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Questions and Answers
What happens to the rate of a chemical reaction if an enzyme becomes non-functional?
What happens to the rate of a chemical reaction if an enzyme becomes non-functional?
What does a lower Km value indicate about an enzyme's affinity for its substrate?
What does a lower Km value indicate about an enzyme's affinity for its substrate?
How do competitive inhibitors affect the Km and Vmax of an enzyme-catalyzed reaction?
How do competitive inhibitors affect the Km and Vmax of an enzyme-catalyzed reaction?
What is Vmax in the context of enzyme kinetics?
What is Vmax in the context of enzyme kinetics?
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What effect does temperature have on enzyme activity?
What effect does temperature have on enzyme activity?
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What does the Induced Fit Model of enzyme action suggest about the shape of the active site?
What does the Induced Fit Model of enzyme action suggest about the shape of the active site?
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What is meant by absolute specificity of an enzyme?
What is meant by absolute specificity of an enzyme?
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How does an increase in temperature generally affect enzyme activity?
How does an increase in temperature generally affect enzyme activity?
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What effect does increasing substrate concentration have on enzyme activity, assuming enzyme concentration is constant?
What effect does increasing substrate concentration have on enzyme activity, assuming enzyme concentration is constant?
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What is the main characteristic of group specificity in enzymes?
What is the main characteristic of group specificity in enzymes?
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Which factor can cause enzyme denaturation, potentially leading to loss of function?
Which factor can cause enzyme denaturation, potentially leading to loss of function?
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What is the effect of increased enzyme concentration on the reaction rate, assuming substrate concentration is constant?
What is the effect of increased enzyme concentration on the reaction rate, assuming substrate concentration is constant?
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Which type of specificity allows an enzyme to distinguish between different stereoisomers?
Which type of specificity allows an enzyme to distinguish between different stereoisomers?
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What is the primary function of ACE inhibitors?
What is the primary function of ACE inhibitors?
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What is the role of transpeptidase in bacterial cells?
What is the role of transpeptidase in bacterial cells?
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Increased levels of which enzyme indicate a myocardial infarction?
Increased levels of which enzyme indicate a myocardial infarction?
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How does Tissue plasminogen activator (TPA) function in the treatment of myocardial infarction?
How does Tissue plasminogen activator (TPA) function in the treatment of myocardial infarction?
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Which drug acts on dihydrofolate reductase for cancer treatment?
Which drug acts on dihydrofolate reductase for cancer treatment?
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Which enzyme plays a key role in purine metabolism that can be inhibited by Allopurinol?
Which enzyme plays a key role in purine metabolism that can be inhibited by Allopurinol?
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What is the effect of temperature on enzyme activity?
What is the effect of temperature on enzyme activity?
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Which factor does NOT affect the specificity of an enzyme?
Which factor does NOT affect the specificity of an enzyme?
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Which of the following statements accurately describes the Michaelis-Menten kinetics?
Which of the following statements accurately describes the Michaelis-Menten kinetics?
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What does the induced fit model of enzymes describe?
What does the induced fit model of enzymes describe?
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Which factor does NOT affect enzyme specificity?
Which factor does NOT affect enzyme specificity?
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How does an increase in temperature generally affect enzyme activity?
How does an increase in temperature generally affect enzyme activity?
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What is the primary function of an enzyme?
What is the primary function of an enzyme?
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What are the key components of Michaelis-Menten kinetics?
What are the key components of Michaelis-Menten kinetics?
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Which of the following factors does NOT typically affect enzyme activity?
Which of the following factors does NOT typically affect enzyme activity?
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Which statement best describes enzyme specificity?
Which statement best describes enzyme specificity?
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How does temperature generally affect enzyme activity?
How does temperature generally affect enzyme activity?
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Which of the following enzymes catalyze redox reactions?
Which of the following enzymes catalyze redox reactions?
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What role do hydrolases play in biochemical reactions?
What role do hydrolases play in biochemical reactions?
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What does the Michaelis-Menten equation describe?
What does the Michaelis-Menten equation describe?
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Which enzymes are involved in the removal of a phosphate group?
Which enzymes are involved in the removal of a phosphate group?
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Which factor does NOT affect enzyme activity?
Which factor does NOT affect enzyme activity?
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Which statement about enzyme concentration and reaction rate is correct?
Which statement about enzyme concentration and reaction rate is correct?
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What is the name for the protein part of a conjugated enzyme?
What is the name for the protein part of a conjugated enzyme?
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Which of the following describes isomerases?
Which of the following describes isomerases?
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What type of molecules can serve as coenzymes?
What type of molecules can serve as coenzymes?
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What is the term for the specific region of an enzyme where substrate binds?
What is the term for the specific region of an enzyme where substrate binds?
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Which characteristic of enzymes allows them to accelerate reactions without being consumed?
Which characteristic of enzymes allows them to accelerate reactions without being consumed?
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Why must enzymes be used in small quantities?
Why must enzymes be used in small quantities?
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What happens to the Vmax of an enzyme when it is affected by a noncompetitive inhibitor?
What happens to the Vmax of an enzyme when it is affected by a noncompetitive inhibitor?
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How does an uncompetitive inhibitor affect both Vmax and Km?
How does an uncompetitive inhibitor affect both Vmax and Km?
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What is the function of an allosteric site on an enzyme?
What is the function of an allosteric site on an enzyme?
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What distinguishes positive allosteric regulation from negative allosteric regulation?
What distinguishes positive allosteric regulation from negative allosteric regulation?
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What defining characteristic of uncompetitive inhibitors impacts their reversal by substrate concentration?
What defining characteristic of uncompetitive inhibitors impacts their reversal by substrate concentration?
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What is the primary role of enzymes in biological reactions?
What is the primary role of enzymes in biological reactions?
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Which property differentiates enzymes from regular catalysts?
Which property differentiates enzymes from regular catalysts?
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What is an active site?
What is an active site?
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What does the term 'holoenzyme' refer to?
What does the term 'holoenzyme' refer to?
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Why are enzymes typically required in only small quantities?
Why are enzymes typically required in only small quantities?
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What defines the specificity of an enzyme?
What defines the specificity of an enzyme?
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What is the role of a coenzyme?
What is the role of a coenzyme?
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Which statement accurately describes how enzymes affect chemical reactions?
Which statement accurately describes how enzymes affect chemical reactions?
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Which suffix is commonly used for digestive enzymes?
Which suffix is commonly used for digestive enzymes?
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What type of enzyme catalyzes oxidation or reduction reactions?
What type of enzyme catalyzes oxidation or reduction reactions?
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Which of the following enzymes is responsible for hydrolyzing ester linkages in lipids?
Which of the following enzymes is responsible for hydrolyzing ester linkages in lipids?
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Which class of enzymes is known for transferring functional groups between molecules?
Which class of enzymes is known for transferring functional groups between molecules?
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What is the primary biochemical activity of lyases?
What is the primary biochemical activity of lyases?
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Which enzyme is an example of a dehydratase?
Which enzyme is an example of a dehydratase?
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Which class of enzymes is responsible for catalyzing isomerization changes?
Which class of enzymes is responsible for catalyzing isomerization changes?
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What type of reaction does an oxidase enzyme catalyze?
What type of reaction does an oxidase enzyme catalyze?
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Which reaction is facilitated by a kinase enzyme?
Which reaction is facilitated by a kinase enzyme?
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Which enzyme is used for the hydrolysis of glycosidic bonds in carbohydrates?
Which enzyme is used for the hydrolysis of glycosidic bonds in carbohydrates?
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What is the primary role of ligases in biochemical reactions?
What is the primary role of ligases in biochemical reactions?
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Which model of enzyme action proposes that the active site is rigid and does not change shape?
Which model of enzyme action proposes that the active site is rigid and does not change shape?
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What does absolute specificity mean in the context of enzymes?
What does absolute specificity mean in the context of enzymes?
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Which statement best describes the effect of increased temperature on enzyme kinetics?
Which statement best describes the effect of increased temperature on enzyme kinetics?
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How does the pH level affect enzyme activity?
How does the pH level affect enzyme activity?
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What happens to enzyme activity when substrate concentration is increased while enzyme concentration is kept constant?
What happens to enzyme activity when substrate concentration is increased while enzyme concentration is kept constant?
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Which type of specificity allows an enzyme to act on different substrates with similar functional groups?
Which type of specificity allows an enzyme to act on different substrates with similar functional groups?
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What kind of change occurs in the enzyme's active site during the induced fit model?
What kind of change occurs in the enzyme's active site during the induced fit model?
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Which enzyme specificity distinguishes between different stereoisomers?
Which enzyme specificity distinguishes between different stereoisomers?
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What is the effect of increasing enzyme concentration while keeping substrate concentration constant?
What is the effect of increasing enzyme concentration while keeping substrate concentration constant?
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What would be the expected outcome if an enzyme is no longer functional?
What would be the expected outcome if an enzyme is no longer functional?
