Enzyme Naming and Classification
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Questions and Answers

What type of enzyme catalyzes the formation of isomers by rearranging the existing atoms in a molecule?

  • Isomerase (correct)
  • Synthetase
  • Mutase
  • Ligase

Which enzyme catalyzes the conversion of citrate into isocitrate?

  • Citrate synthase
  • Isomerase (correct)
  • Glutamine synthetase
  • y-Glutamylcysteine synthetase

Which of the following enzymes requires ATP to catalyze the joining of two substrates?

  • Synthetase (correct)
  • Mutase
  • Ligase (correct)
  • Isomerase

What type of reaction do mutases catalyze?

<p>Movement of chemical groups between atoms (A)</p> Signup and view all the answers

Which enzyme is responsible for the conversion of L-glutamate to L-glutamine?

<p>Glutamine synthetase (C)</p> Signup and view all the answers

Which enzyme class is responsible for the transfer of functional groups?

<p>Transferases (D)</p> Signup and view all the answers

What type of reaction do hydrolases primarily perform?

<p>Cleave bonds with water addition (D)</p> Signup and view all the answers

Which of the following enzymes catalyzes oxidation-reduction reactions?

<p>Oxidoreductases (A)</p> Signup and view all the answers

Which enzyme class performs ATP-dependent condensations?

<p>Ligases (C)</p> Signup and view all the answers

In which class would you categorize dehydrogenases?

<p>Oxidoreductases (A)</p> Signup and view all the answers

What do oxygenases do in biochemical reactions?

<p>Incorporate both oxygen atoms into an acceptor (C)</p> Signup and view all the answers

Which enzyme class does not involve the transfer of electrons?

<p>Hydrolases (D)</p> Signup and view all the answers

What action is associated with the class of enzymes known as ligases?

<p>Condensation of molecules using ATP (D)</p> Signup and view all the answers

What does the suffix '-ase' typically signify when naming enzymes?

<p>It denotes the enzyme acts on a specific substrate. (D)</p> Signup and view all the answers

Which of the following is an example of an enzyme classified as an oxidoreductase?

<p>Lactate dehydrogenase (B)</p> Signup and view all the answers

What is the primary function of enzymes classified under EC 2?

<p>To transfer functional groups between substrates. (A)</p> Signup and view all the answers

In the EC classification system, what does the first element of the code signify?

<p>The enzyme class. (C)</p> Signup and view all the answers

Which class of enzymes is primarily involved in the process of hydrolysis?

<p>Hydrolases (A)</p> Signup and view all the answers

What type of reaction do lyases (EC 4) typically catalyze?

<p>Addition or removal of groups to form double bonds. (C)</p> Signup and view all the answers

What do the four elements in the Enzyme Commission number represent?

<p>Type of reaction, group, substrate, and enzyme. (C)</p> Signup and view all the answers

Which enzyme classification would 'Lactate dehydrogenase' belong to?

<p>Oxidoreductases (B)</p> Signup and view all the answers

What type of enzyme is aspartate aminotransferase (AST)?

<p>Transferase (C)</p> Signup and view all the answers

Which of the following enzymes is a hydrolase that cleaves peptide bonds in proteins?

<p>Chymotrypsin (D)</p> Signup and view all the answers

What reaction is catalyzed by the enzyme pyrophosphatase?

<p>Cleavage of phosphate from pyrophosphate (B)</p> Signup and view all the answers

Which of the following statements is true about lyases?

<p>They can remove water to form double bonds. (C)</p> Signup and view all the answers

Which enzyme is specifically known for catalyzing the formation of a carbon-carbon bond?

<p>Citrate synthase (D)</p> Signup and view all the answers

What type of bonds do proteases primarily cleave?

<p>Peptide bonds (B)</p> Signup and view all the answers

Which of the following best describes the function of aldolases?

<p>They cleave C-C bonds. (D)</p> Signup and view all the answers

Which enzyme is involved in the hydrolysis of starch?

<p>Amylase (D)</p> Signup and view all the answers

What type of reaction do transferases catalyze?

