Enzymes are categorized into simple and conjugated enzymes.
- Simple enzymes consist only of protein.
- Conjugated enzymes have a nonprotein part (cofactor) in addition to the protein part (apoenzyme).
- A cofactor's addition to apoenzyme creates holoenzyme.
- Cofactors are often small organic molecules (coenzymes) or inorganic ions.
- Vitamins often function as coenzymes in conjugated enzymes.
Nomenclature and Classification of Enzymes
- Enzyme naming systems focus on the reaction type and substrate.
- Suffix "-ase" typically identifies an enzyme.
- Prefixes often indicate type of reaction (e.g., oxidase, hydrolase).
- Substrate identification might also be included (e.g., glucose oxidase).
- Enzymes are grouped into six major classes based on the types of reactions they catalyze.
- Oxidoreductases, transferases, hydrolases, lyases, isomerases, ligases
Factors that Affect Enzyme Activity
- Temperature: Higher temperatures initially increase enzyme activity but eventually lead to denaturation (loss of structure), thus decreasing it.
- pH: Enzyme activity is optimal within a specific pH range. Significant pH shifts lead to denaturation, reducing activity.
- Substrate Concentration: Higher substrate concentrations boost activity up to the point where all enzyme active sites are occupied. Further increase has no effect (saturation).
- Enzyme Concentration: Increasing enzyme concentration (with constant substrate) boosts the reaction rate until all substrate molecules are engaged.
Enzyme Inhibition
- Enzyme inhibitors are substances that temporarily stop or slow an enzyme's catalytic function by binding to it.
- Reversible Competitive Inhibition: Inhibitor resembles the substrate and competes for the active site.
- Reversible Noncompetitive Inhibition: Inhibitor binds to a different site than the substrate, altering the enzyme's structure.
- Irreversible Inhibition: Inhibitor forms a strong covalent bond with the enzyme, permanently inactivating it.
Regulation of Enzyme Activity
- Allosteric enzymes are enzymes with multiple protein subunits and two types of binding sites (substrate and regulator).
- Feedback control is a regulatory mechanism where the end product of a reaction sequence inhibits the first enzyme in the pathway.
Medical Uses of Enzymes
- Enzymes can be used to diagnose diseases.
- Abnormal enzyme levels in blood often indicate tissue damage.
- Enzymes are also used therapeutically. (e.g., TPA in treating heart attacks).
Extremozymes
- Extremophiles are organisms that flourish in extreme environments.
- Extremozymes are microbial enzymes adapted to function under extreme conditions.
- Extremozymes are of industrial interest.
Water-Soluble Vitamins
- Water-soluble vitamins are required in frequent, small doses.
- These vitamins often act as coenzymes in biochemical reactions.
Fat-Soluble Vitamins
- The fat-soluble vitamins are vitamins A, D, E, and K.
- They dissolve in fat rather than water.
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