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How does a competitive inhibitor affect the apparent Km value of an enzyme-catalyzed reaction?
How does a competitive inhibitor affect the apparent Km value of an enzyme-catalyzed reaction?
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What does Vmax represent in enzyme kinetics?
What does Vmax represent in enzyme kinetics?
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What characterizes a reversible non-competitive inhibitor?
What characterizes a reversible non-competitive inhibitor?
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Which statement regarding competitive inhibition is true?
Which statement regarding competitive inhibition is true?
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Which parameters are used in the Michaelis-Menten equation?
Which parameters are used in the Michaelis-Menten equation?
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What does a higher Km value indicate about an enzyme's affinity for its substrate?
What does a higher Km value indicate about an enzyme's affinity for its substrate?
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In the context of enzyme function, what is enzyme inhibition?
In the context of enzyme function, what is enzyme inhibition?
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What is the significance of the Lineweaver-Burke plot in understanding enzyme kinetics?
What is the significance of the Lineweaver-Burke plot in understanding enzyme kinetics?
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What does a lower Km value signify about an enzyme's performance?
What does a lower Km value signify about an enzyme's performance?
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What suffix is commonly associated with digestive enzymes?
What suffix is commonly associated with digestive enzymes?
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Which of the following classes of enzymes is responsible for catalyzing oxidation and reduction reactions?
Which of the following classes of enzymes is responsible for catalyzing oxidation and reduction reactions?
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What type of reaction do transferases typically catalyze?
What type of reaction do transferases typically catalyze?
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Which enzyme class specifically catalyzes the hydrolysis of bonds?
Which enzyme class specifically catalyzes the hydrolysis of bonds?
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What is the main function of isomerases?
What is the main function of isomerases?
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Which of the following is an example of a lyase?
Which of the following is an example of a lyase?
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What type of enzyme is most likely to catalyze the removal of water from a substrate?
What type of enzyme is most likely to catalyze the removal of water from a substrate?
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What is the primary biochemical activity of oxidoreductases?
What is the primary biochemical activity of oxidoreductases?
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What is the primary mechanism by which penicillin functions to kill bacteria?
What is the primary mechanism by which penicillin functions to kill bacteria?
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What is the role of lactate dehydrogenase (LDH) in diagnosing a myocardial infarction?
What is the role of lactate dehydrogenase (LDH) in diagnosing a myocardial infarction?
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Which drug is known for activating the enzyme plasminogen to dissolve blood clots?
Which drug is known for activating the enzyme plasminogen to dissolve blood clots?
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Which of the following drugs targets xanthine oxidase to treat hyperuricemia?
Which of the following drugs targets xanthine oxidase to treat hyperuricemia?
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Which enzyme is targeted by antifolates for cancer treatment?
Which enzyme is targeted by antifolates for cancer treatment?
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What effect does competitive inhibition have on the apparent Km of an enzyme-catalyzed reaction?
What effect does competitive inhibition have on the apparent Km of an enzyme-catalyzed reaction?
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In the context of enzyme kinetics, what does Vmax represent?
In the context of enzyme kinetics, what does Vmax represent?
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How does a lower Km value relate to an enzyme's affinity for its substrate?
How does a lower Km value relate to an enzyme's affinity for its substrate?
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What type of inhibition binds irreversibly to the enzyme's active site?
What type of inhibition binds irreversibly to the enzyme's active site?
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Which statement about competitive inhibitors is true?
Which statement about competitive inhibitors is true?
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What happens to the reaction rate if an enzyme is non-functional?
What happens to the reaction rate if an enzyme is non-functional?
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Which of the following describes the significance of Km in enzyme kinetics?
Which of the following describes the significance of Km in enzyme kinetics?
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Which scenario would not lead to increased enzyme activity?
Which scenario would not lead to increased enzyme activity?
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What characteristic of competitive inhibitors differentiates them from irreversible inhibitors?
What characteristic of competitive inhibitors differentiates them from irreversible inhibitors?
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In a Lineweaver-Burke plot for competitive inhibition, what changes are expected?
In a Lineweaver-Burke plot for competitive inhibition, what changes are expected?
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What is the primary function of ligases in biochemical reactions?
What is the primary function of ligases in biochemical reactions?
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What does the lock and key model of enzyme action imply about the active site?
What does the lock and key model of enzyme action imply about the active site?
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Which type of enzyme specificity allows for distinguishing between different stereoisomers?
Which type of enzyme specificity allows for distinguishing between different stereoisomers?
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How does an increase in temperature generally affect enzymes up to a certain point?
How does an increase in temperature generally affect enzymes up to a certain point?
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What is observed when substrate concentration is increased while enzyme concentration is held constant?
What is observed when substrate concentration is increased while enzyme concentration is held constant?
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What happens to enzymes when pH levels deviate significantly from their optimal range?
What happens to enzymes when pH levels deviate significantly from their optimal range?
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What aspect of enzyme specificity is characterized by an enzyme acting only on similar substrates with a specific functional group?
What aspect of enzyme specificity is characterized by an enzyme acting only on similar substrates with a specific functional group?
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What will likely happen to enzyme activity if the enzyme concentration is increased while substrate concentration remains constant?
What will likely happen to enzyme activity if the enzyme concentration is increased while substrate concentration remains constant?
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In the induced fit model, how does the active site interact with the substrate?
In the induced fit model, how does the active site interact with the substrate?
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Which type of specificity is illustrated by an enzyme that catalyzes hydrolysis of peptide bonds regardless of the rest of the molecular structure?
Which type of specificity is illustrated by an enzyme that catalyzes hydrolysis of peptide bonds regardless of the rest of the molecular structure?
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What effect do uncompetitive inhibitors have on both Vmax and Km?
What effect do uncompetitive inhibitors have on both Vmax and Km?
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How does the presence of a noncompetitive inhibitor affect the enzyme-substrate complex?
How does the presence of a noncompetitive inhibitor affect the enzyme-substrate complex?
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Which of the following statements about competitive inhibitors is true?
Which of the following statements about competitive inhibitors is true?
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What defines negative allosteric regulation?
What defines negative allosteric regulation?
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What is the primary role of an allosteric site on an enzyme?
What is the primary role of an allosteric site on an enzyme?
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Which statement correctly describes binding in allosteric regulation?
Which statement correctly describes binding in allosteric regulation?
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How do uncompetitive inhibitors uniquely interact with enzyme kinetics?
How do uncompetitive inhibitors uniquely interact with enzyme kinetics?
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What distinguishes competitive inhibition from other types of inhibition concerning Km?
What distinguishes competitive inhibition from other types of inhibition concerning Km?
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In which scenario will an allosteric site lead to a decrease in enzyme activity?
In which scenario will an allosteric site lead to a decrease in enzyme activity?
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What does the presence of differing y-intercepts on a Lineweaver-Burke plot indicate in the case of noncompetitive inhibition?
What does the presence of differing y-intercepts on a Lineweaver-Burke plot indicate in the case of noncompetitive inhibition?
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What is the mechanism by which penicillin acts on bacteria?
What is the mechanism by which penicillin acts on bacteria?
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What condition may be suggested by elevated levels of lactate dehydrogenase (LDH) in blood tests?
What condition may be suggested by elevated levels of lactate dehydrogenase (LDH) in blood tests?
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Which drug targets the enzyme xanthine oxidase?
Which drug targets the enzyme xanthine oxidase?
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Which enzyme is activated by tissue plasminogen activator (TPA) to dissolve blood clots?
Which enzyme is activated by tissue plasminogen activator (TPA) to dissolve blood clots?
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Which enzyme is used in the treatment of acute lymphocytic leukemia?
Which enzyme is used in the treatment of acute lymphocytic leukemia?
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What is the primary function of enzymes in biological reactions?
What is the primary function of enzymes in biological reactions?
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Which statement accurately describes the active site of an enzyme?
Which statement accurately describes the active site of an enzyme?
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Which of the following is a characteristic of enzymes?
Which of the following is a characteristic of enzymes?
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What are ribozymes?
What are ribozymes?
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What is the significance of the coenzyme in a holoenzyme?
What is the significance of the coenzyme in a holoenzyme?
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Why are enzymes considered catalysts in biological reactions?
Why are enzymes considered catalysts in biological reactions?
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What role do R-groups of amino acids play in enzymes?
What role do R-groups of amino acids play in enzymes?
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What term is used to describe the protein part of a conjugated enzyme?
What term is used to describe the protein part of a conjugated enzyme?
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Which of the following enzymes are classified as oxidoreductases?
Which of the following enzymes are classified as oxidoreductases?
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What is the primary biochemical activity of hydrolases?
What is the primary biochemical activity of hydrolases?
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Which class of enzymes is responsible for adding or removing functional groups from substrates?
Which class of enzymes is responsible for adding or removing functional groups from substrates?
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What defines the nomenclature of enzymes?
What defines the nomenclature of enzymes?
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Which enzyme is known for the hydrolysis of ester linkages in lipids?