<p>Group transfer reactions (A)</p> Signup and view all the answers

Which enzyme is specifically mentioned as catalyzing the conversion of xanthine to uric acid?

<p>Xanthine oxidase (D)</p> Signup and view all the answers

What is required by all transaminases for their catalytic function?

<p>Pyridoxal phosphate (D)</p> Signup and view all the answers

Which chemical compound is produced along with H2O2 when xanthine is converted by xanthine oxidase?

<p>Uric acid (B)</p> Signup and view all the answers

What happens to alanine aminotransferase (ALT) levels in the blood following liver damage?

<p>Increase significantly (B)</p> Signup and view all the answers

Which of the following statements about transfer reactions is true?

<p>Transaminases transfer nitrogen groups from amino acids. (B)</p> Signup and view all the answers

Which of the following is not a type of transferase mentioned?

<p>Isomerase (B)</p> Signup and view all the answers

What is the primary function of the enzyme xanthine oxidase?

<p>To convert hypoxanthine to xanthine and further to uric acid (C)</p> Signup and view all the answers

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Flashcards

Isomerases

Enzymes that catalyze the rearrangement of atoms within a molecule, creating isomers.

Mutases

Enzymes that catalyze the transfer of a functional group, such as a phosphate group, from one molecule to another.

Ligases

Enzymes that catalyze the joining of two molecules, often requiring the input of energy from ATP.

Enolase

An enzyme that catalyzes the conversion of pyruvate to phosphoenolpyruvate, a key step in gluconeogenesis.

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Citrate Synthase

An enzyme that catalyzes the condensation reaction between acetyl-CoA and oxaloacetate to form citrate, the first step in the citric acid cycle.

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Transferase

An enzyme that catalyzes the transfer of a functional group from one molecule to another.

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Kinase

A transferase that catalyzes the transfer of a high-energy phosphate group.

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Glycosyltransferase

A transferase that catalyzes the transfer of a carbohydrate residue.

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Acyltransferase

A transferase that catalyzes the transfer of a fatty acyl group.

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Transamination

A type of group transfer reaction where a nitrogen group from an amino acid is transferred to an alpha-keto acid.

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Transaminases or Aminotransferases

Enzymes that catalyze transamination reactions.

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Pyridoxal Phosphate

A coenzyme required for all transaminases.

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Alanine Aminotransferase (ALT) or Glutamate Pyruvate Transaminase (GPT)

An aminotransferase found in liver tissue, measured in blood samples for diagnostic purposes.

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What enzyme transfers a phosphate group from ATP to glucose's 6th carbon?

An enzyme that catalyzes the transfer of a phosphate group from ATP to the 6th carbon atom of glucose.

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What are oxidoreductases?

Enzymes that catalyze oxidation-reduction reactions; they transfer electrons between molecules.

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What are dehydrogenases?

A subclass of oxidoreductases that remove hydrogen atoms from a substrate, transferring them to an electron carrier like NAD+.

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What is NAD+?

A coenzyme involved in electron transfer reactions, often used by dehydrogenases.

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What are transferases?

Enzymes that catalyze the transfer of functional groups from one molecule to another.

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What are kinases?

A subclass of transferases that specifically transfer phosphate groups.

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What are hydrolases?

Enzymes that catalyze the breaking of bonds using water.

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What are lyases?

Enzymes that catalyze the breaking of bonds without using water, often forming a double bond.

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Hydrolases

A type of enzyme that breaks down molecules by adding water.

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Proteases

A type of hydrolase that breaks down proteins into amino acids.

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Decarboxylases

Lyases that catalyze the breaking of a carbon-carbon bond, often releasing carbon dioxide.

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Dehydratases

A type of lyase that removes water from two adjacent carbon atoms, forming a double bond.

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Synthases

A type of lyase that joins two molecules together by forming a new carbon-carbon bond.

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Thiolases

A type of lyase that catalyzes the breaking of a carbon-carbon bond by using a sulfur-containing molecule.

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Aldolase

An enzyme that breaks down fructose 1,6-bisphosphate into dihydroxyacetone phosphate and glyceraldehyde 3-phosphate.