Which enzyme is known for the hydrolysis of ester linkages in lipids?
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What type of reaction do lyases catalyze?
What type of reaction do lyases catalyze?
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Which enzyme class would include kinases?
Which enzyme class would include kinases?
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Which type of enzyme is involved in the removal of ammonia (NH3) from a substrate?
Which type of enzyme is involved in the removal of ammonia (NH3) from a substrate?
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What is the main function of isomerases in biochemical activity?
What is the main function of isomerases in biochemical activity?
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Which suffix is commonly associated with digestive enzymes?
Which suffix is commonly associated with digestive enzymes?
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What effect does competitive inhibition have on the maximum rate of an enzyme-catalyzed reaction?
What effect does competitive inhibition have on the maximum rate of an enzyme-catalyzed reaction?
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Which value indicates a higher affinity of an enzyme for its substrate?
Which value indicates a higher affinity of an enzyme for its substrate?
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Which type of inhibition involves a substance that binds to the active site of an enzyme?
Which type of inhibition involves a substance that binds to the active site of an enzyme?
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What does an increased Km value signify in the presence of a competitive inhibitor?
What does an increased Km value signify in the presence of a competitive inhibitor?
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What is the primary characteristic of reversible non-competitive inhibition?
What is the primary characteristic of reversible non-competitive inhibition?
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What does Vmax represent in the context of enzyme kinetics?
What does Vmax represent in the context of enzyme kinetics?
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What defines an irreversible inhibitor?
What defines an irreversible inhibitor?
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In the context of enzyme inhibition, what does 'turnover number' refer to?
In the context of enzyme inhibition, what does 'turnover number' refer to?
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What is typically true of both competitive and non-competitive inhibition?
What is typically true of both competitive and non-competitive inhibition?
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Which characteristic is specific to competitive inhibition compared to non-competitive inhibition?
Which characteristic is specific to competitive inhibition compared to non-competitive inhibition?
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What effect do noncompetitive inhibitors have on Vmax and Km?
What effect do noncompetitive inhibitors have on Vmax and Km?
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What characteristic is true for uncompetitive inhibition?
What characteristic is true for uncompetitive inhibition?
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How does positive allosteric regulation affect enzyme activity?
How does positive allosteric regulation affect enzyme activity?
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What is the role of an allosteric site on an enzyme?
What is the role of an allosteric site on an enzyme?
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What type of Lineweaver-Burk plot is observed in uncompetitive inhibition?
What type of Lineweaver-Burk plot is observed in uncompetitive inhibition?
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What happens to Km in the presence of a noncompetitive inhibitor?
What happens to Km in the presence of a noncompetitive inhibitor?
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Which statement accurately describes negative allosteric regulation?
Which statement accurately describes negative allosteric regulation?
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Which of the following is a characteristic of competitive inhibitors?
Which of the following is a characteristic of competitive inhibitors?
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For uncompetitive inhibition, what is the effect of the inhibitor?
For uncompetitive inhibition, what is the effect of the inhibitor?
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Which characteristic differentiates uncompetitive inhibition from other forms of inhibition?
Which characteristic differentiates uncompetitive inhibition from other forms of inhibition?
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What therapeutic application does Streptokinase serve?
What therapeutic application does Streptokinase serve?
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Which enzyme is targeted by antifolates like methotrexate in cancer treatment?
Which enzyme is targeted by antifolates like methotrexate in cancer treatment?
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What is the primary role of lactate dehydrogenase (LDH) in the context of myocardial infarction?
What is the primary role of lactate dehydrogenase (LDH) in the context of myocardial infarction?
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Which enzyme does TPA activate to facilitate the dissolution of blood clots?
Which enzyme does TPA activate to facilitate the dissolution of blood clots?
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Which of the following drugs inhibits the enzyme xanthine oxidase and is used for treating gout?
Which of the following drugs inhibits the enzyme xanthine oxidase and is used for treating gout?
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What indicates that enzymes are not consumed during chemical reactions?
What indicates that enzymes are not consumed during chemical reactions?
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What defines the specificity of an enzyme?
What defines the specificity of an enzyme?
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Which statement accurately describes the properties of enzymes?
Which statement accurately describes the properties of enzymes?
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How do active sites of enzymes contribute to their function?
How do active sites of enzymes contribute to their function?
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What are ribozymes characterized by?
What are ribozymes characterized by?
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Which component of a conjugated enzyme is responsible for enhancing its activity?
Which component of a conjugated enzyme is responsible for enhancing its activity?
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Which class of enzymes is responsible for catalyzing redox reactions?
Which class of enzymes is responsible for catalyzing redox reactions?
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What is the role of the active site in an enzyme's function?
What is the role of the active site in an enzyme's function?
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What type of reaction do hydrolases catalyze?
What type of reaction do hydrolases catalyze?
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Which enzyme is involved in the transfer of phosphate groups?
Which enzyme is involved in the transfer of phosphate groups?
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What distinguishes the apoenzyme from other enzyme components?
What distinguishes the apoenzyme from other enzyme components?
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What is the primary activity of lyases?
What is the primary activity of lyases?
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Which enzyme is classified under transferases?
Which enzyme is classified under transferases?
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What describes the function of isomerases?
What describes the function of isomerases?
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Which of the following enzymes is specifically associated with hydrolyzing ester linkages?
Which of the following enzymes is specifically associated with hydrolyzing ester linkages?
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Which enzyme class includes pepsin and chymotrypsin?
Which enzyme class includes pepsin and chymotrypsin?
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What is a common feature of dehydratases?
What is a common feature of dehydratases?
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Which term refers to enzymes like oxidase and reductase?
Which term refers to enzymes like oxidase and reductase?
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Which type of enzyme specificity allows an enzyme to act only on a particular type of chemical bond, regardless of the rest of the molecular structure?
Which type of enzyme specificity allows an enzyme to act only on a particular type of chemical bond, regardless of the rest of the molecular structure?
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What is the primary distinction between the Lock & Key Model and the Induced Fit Model of enzyme action?
What is the primary distinction between the Lock & Key Model and the Induced Fit Model of enzyme action?
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How does temperature specifically affect enzyme kinetics within physiological ranges?
How does temperature specifically affect enzyme kinetics within physiological ranges?
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Which factor regarding substrate concentration is true for enzyme-catalyzed reactions?
Which factor regarding substrate concentration is true for enzyme-catalyzed reactions?
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What characterizes absolute specificity in enzymes?
What characterizes absolute specificity in enzymes?
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In which situation would an enzyme likely experience denaturation due to pH changes?
In which situation would an enzyme likely experience denaturation due to pH changes?
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Which of the following statements correctly describes the enzyme-substrate complex?
Which of the following statements correctly describes the enzyme-substrate complex?
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Which enzyme specificity is exemplified by enzymes acting on similar substrates that share a specific functional group?
Which enzyme specificity is exemplified by enzymes acting on similar substrates that share a specific functional group?
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What is the primary outcome of increased enzyme concentration in reactions where the substrate concentration is held constant?
What is the primary outcome of increased enzyme concentration in reactions where the substrate concentration is held constant?
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What characteristic distinguishes noncompetitive inhibitors from other types of enzyme inhibitors?
What characteristic distinguishes noncompetitive inhibitors from other types of enzyme inhibitors?
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In the context of uncompetitive inhibition, how does the inhibitor affect the enzyme kinetics?
In the context of uncompetitive inhibition, how does the inhibitor affect the enzyme kinetics?
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What is the key mechanism of action for allosteric inhibitors?
What is the key mechanism of action for allosteric inhibitors?
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Which statement best explains the concept of positive allosteric regulation?
Which statement best explains the concept of positive allosteric regulation?
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What is the effect of noncompetitive inhibition on the Lineweaver-Burk plot compared to a control reaction?
What is the effect of noncompetitive inhibition on the Lineweaver-Burk plot compared to a control reaction?
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What distinguishes negative allosteric regulation from uncompetitive inhibition?
What distinguishes negative allosteric regulation from uncompetitive inhibition?
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How does an uncompetitive inhibitor affect the enzyme's ability to convert substrate into product?
How does an uncompetitive inhibitor affect the enzyme's ability to convert substrate into product?
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Which of the following best describes competitive inhibition?
Which of the following best describes competitive inhibition?
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Which property indicates that an enzyme can be regulated by allosteric effectors?
Which property indicates that an enzyme can be regulated by allosteric effectors?
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What role does an allosteric site play in enzyme function?
What role does an allosteric site play in enzyme function?
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Which enzyme's inhibition is specifically responsible for the bactericidal effect of Penicillins?
Which enzyme's inhibition is specifically responsible for the bactericidal effect of Penicillins?
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What is the main therapeutic application of Tissue plasminogen activator (TPA)?
What is the main therapeutic application of Tissue plasminogen activator (TPA)?
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Which drug targets xanthine oxidase to manage a specific condition?
Which drug targets xanthine oxidase to manage a specific condition?
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Which enzyme's activity is suggested to indicate a myocardial infarction when present in elevated blood levels?
Which enzyme's activity is suggested to indicate a myocardial infarction when present in elevated blood levels?
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For which condition is Asparaginase primarily used as a treatment?
For which condition is Asparaginase primarily used as a treatment?
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What primarily determines the specificity of enzymes for their substrates?
What primarily determines the specificity of enzymes for their substrates?
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Which statement about enzymes is NOT true?
Which statement about enzymes is NOT true?
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What is the term for the combination of an apoenzyme and its cofactor?
What is the term for the combination of an apoenzyme and its cofactor?
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Which of the following correctly describes ribozymes?
Which of the following correctly describes ribozymes?
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What is the role of the active site on an enzyme?
What is the role of the active site on an enzyme?
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What is the significance of enzymes being considered biocatalysts?
What is the significance of enzymes being considered biocatalysts?
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How do enzymes facilitate chemical reactions?
How do enzymes facilitate chemical reactions?
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Which property of enzymes allows for their substantial catalytic power?
Which property of enzymes allows for their substantial catalytic power?
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What is indicated by a higher Km value for an enzyme?
What is indicated by a higher Km value for an enzyme?
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If a competitive inhibitor is introduced to an enzyme reaction, which of the following statements is true?
If a competitive inhibitor is introduced to an enzyme reaction, which of the following statements is true?
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What happens to the turnover number of an enzyme if it becomes non-functional?
What happens to the turnover number of an enzyme if it becomes non-functional?
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How do reversible non-competitive inhibitors affect enzyme activity?
How do reversible non-competitive inhibitors affect enzyme activity?
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Which parameter in the Michaelis-Menten equation reflects the maximum rate of an enzyme-catalyzed reaction?
Which parameter in the Michaelis-Menten equation reflects the maximum rate of an enzyme-catalyzed reaction?
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In competitive inhibition, increasing the substrate concentration can overcome the inhibitor's effect. Why is this?
In competitive inhibition, increasing the substrate concentration can overcome the inhibitor's effect. Why is this?
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What type of inhibition is characterized by a substance permanently binding to an enzyme, leading to a loss of activity?
What type of inhibition is characterized by a substance permanently binding to an enzyme, leading to a loss of activity?
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What does Vmax tell you about an enzyme's performance under substrate saturation conditions?
What does Vmax tell you about an enzyme's performance under substrate saturation conditions?
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Why is Km considered an important measure in enzyme kinetics?
Why is Km considered an important measure in enzyme kinetics?
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What role does the Lineweaver-Burke plot play in understanding competitive inhibition?
What role does the Lineweaver-Burke plot play in understanding competitive inhibition?
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What is the primary effect of noncompetitive inhibitors on enzyme kinetics?
What is the primary effect of noncompetitive inhibitors on enzyme kinetics?
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How do uncompetitive inhibitors affect enzyme kinetics on a Lineweaver-Burk plot?
How do uncompetitive inhibitors affect enzyme kinetics on a Lineweaver-Burk plot?
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What characterizes positive allosteric regulation of enzymes?
What characterizes positive allosteric regulation of enzymes?
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Which statement is true regarding the characteristics of allosteric enzymes?
Which statement is true regarding the characteristics of allosteric enzymes?
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In the context of competitive inhibitors, which statement is accurate?
In the context of competitive inhibitors, which statement is accurate?
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Which describes the mechanism of uncompetitive inhibition?
Which describes the mechanism of uncompetitive inhibition?
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How does negative allosteric regulation affect enzyme activity?
How does negative allosteric regulation affect enzyme activity?
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What is the defining feature of the allosteric site on an enzyme?
What is the defining feature of the allosteric site on an enzyme?
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What is the result of a noncompetitive inhibitor on the enzyme-substrate complex?
What is the result of a noncompetitive inhibitor on the enzyme-substrate complex?
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What role does the allosteric site serve in enzyme function?
What role does the allosteric site serve in enzyme function?
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Which type of enzyme specificity is exhibited by catalase?
Which type of enzyme specificity is exhibited by catalase?
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In the Induced Fit Model, what occurs when the substrate binds to the enzyme?
In the Induced Fit Model, what occurs when the substrate binds to the enzyme?
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What happens to enzyme activity when temperature increases within the optimal range?
What happens to enzyme activity when temperature increases within the optimal range?
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Which specificity allows an enzyme to act on similar substrates with specific functional groups?
Which specificity allows an enzyme to act on similar substrates with specific functional groups?
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What defines the saturation point of an enzyme-catalyzed reaction?
What defines the saturation point of an enzyme-catalyzed reaction?
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What characteristic pH range is most conducive for enzyme activity?
What characteristic pH range is most conducive for enzyme activity?
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Which type of bonds are specifically hydrolyzed by phosphatases?
Which type of bonds are specifically hydrolyzed by phosphatases?
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How does increased enzyme concentration affect reaction rates with a constant substrate concentration?
How does increased enzyme concentration affect reaction rates with a constant substrate concentration?
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What is a key factor in enzyme specificity that allows them to differentiate between stereoisomers?
What is a key factor in enzyme specificity that allows them to differentiate between stereoisomers?
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What is the role of synthetases in biochemical reactions?
What is the role of synthetases in biochemical reactions?
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What is the mechanism by which Penicillin exerts its antibiotic effect?
What is the mechanism by which Penicillin exerts its antibiotic effect?
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In which condition is Tissue plasminogen activator (TPA) most effectively used?
In which condition is Tissue plasminogen activator (TPA) most effectively used?
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Which drug is designed to target xanthine oxidase for treating a specific condition?
Which drug is designed to target xanthine oxidase for treating a specific condition?
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What condition is associated with increased levels of lactate dehydrogenase (LDH) in the blood?
What condition is associated with increased levels of lactate dehydrogenase (LDH) in the blood?
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Which enzyme is inhibited by antifolates in cancer therapy?
Which enzyme is inhibited by antifolates in cancer therapy?
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Which statement accurately describes the roles of coenzymes in enzymatic reactions?
Which statement accurately describes the roles of coenzymes in enzymatic reactions?
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What is the significance of the active site in enzyme function?
What is the significance of the active site in enzyme function?
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Which of the following best describes the term 'apoenzyme'?
Which of the following best describes the term 'apoenzyme'?
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Which characteristic of enzymes allows them to demonstrate high specificity for substrates?
Which characteristic of enzymes allows them to demonstrate high specificity for substrates?
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Which factor does NOT generally influence the catalytic power of enzymes?
Which factor does NOT generally influence the catalytic power of enzymes?
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What distinguishes ribozymes from traditional enzymes?
What distinguishes ribozymes from traditional enzymes?
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Which statement best describes the relationship between enzymes and activation energy?
Which statement best describes the relationship between enzymes and activation energy?
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How does the presence of enzymes affect the equilibrium of a reaction?
How does the presence of enzymes affect the equilibrium of a reaction?
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Which class of enzymes is responsible for catalyzing redox reactions?
Which class of enzymes is responsible for catalyzing redox reactions?
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What is the primary function of transferases?
What is the primary function of transferases?
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Which suffix is commonly used for enzymes that catalyze the hydrolysis of connections in proteins?
Which suffix is commonly used for enzymes that catalyze the hydrolysis of connections in proteins?
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Which enzyme class includes enzymes like lipase and nuclease?
Which enzyme class includes enzymes like lipase and nuclease?
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Which of the following enzymes would catalyze the removal of ammonia from a substrate?
Which of the following enzymes would catalyze the removal of ammonia from a substrate?
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The term 'mutase' refers to which type of enzyme activity?
The term 'mutase' refers to which type of enzyme activity?
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Which of the following correctly describes lyases in biochemical reactions?
Which of the following correctly describes lyases in biochemical reactions?
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What type of biochemical reaction do oxidases facilitate?
What type of biochemical reaction do oxidases facilitate?
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Which option denotes the enzyme activity associated with the prefix 'chymo-'?
Which option denotes the enzyme activity associated with the prefix 'chymo-'?
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Which class of enzymes would you expect to perform isomerization changes within a molecule?
Which class of enzymes would you expect to perform isomerization changes within a molecule?
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What effect does a competitive inhibitor have on the rate of an enzyme-catalyzed reaction when substrate concentration is increased?
What effect does a competitive inhibitor have on the rate of an enzyme-catalyzed reaction when substrate concentration is increased?
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What does an increased Km value indicate about an enzyme's interaction with its substrate in the presence of a competitive inhibitor?
What does an increased Km value indicate about an enzyme's interaction with its substrate in the presence of a competitive inhibitor?
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Which statement is true regarding the Vmax of an enzyme-catalyzed reaction when subjected to competitive inhibition?
Which statement is true regarding the Vmax of an enzyme-catalyzed reaction when subjected to competitive inhibition?
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In the context of enzyme kinetics, what aspect of the Michaelis-Menten equation is not affected by a competitive inhibitor?
In the context of enzyme kinetics, what aspect of the Michaelis-Menten equation is not affected by a competitive inhibitor?