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Early Enzyme Naming

In the beginning, enzymes were given nonsensical names by their discoverers, like 'pepsin' or 'trypsin'. These names didn't reveal anything about the enzyme's function or what it acted upon.

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The '-ase' Rule

A systematic approach to name enzymes emerged. The suffix '-ase' was added to the name of the substrate, for example, 'lipase' works on lipids and 'nuclease' acts on nucleic acids.

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Double Duty Names

Some names describe both the substrate and the function of the enzyme. For instance, 'lactate dehydrogenase' indicates that the enzyme oxidizes lactate.

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Enzyme Classification

A standardized classification system for enzymes was developed in 1961, dividing enzymes into six main classes based on the reactions they catalyze.

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EC Number

The 'EC' number is the code that identifies an enzyme. It's like a unique address for the enzyme. It's broken into four parts with specific information.

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EC Number: Class

The first part of the EC number tells you the class of the enzyme. There are six main classes.

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EC Number: Subclasses

The second and third parts of the EC number give you specific information about the enzyme's function and details about the group affected.

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EC Number: Specific Enzyme or Substrate

The final, fourth part of the EC number is the most specific, indicating the exact enzyme or its substrate.

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Study Notes

Enzyme Naming

  • Early enzyme names were arbitrary, given by discoverers, e.g., pepsin, trypsin, chymotrypsin.
  • These names didn't convey information about the enzyme's function or substrate.
  • A suffix "-ase" was commonly added to the substrate name, e.g., lipase acts on lipids, nuclease on nucleic acids.
  • Alternatively, names describe enzyme function, e.g., oxidases, decarboxylases, dehydrogenases.
  • Some names describe both substrate and function, e.g., lactate dehydrogenase oxidizes lactate.

Enzyme Classification

  • In 1961, the Enzyme Commission (EC) under the International Union of Pure and Applied Chemistry (IUPAC) introduced a system for classifying enzymes.
  • Enzymes are grouped into six major classes based on the reaction they catalyze.
  • Each class is further divided into subclasses, sub-subclasses, and specific subclasses, giving a unique four-part code for each enzyme (e.g., EC (0.0.0.0)).
  • The code uses four numbers separated by periods. The first number indicates the class; the second and third the subclass and sub-subclass; the fourth the specific enzyme within that sub-subclass.

Enzyme Classes

  • EC 1. Oxidoreductases: These enzymes catalyze oxidation-reduction reactions. In these reactions, one substrate gains electrons (reduction) while another loses electrons (oxidation).
  • Examples include dehydrogenases, oxidases, and peroxidases. Often involve transfer of hydride (H-) ions or hydrogen atoms. Electron transfer often uses coenzymes like NAD+ /NADH as electron acceptors.
  • EC 2. Transferases: These enzymes move a functional group from one molecule to another. If the transferred group is a high-energy phosphate, the enzyme is a kinase. If it is a carbohydrate residue, it's a glycosyltransferase; If it is a fatty acyl group, it is an acyltransferase.
  • EC 3. Hydrolases: These enzymes catalyze the hydrolysis of a chemical bond. They cleave bonds using water, breaking a substrate.
  • Examples include amidases, phosphatases, peptidases (protein-digesting), proteases (cleave peptide bonds), lipases (for lipid hydrolysis), amylases (for carbohydrate hydrolysis).
  • EC 4. Lyases: These enzymes cleave C-C, C-O, or C-N bonds without water or oxidation. They typically form double bonds.
  • Examples include aldolases, dehydrogenases, and synthases.
  • EC 5. Isomerases: These enzymes rearrange the atoms within a molecule to form an isomer, a molecule with the same chemical formula but a different structure.
  • Examples include mutases.
  • EC 6. Ligases (Synthetases): These enzymes join two substrates together. These reactions require energy from ATP or a similar source.
  • Examples include carboxylases.

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Description

This quiz explores the fundamental principles behind enzyme naming and classification as established by the Enzyme Commission. Understand how enzymes are categorized based on their function and the historical context of their naming conventions. Test your knowledge of the various classes and subclassifications of enzymes.

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