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What is one result of an enzyme becoming non-functional due to denaturation?
What is one result of an enzyme becoming non-functional due to denaturation?
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How does an uncompetitive inhibitor affect the enzyme kinetics?
How does an uncompetitive inhibitor affect the enzyme kinetics?
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Which of the following best describes irreversible inhibition of an enzyme?
Which of the following best describes irreversible inhibition of an enzyme?
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How does a lower Km value affect the rate of an enzymatic reaction?
How does a lower Km value affect the rate of an enzymatic reaction?
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What is the main impact of a noncompetitive inhibitor on an enzyme reaction?
What is the main impact of a noncompetitive inhibitor on an enzyme reaction?
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What is the effect of positive allosteric regulation on enzyme activity?
What is the effect of positive allosteric regulation on enzyme activity?
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In the context of the Michaelis-Menten kinetics, what does Vmax represent?
In the context of the Michaelis-Menten kinetics, what does Vmax represent?
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What characterizes the lines produced in a Lineweaver-Burk plot for uncompetitive inhibition?
What characterizes the lines produced in a Lineweaver-Burk plot for uncompetitive inhibition?
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Which of the following statements is true regarding reversible non-competitive inhibition?
Which of the following statements is true regarding reversible non-competitive inhibition?
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What is the primary site for effector molecules to bind in an allosteric enzyme?
What is the primary site for effector molecules to bind in an allosteric enzyme?
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What does the Lineweaver-Burke plot illustrate about enzyme kinetics?
What does the Lineweaver-Burke plot illustrate about enzyme kinetics?
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Why does Km remain unchanged in the presence of a noncompetitive inhibitor?
Why does Km remain unchanged in the presence of a noncompetitive inhibitor?
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What distinguishes negative allosteric regulation from other enzyme regulatory mechanisms?
What distinguishes negative allosteric regulation from other enzyme regulatory mechanisms?
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Which statement accurately describes the binding characteristics of uncompetitive inhibitors?
Which statement accurately describes the binding characteristics of uncompetitive inhibitors?
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How does a noncompetitive inhibitor alter the Lineweaver-Burk plot?
How does a noncompetitive inhibitor alter the Lineweaver-Burk plot?
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What happens to the enzyme's Vmax when affected by an uncompetitive inhibitor?
What happens to the enzyme's Vmax when affected by an uncompetitive inhibitor?
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Study Notes
Enzymes
- Enzymes are biological catalysts that speed up the rate of thermodynamically favorable biological reactions.
- They accelerate reactions without altering the reaction equilibrium, being consumed in the overall reaction, and are required in small quantities.
- Enzymes are highly specific for their substrate, possessing active sites.
Enzyme Structure
- Enzymes are mostly three-dimensional globular proteins with tertiary and quaternary structure.
- Some RNA species enzymes are called Ribozymes.
Active Site
- The active site is a specialized region where a substrate can fit precisely, facilitating chemical reactions.
- The amino acids R-groups (side chains) in the active site contribute to the specific chemical environment that favors the reaction.
Substrate
- The substrate is the molecule that an enzyme reacts with and binds to the active site.
- Enzymes are specific to their substrates, determined by the active site.
Apoenzyme, Coenzyme, Holoenzyme
- Apoenzyme is the protein part of a conjugated enzyme.
- Coenzyme (Cofactor) is the non-protein part of a conjugated enzyme.
- Holoenzyme is the biochemically active conjugated enzyme, consisting of both the protein and non-protein parts.
Enzyme Nomenclature
- Enzymes are named according to the type of reaction they catalyze and/or their substrate.
- The suffix "ase" is often used for enzymes, with a prefix denoting the type of reaction the enzyme catalyzes (e.g., oxidase, hydrolase).
Major Classes of Enzymes
- Oxidoreductases: Catalyze oxidation/reduction reactions, acting on chemical groupings to add or remove hydrogen atoms. Examples: oxidase, reductase, dehydrogenase.
- Transferases: Transfer functional groups (e.g., methyl or phosphate) between donor and acceptor molecules. Examples: transaminases, kinases.
- Hydrolases: Catalyze the hydrolysis of various bonds, adding water across a bond. Examples: lipase, proteases, nucleases, carbohydrases, phosphatases.
- Lyases: Cleave various bonds by means other than hydrolysis and oxidation, adding or removing water, ammonia, or carbon dioxide across double bonds. Examples: dehydratases, decarboxylases, deaminases, hydratase.
- Isomerases: Catalyze isomerization changes within a single molecule. Examples: mutase reactions, racemases.
- Ligases: Join two molecules with covalent bonds, catalyzing reactions where two chemical groups are joined (or ligated) using energy from ATP. Examples: synthetases, carboxylases.
Factors Affecting Enzyme Activity
- Temperature: Increased temperature generally increases enzyme kinetics due to more collisions and increased reaction rate.
- pH: Most enzymes are active over a narrow pH range, with optimal activity at a specific pH (pHOPT). Changes in pH can lead to denaturation and loss of function.
- Substrate Concentration: Increased substrate concentration increases reaction rate until a saturation point is reached where the reaction rate remains constant despite further substrate increase.
- Enzyme Concentration: Increased enzyme concentration increases reaction rate, with a greater enzyme concentration resulting in a higher reaction rate.
Enzyme Inhibition
- Inhibition: A substance that slows down or stops the normal catalytic function of an enzyme.
-
Types of Inhibition:
- Reversible Competitive Inhibition: Inhibitor binds reversibly to the active site, competing with the substrate. Increasing substrate concentration can overcome inhibition.
- Reversible Non-competitive Inhibition: Inhibitor binds to a site other than the active site, changing the enzyme's conformation and reducing its activity. Increased substrate concentration cannot overcome inhibition.
- Irreversible Inhibition: Inhibitor binds irreversibly to the enzyme, permanently inactivating it.
Medical Applications of Enzymes
- Lactate dehydrogenase (LDH): Increased levels in the blood indicate myocardial infarction (heart attack).
- Tissue plasminogen activator (TPA): Activates plasminogen, which dissolves blood clots. Used in the treatment of MI.
Enzymes as Therapeutic Agents (Drugs)
- Streptokinase: Clot lysis in myocardial infarction, trauma, and bleeding.
- Asparaginase: Acute lymphocytic leukemia.
- Adenosine deaminase: Severe combined immunodeficiency syndrome (SCID).
Enzymes as Drug Targets
- Dihydrofolate reductase: Antifolates such as methotrexate (cancer) and pyrimethamine (protozoa, malaria).
- Xanthine oxidase: Allopurinol (hyperuricemia, gout).
- Thymidylate synthase: 5-Fluorouracil & 5-fluorodeoxyuridine (cancer).
- Glycopeptide transpeptidase: Antibiotics, penicillin.
- HIV-Reverse transcriptase: 3′-azido-2′,3′-dideoxythymidine (AZT).
- HIV & SARS proteases: Ritonavir, saquinavir (clinical trial phase).
Michaelis-Menten Equation
- Describes the relationship between the rate of an enzyme-catalyzed reaction and the substrate concentration.
Km and Vmax Values
- Km: A measure of an enzyme's affinity for its substrate. Lower Km indicates a higher affinity, and higher Km indicates a lower affinity.
- Vmax: The maximum rate of an enzyme-catalyzed reaction. It is determined by the enzyme's turnover number (substrate molecules converted to product per unit time).
Lineweaver-Burke Plot for Competitive Inhibition
- Competitive inhibitors do not change the Vmax of enzyme reactions.
- They increase the apparent Km value because they bind reversibly to the active site.
- Increasing substrate concentration can overcome their inhibition.
- Unchanged Vmax and increased Km reflect the effects of competitive inhibition.
What are Enzymes?
- Enzymes are biocatalysts that accelerate the rate of thermodynamically favorable biological reactions.
- Their catalytic power can be thousands to millions of times faster than non-catalyzed reactions.
Importance of Enzymes
- Enzymes are essential for virtually all biological processes.
- They act as catalysts, speeding up reactions without being consumed in the process.
Activation Energy
- It's the minimum amount of energy required for a reaction to occur.
- Enzymes lower activation energy, making reactions proceed faster.
Properties of Enzymes
- Most enzymes are three-dimensional globular proteins.
- Some special RNA species act as enzymes and are called Ribozymes.
General Properties of Enzymes
- Enzymes accelerate reactions but don't alter the reaction equilibrium.
- They are not consumed during reactions.
- They are required in small quantities.
- Enzymes exhibit high catalytic power.
- They show specificity for their substrates.
- Enzymes possess active sites.
Active Site
- It's a specialized region on an enzyme where the substrate binds.
- Provides optimal conditions for substrate conversion.
Substrate
- The molecule that an enzyme reacts with.
- Binds to the active site of an enzyme.
- Enzymes are specific to their substrates.
Enzyme Structure
- Enzymes can be simple proteins or conjugated proteins.
- Conjugated enzymes consist of an apoenzyme (protein part) and a coenzyme (non-protein part).
Enzyme Nomenclature
- Enzymes are named according to the type of reaction they catalyze or their substrate.
- Many digestive enzymes have the suffix "-in" (e.g., pepsin, trypsin).
- Most other enzymes have the suffix "-ase" (e.g., lactase, amylase, lipase).
Six Major Classes of Enzymes
- Oxidoreductases: Catalyze oxidation-reduction reactions.
- Transferases: Transfer functional groups between molecules.
- Hydrolases: Catalyze the hydrolysis of various bonds.
- Lyases: Cleave bonds by means other than hydrolysis and oxidation.
- Isomerases: Catalyze isomerization within a single molecule.
- Ligases: Join two molecules with covalent bonds.
Enzyme-Substrate Complex
- When a substrate binds to an enzyme's active site, a temporary Enzyme-Substrate Complex forms.
- This complex facilitates the chemical reaction.
Lock & Key Model
- Proposes that the active site of an enzyme has a rigid shape complementary to the substrate.
- Similar to a key fitting into a lock.
Induced Fit Model
- Recognizes that enzymes are flexible and can change shape upon substrate binding.
- The active site adjusts its shape to accommodate the substrate.
Specificity of Enzymes
- Enzymes display various levels of specificity for their substrates:
- Absolute Specificity: Enzyme acts on only one specific substrate.
- Group Specificity: Enzyme acts on similar substrates with a specific functional group.
- Linkage Specificity: Enzyme acts on a specific type of chemical bond, regardless of the rest of the molecule.
- Stereochemical Specificity: Enzyme distinguishes between stereoisomers (e.g. L-amino acids vs. D-amino acids).
Factors Affecting Enzymes
- Temperature: Enzyme activity generally increases with temperature until an optimal point is reached. Beyond that, heat denatures the enzyme and reduces activity.
- pH: Each enzyme has an optimal pH range. Small changes in pH can lead to denaturation and loss of activity.
- Substrate Concentration: Enzyme activity increases with substrate concentration until saturation is reached. At saturation, further increases in substrate concentration have no effect.
- Enzyme Concentration: As enzyme concentration increases, so does the reaction rate.
Michaelis-Menten Equation
- Describes the relationship between reaction rate and substrate concentration.
- Explains how reaction rate increases initially but levels off due to enzyme saturation.
Km and Vmax Values
- Km: A measure of an enzyme's affinity for its substrate. Lower Km indicates higher affinity.
- Vmax: The maximum rate of an enzyme-catalyzed reaction. It's determined by the enzyme's turnover number.
Enzyme Inhibition
- A substance that slows down or stops the normal catalytic function of an enzyme by binding to the enzyme.
- Competitive Inhibition: Inhibitor binds to the active site, competing with the substrate. Can be overcome by increasing substrate concentration.
- Noncompetitive Inhibition: Inhibitor binds to a site other than the active site, changing the enzyme's conformation and reducing its activity. Not affected by increasing substrate concentration.
- Uncompetitive Inhibition: Inhibitor binds only to the enzyme-substrate complex. Decreases both Vmax and Km.
Lineweaver-Burke Plot
- Used to graphically represent enzyme kinetics and analyze different types of inhibition.
- X-axis: 1/[S] (reciprocal of substrate concentration)
- Y-axis: 1/V (reciprocal of reaction rate)
Allosteric Site
- It's a regulatory site on an enzyme, distinct from the active site, where effector molecules can bind.
- Positive Allosteric Regulation: Binding of the effector increases enzyme activity.
- Negative Allosteric Regulation: Binding of the effector decreases enzyme activity.
Enzyme Definition and Nomenclature
- Enzymes are biological catalysts that speed up chemical reactions without being consumed in the process.
- Enzymes are named based on the type of reaction they catalyze and/or their substrate.
- Most enzymes end in "-ase" (e.g., lactase, amylase, lipase).
- Some digestive enzymes end in "-in" (e.g., pepsin, trypsin, chymotrypsin).
- Prefixes denote the type of reaction the enzyme catalyzes (e.g., oxidase for redox reactions, hydrolase for hydrolysis).
6 Major Classes of Enzymes
- Oxidoreductases: Catalyze oxidation-reduction reactions (e.g., oxidase, reductase, dehydrogenase).
- Transferases: Transfer functional groups between molecules (e.g., transaminases, kinases).
- Hydrolases: Catalyze hydrolysis reactions by adding water across a bond (e.g., lipase, protease, nuclease, carbohydrases, phosphatases).
- Lyases: Cleave bonds using mechanisms other than hydrolysis or oxidation (e.g., dehydratases, decarboxylases, deaminases, hydratase).
- Isomerases: Catalyze isomerization changes within a single molecule (e.g., mutases, racemases, isomerases).
- Ligases: Join two molecules with covalent bonds using ATP energy (e.g., synthetases, carboxylases).
Enzyme-Substrate Complex
- When a substrate binds to an enzyme's active site, an enzyme-substrate complex is formed.
- This complex allows the substrate to undergo its chemical reaction much faster.
Lock and Key Model of Enzyme Action
- The active site has a rigid shape, like a lock, and the substrate fits into it like a key.
- The substrate binds to the active site, undergoes its reaction, and then the products are released.
Induced Fit Model of Enzyme Action
- Enzymes are flexible and constantly change their shape.
- The shape of the active site adapts to accommodate the substrate upon binding.
Specificity of Enzymes
- Absolute specificity: The enzyme catalyzes a particular reaction for only one substrate (e.g., catalase for hydrogen peroxide, urease for urea).
- Group specificity: The enzyme acts only on similar substrates with a specific functional group (e.g., carboxypeptidase on amino acids, hexokinase on hexoses).
- Linkage specificity: The enzyme acts on a particular type of chemical bond, regardless of the rest of the molecular structure (e.g., phosphatases on phosphate-ester bonds, chymotrypsin on peptide bonds).
- Stereochemical specificity: The enzyme can distinguish between stereoisomers (e.g., L-amino-acid oxidase catalyzes reactions of L-amino acids, not D-amino acids).
Factors Affecting Enzymes
- Temperature: Increased temperature generally increases enzyme activity until an optimal temperature is reached, after which activity decreases due to denaturation.
- pH: Most enzymes have an optimal pH range, outside of which their activity decreases due to changes in protein structure.
- Substrate concentration: Increased substrate concentration increases reaction rate until the active sites are saturated, after which the rate plateaus.
- Enzyme concentration: Increased enzyme concentration increases reaction rate.
Michaelis-Menten Equation
- Describes the relationship between substrate concentration and reaction rate.
Km and Vmax Values
- Km: A measure of an enzyme's affinity for its substrate. Lower Km indicates higher affinity.
- Vmax: The maximum rate of an enzyme-catalyzed reaction, determined by the enzyme's turnover number.
Enzyme Inhibition
- Competitive Inhibition: A reversible inhibitor that binds to the active site, competing with the substrate. Can be overcome by increasing substrate concentration.
- Noncompetitive Inhibition: A reversible inhibitor that binds to a site other than the active site, reducing the enzyme's efficiency. Cannot be overcome by increasing substrate concentration.
- Uncompetitive Inhibition: A reversible inhibitor that binds to the enzyme-substrate complex, decreasing both Vmax and Km.
Allosteric Site
- A regulatory site on an enzyme that binds effectors, which can either activate or inhibit enzyme activity.
- Positive Allosteric Regulation: The effector increases the enzyme's affinity for the substrate.
- Negative Allosteric Regulation: The effector decreases the enzyme's affinity for the substrate.
Drugs Inhibiting Enzyme Activity
- ACE Inhibitors: Inhibit angiotensin-converting enzyme, lowering blood pressure.
- Penicillin: Inhibits transpeptidase, weakening bacterial cell walls and killing bacteria.
Medical Uses Of Enzymes
- Lactate Dehydrogenase (LDH): Increased levels in blood can indicate myocardial infarction (heart attack).
- Tissue Plasminogen Activator (TPA): Activates plasminogen, dissolving blood clots and used to treat MI.
Therapeutic Uses of Enzymes
- Streptokinase: Used to break down blood clots in cases of myocardial infarction, trauma, or bleeding.
- Asparaginase: Used as an anti-cancer agent, particularly for acute lymphocytic leukemia.
- Adenosine Deaminase: Used to treat severe combined immunodeficiency syndrome (SCID).
Enzymes as Drug Targets
- Dihydrofolate Reductase: Targeted by antifolate drugs like methotrexate (cancer) and pyrimethamine (malaria).
- Xanthine Oxidase: Targeted by allopurinol for hyperuricemia and gout.
- Thymidylate Synthase: Targeted by anticancer drugs 5-fluorouracil and 5-fluorodeoxyuridine.
- Glycopeptide Transpeptidase: Targeted by antibiotics like penicillin.
- HIV-Reverse Transcriptase: Targeted by antiretroviral drugs like AZT.
- HIV and SARS Proteases: Targeted by antiviral drugs like ritonavir and saquinavir.
What are Enzymes?
- Enzymes are biocatalysts
- Enzymes increase the rate of biological, thermodynamically favorable reactions by thousands or millions of times
Importance of Enzymes
- No biological reactions work without enzymes
Activation Energy
- The minimum amount of energy required for a reaction to start
Properties of Enzymes
- Most enzymes are three-dimensional globular proteins
- Some enzymes are special RNA species called ribozymes
General Properties of Enzymes
- Enzymes speed up reactions without altering the equilibrium
- Enzymes are not used up in the reaction
- Small quantities of enzymes are required
- Enzymes have significant power for catalysis
- Enzymes are highly specific to their substrates
- Enzymes contain active sites
Active Site
- The active site of an enzyme is a specialized region where a substrate binds precisely
- This microenvironment facilitates and accelerates chemical reactions by providing optimal conditions for substrate conversion
- Active sites are made of amino acids' R-groups (side chains)
Substrate
- The substrate is the molecule that an enzyme reacts with
- The substrate binds to the active site of the enzyme and is the substance that is changed during a reaction
- Enzymes are specific to their substrates and the specificity is determined by the active site
Enzyme Structure
- Enzymes can have different levels of structure: primary, secondary, tertiary, and quaternary
Enzyme Definition
- Apoenzyme: The protein portion of a conjugated enzyme
- Coenzyme (Cofactor): The non-protein portion of a conjugated enzyme
- Holoenzyme: The biochemically active conjugated enzyme (includes both the protein and non-protein parts)
Enzyme Nomenclature
- Enzymes are named based on the reaction they catalyze or their substrate
- Many digestive enzymes have the suffix "-in" - ex. pepsin, trypsin, chymotrypsin
- Most other enzyme names end with "-ase" -- ex. lactase, amylase, lipase, protease
- The prefix of an enzyme name refers to the type of reaction:
- Oxidase: redox reaction
- Hydrolase: addition of water to break a component into two parts
6 Major Classes of Enzymes
- EC 1. Oxidoreductases
- Catalyze oxidation/reduction
- Oxidase: oxidation of substrate
- Reductase: reduction of substrate
- Dehydrogenase: introduction of a double bond by removing two hydrogen atoms
- Catalyze oxidation/reduction
- EC 2. Transferases
- Transfer functional groups (e.g. methyl or phosphate) between molecules
- Transaminases: transfer of an amino group
- Kinases: transfer of a phosphate group
- Transfer functional groups (e.g. methyl or phosphate) between molecules
- EC 3. Hydrolases
- Catalyze the hydrolysis of various bonds by adding water across a bond
- Lipase: hydrolysis of ester linkages in lipids
- Proteases: hydrolysis of amide linkages in proteins
- Nucleases: hydrolysis of sugar phosphate ester bonds in nucleic acids
- Carbohydrases: hydrolysis of glycosidic bonds in carbohydrates
- Phosphatases: hydrolysis of phosphate-ester bonds
- Catalyze the hydrolysis of various bonds by adding water across a bond
- EC 4. Lyases
- Cleave various bonds by means other than hydrolysis or oxidation
- Add water, ammonia, or carbon dioxide across double bonds or remove these elements to produce double bonds
- Dehydratases: removal of H2O from substrate
- Decarboxylases: removal of CO2 from substrate
- Deaminases: removal of NH3 from substrate
- Hydratase: addition of H2O to a substrate
- EC 5. Isomerases
- Catalyze isomerization changes within a single molecule
- Mutase reactions: shift chemical groups
- Racemases: convert D to L isomers or vice versa
- Catalyze isomerization changes within a single molecule
- EC 6. Ligases
- Catalyze the joining of two molecules, often coupled with the hydrolysis of ATP
Michaelis-Menten Equation
- Describes the relationship between the rate of an enzyme-catalyzed reaction and substrate concentration
Km and Vmax Values
-
Km is a measure of an enzyme's affinity for its substrate:
- A lower Km indicates higher affinity
- A higher Km indicates lower affinity
-
Vmax is the maximum rate of an enzyme reaction:
- It is determined by the enzyme's turnover number (substrate molecules converted per unit time)
Enzyme Inhibition
- A substance that slows down or stops the normal catalytic function of an enzyme by binding to it
- Three types of inhibition:
- Reversible competitive inhibition
- Reversible noncompetitive inhibition
- Irreversible inhibition
Competitive Inhibition
- The inhibitor binds reversibly to the active site of the enzyme
- Increasing substrate concentration can overcome this inhibition
- Unchanged Vmax but increased Km reflects the effects of competitive inhibition
Noncompetitive Inhibition
- The inhibitor binds to a site other than the active site
- The inhibitor reduces the concentration of the enzyme-substrate (ES) complex
- Vmax decreases, but Km remains unchanged
Uncompetitive Inhibition
- The inhibitor binds to the enzyme-substrate complex
- Decreases both Vmax and Km
- Cannot be reversed by increasing substrate concentration
Allosteric Site
- The regulatory site of an enzyme that binds to effector or non-substrate molecules
- Allosteric sites can activate or inhibit enzyme activity
Types of Allosteric Regulation
- Positive Allosteric Regulation: Binding of the effector increases enzyme activity by increasing its affinity to the substrate
- Negative Allosteric Regulation: Binding of the effector decreases enzyme activity by decreasing the affinity for the substrate
Drugs Inhibiting Enzyme Activity
- ACE Inhibitors: inhibit angiotensin-converting enzyme, lowers blood pressure
-
Penicillins: β-lactam antibiotics that inhibit transpeptidase
- Transpeptidase strengthens the cell wall of bacteria
- Penicillin weakens the cell wall, causing the bacteria to die
Medical Uses of Enzymes
- Lactate dehydrogenase (LDH): Increased levels in the blood indicate myocardial infarction (heart attack)
- Tissue plasminogen activator (TPA): Activates plasminogen, which dissolves blood clots. Used in MI treatment.
Enzymes as Therapeutic Agents (Drugs)
- Streptokinase: Clot lysis, in myocardial infarction, trauma, or bleeding
- Asparaginase: Acute lymphocytic leukemia
- Adenosine Deaminase: Severe combined immunodeficiency syndrome (SCID)
Enzymes as Drug Targets
- Dihydrofolate reductase: Antifolates like methotrexate (cancer) and pyrimethamine (protozoa & malaria)
- Xanthine oxidase: Allopurinol for hyperuricemia and gout
- Thymidylate synthase: 5-Fluorouracil and 5-fluorodeoxyuridine (cancer)
- Glycopeptide transpeptidase: Antibiotics, penicillin
- HIV-Reverse transcriptase: 3’-azido-2’,3’-dideoxythymidine (AZT)
- HIV & SARS proteases: Ritonavir and saquinavir (clinical trials)
Enzymes
- Enzymes are biocatalysts that increase the rate of thermodynamically favorable biological reactions.
- They can accelerate reactions by several thousand to million folds.
- Enzymes are essential for life and are involved in virtually every biological process.
Importance of Enzymes
- Enzymes are biological catalysts, meaning they speed up reactions without being consumed in the process.
- They are crucial for vital processes like metabolism, digestion, and DNA replication.
Activation Energy
- Activation energy is the minimum energy required for a reaction to occur.
- Enzymes lower the activation energy, making reactions happen faster.
Properties of Enzymes
- Most enzymes are globular proteins with tertiary and quaternary structures.
- Some special RNA molecules called ribozymes also have enzymatic activity.
General Properties of Enzymes
- Enzymes accelerate reactions but do not alter the equilibrium of the reaction.
- They are not consumed during the reaction.
- They are required in small quantities.
- Enzymes have high catalytic power, meaning they can accelerate reactions significantly.
- Enzymes are highly specific for their substrates.
- Enzymes have active sites.
Active Site
- The active site is a specific region on an enzyme where the substrate binds.
- The active site provides an optimal environment for the substrate to be converted into a product.
Substrate
- The substrate is the molecule that an enzyme reacts with.
- It binds to the active site of the enzyme.
- The specificity of an enzyme is determined by the active site, which fits only specific substrates.
Apoenzyme, Coenzyme, Holoenzyme
- An apoenzyme is the protein part of a conjugated enzyme.
- A coenzyme is the non-protein part of a conjugated enzyme.
- A holoenzyme is the biochemically active conjugated enzyme formed by the combination of an apoenzyme and a coenzyme.
Enzyme-Substrate Complex
- When a substrate binds to the active site of an enzyme, an enzyme-substrate complex is formed temporarily.
- This complex allows the substrate to undergo its chemical reaction much faster.
Lock and Key Model of Enzyme Action
- The active site has a rigid shape (the lock), and the substrate (the key) must fit exactly into it.
- This model explains the specificity of enzymes.
Induced Fit Model of Enzyme Action
- Many enzymes are flexible and change shape constantly.
- The shape of the active site changes to accommodate the substrate, fitting it like a hand in a glove.
Specificity of Enzymes
- Enzymes can be categorized based on their specificity:
- Absolute Specificity: An enzyme catalyzes a particular reaction for only one substrate.
- Group Specificity: An enzyme acts only on similar substrates that have a specific functional group.
- Linkage Specificity: An enzyme acts on a particular type of chemical bond, regardless of the rest of the molecular structure.
- Stereochemical Specificity: An enzyme can distinguish between stereoisomers.
Factors Affecting Enzymes
-
Various factors can affect the activity of an enzyme:
- Temperature: Increasing temperature increases the rate of an enzyme-catalyzed reaction until a certain point, after which the enzyme denatures and loses activity.
- pH: Each enzyme has an optimal pH range for activity.
- Substrate Concentration: Increasing substrate concentration increases the reaction rate until the enzyme becomes saturated.
- Enzyme Concentration: Increasing enzyme concentration increases the reaction rate.
Michaelis-Menten Equation
- The Michaelis-Menten equation describes the relationship between the rate of an enzyme-catalyzed reaction and the substrate concentration.
Km and Vmax Values
- Km: The Michaelis constant, which is a measure of an enzyme's affinity for its substrate. A lower Km indicates a higher affinity, while a higher Km indicates a lower affinity.
- Vmax: The maximum rate of an enzyme-catalyzed reaction. It is determined by the enzyme's turnover number (the number of substrate molecules converted to product per unit time).
Enzyme Inhibition
-
A substance that slows down or stops the normal catalytic function of an enzyme by binding to the enzyme. Types of inhibition:
- Reversible Competitive Inhibition: The inhibitor competes with the substrate for the active site.
- Reversible Non-competitive Inhibition: The inhibitor binds to a site on the enzyme other than the active site, altering the enzyme's shape and reducing its activity.
- Irreversible Inhibition: The inhibitor binds permanently to the enzyme, causing permanent inactivation.
Allosteric Site
- The allosteric site is a regulatory site on an enzyme where effectors bind to either activate or inhibit the enzyme's activity.
Types of Allosteric Regulation
- Positive Allosteric Regulation: Binding of the effector increases the enzyme's affinity for the substrate, leading to an increase in enzyme activity.
- Negative Allosteric Regulation: Binding of the effector decreases the enzyme's affinity for the substrate, leading to a decrease in enzyme activity.
Drugs Inhibiting Enzyme Activity
-
Many drugs work by inhibiting specific enzymes to treat various diseases:
- ACE Inhibitors: Inhibit Angiotensin-Converting Enzyme (ACE) to lower blood pressure.
- Penicillin: Inhibits transpeptidase, an enzyme that strengthens bacterial cell walls, leading to bacterial death.
Medical Uses of Enzymes
- Enzymes play important roles in diagnosis and treatment of various diseases:
- Lactate Dehydrogenase (LDH): Increased levels in blood indicate myocardial infarction (heart attack).
- Tissue Plasminogen Activator (TPA): Activates plasminogen, an enzyme that dissolves blood clots, used in the treatment of myocardial infarction (heart attack).
Enzymes as Therapeutic Agents
-
Some enzymes can be used as therapeutic agents (drugs) to treat various medical conditions:
- Streptokinase: Used for clot lysis in myocardial infarction, trauma, and bleedings.
- Asparaginase: Used for acute lymphocytic leukemia.
- Adenosine Deaminase: Used for treatment of Severe Combined Immuno-deficiency Syndrome (SCID).
Enzymes as Drug Targets
-
Many enzymes are targeted by drugs to treat various diseases:
- Dihydrofolate Reductase: Targeted by antifolates like methotrexate (cancer) and pyrimethamine (protozoa, malaria).
- Xanthine Oxidase: Targeted by allopurinol for hyperuricemia and gout.
- Thymidylate Synthase: Targeted by 5-fluorouracil and 5-fluorodeoxyuridine for cancer treatment.
- Glycopeptide Transpeptidase: Targeted by antibiotics like penicillin.
- HIV-Reverse Transcriptase: Targeted by 3'-azido-2',3'-dideoxythymidine (AZT).
- HIV & SARS Proteases: Targeted by ritonavir and saquinavir (clinical trial phase).
Enzymes: Biocatalysts
- Enzymes are biological catalysts that accelerate the rate of thermodynamically favorable reactions by several thousand to million folds.
- Enzymes are essential for all biological processes.
- Catalysts are chemical substances that speed up reactions but are not used up in the process.
- The activation energy of a reaction is the required input of energy to make a reaction start.
Enzyme Characteristics
- Most enzymes are globular proteins with tertiary and quaternary structures.
- Some enzymes are RNA molecules known as ribozymes.
- Enzymes accelerate reactions without altering the equilibrium.
- They are not consumed in the reaction and are required in small quantities.
- Enzymes exhibit high specificity for their substrates.
- Enzymes possess active sites, specialized regions where substrates bind precisely.
- The active site facilitates and accelerates chemical reactions by providing optimal conditions for substrate conversion.
Enzyme Nomenclature
- Enzymes are named according to the type of reaction they catalyze and/or their substrate.
- The suffix "ase" is commonly used for enzyme names, with a prefix indicating the type of reaction catalyzed (e.g., oxidase, hydrolase).
Enzyme Classification
- Enzymes are categorized into six major classes based on their catalytic activity:
Oxidoreductases
- Catalyze oxidation-reduction reactions
- Act on various chemical groupings to add or remove hydrogen atoms.
- Examples: oxidases, reductases, dehydrogenases.
Transferases
- Catalyze the transfer of functional groups between donor and acceptor molecules.
- Examples: transaminases, kinases.
Hydrolases
- Catalyze the hydrolysis of various bonds by adding water across the bond.
- Degrade complex molecules into simpler units.
- Examples: lipases, proteases, nucleases, carbohydrases, phosphatases.
Lyases
- Catalyze the cleavage of various bonds by means other than hydrolysis and oxidation.
- Can add elements like water, ammonia, or carbon dioxide across double bonds or remove them to produce double bonds.
- Examples: dehydratases, decarboxylases, deaminases, hydratases.
Isomerases
- Catalyze isomerization changes within a single molecule.
- Rearrange atoms within a molecule without changing the overall composition.
- Examples: mutases.
Ligases
- Join two molecules together, often with the help of ATP.
- Form new bonds between molecules.
- Examples: synthetases.
Enzyme Activity
- The Michaelis-Menten equation describes the relationship between the rate of an enzyme-catalyzed reaction and the substrate concentration.
Enzyme Kinetics
-
Km: A measure of an enzyme's affinity for its substrate.
- Lower Km indicates a higher affinity.
- Higher Km indicates a lower affinity.
-
Vmax: The maximum rate of an enzyme-catalyzed reaction.
- Determined by the enzyme's turnover number (the number of substrate molecules converted to product per unit time).
Enzyme Inhibition
- Inhibition: A substance that slows down or stops the normal catalytic function of an enzyme by binding to the enzyme.
-
Reversible Inhibition: The inhibitor binds reversibly to the enzyme and can be overcome by increasing substrate concentration.
- Competitive Inhibition: The inhibitor binds to the active site of the enzyme, competing with the substrate for binding.
- Noncompetitive Inhibition: The inhibitor binds to a site other than the active site, altering both the enzyme's affinity for the substrate and its ability to catalyze the reaction.
- Uncompetitive Inhibition: The inhibitor binds only to the enzyme-substrate complex, decreasing both Vmax and Km.
- Irreversible Inhibition: The inhibitor binds permanently to the enzyme, inactivating it.
Allosteric Control
-
Allosteric Site: A regulatory site on an enzyme that binds to effector molecules.
- Positive Allosteric Regulation: The effector increases the enzyme's affinity for the substrate, leading to an increase in enzyme activity.
- Negative Allosteric Regulation: The effector decreases the enzyme's affinity for the substrate, leading to a decrease in enzyme activity.
Medical Uses of Enzymes
- Therapeutic Agents: Enzymes can be used as drugs for various diseases.
- Diagnostic Markers: Enzyme levels in blood can be used to diagnose certain conditions.
- Drug Targets: Enzymes are often targets for drugs designed to treat diseases.
Examples of Enzyme Inhibition by Drugs
- ACE Inhibitors: Inhibit the angiotensin-converting enzyme (ACE), lowering blood pressure.
- Penicillin: Inhibits transpeptidase, an enzyme that strengthens bacterial cell walls, leading to weakened cell walls and bacterial death.
Examples of Enzyme Use in Medicine
- Lactate Dehydrogenase (LDH): High levels in blood indicate myocardial infarction (heart attack).
- Tissue Plasminogen Activator (TPA): Dissolves blood clots by activating plasminogen. Used in the treatment of MI.
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Explore the fascinating world of enzymes in this quiz, covering their role as biological catalysts and their unique structures. Test your knowledge on enzyme specificity, active sites, and the differences between apoenzymes and coenzymes. Perfect for students studying biochemistry or related fields.