DNA Replication Quiz
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Questions and Answers

During DNA replication, which enzyme is responsible for initially synthesizing a short RNA sequence on both the leading and lagging strands?

  • DNA ligase
  • DNA polymerase I
  • Helicase
  • Primase (correct)

The leading strand in DNA replication is synthesized in short fragments away from the replication fork.

False (B)

On the lagging strand, short DNA fragments called _________ are synthesized discontinuously.

okazaki fragments

Which of the following enzymes is responsible for joining Okazaki fragments together during lagging strand synthesis?

<p>DNA ligase (D)</p> Signup and view all the answers

In what direction does DNA polymerase III synthesize new DNA strands?

<p>5' to 3'</p> Signup and view all the answers

Match each type of RNA with its function:

<p>mRNA = Carries genetic information from DNA to the ribosome rRNA = A component of ribosomes tRNA = Transports amino acids to the ribosome for protein synthesis</p> Signup and view all the answers

What is the relationship between the two polynucleotide strands in a DNA molecule?

<p>Antiparallel with opposite 5' to 3' directionality. (B)</p> Signup and view all the answers

What is the role of DNA polymerase I in DNA replication?

<p>Replacing RNA primers with DNA nucleotides. (C)</p> Signup and view all the answers

In the conservative model of DNA replication, the original DNA molecule is completely conserved, and the new DNA molecule consists of two newly synthesized strands.

<p>True (A)</p> Signup and view all the answers

Briefly describe the semiconservative model of DNA replication.

<p>Each new DNA molecule consists of one original strand and one newly synthesized strand.</p> Signup and view all the answers

Only one primer is required for DNA polymerase III to synthesize the lagging strand.

<p>False (B)</p> Signup and view all the answers

According to Chargaff's rule, the percentage of adenine (A) bases is approximately equal to the percentage of ______ bases in a DNA molecule.

<p>thymine</p> Signup and view all the answers

Which of the following models of DNA replication results in a daughter molecule containing a mix of parental and newly synthesized DNA segments interspersed on both strands?

<p>Dispersive model (C)</p> Signup and view all the answers

Match the level of DNA packaging with its corresponding diameter:

<p>DNA double helix = 2 nm Nucleosome = 10 nm 30-nm fiber = 30 nm Looped domains = 300 nm</p> Signup and view all the answers

Given a sequence of one DNA strand is 5'-GATTACA-3', what would be the sequence of the complementary strand, considering the antiparallel nature of DNA?

<p>3'-CTAATGT-5' (C)</p> Signup and view all the answers

RNA molecules, like DNA, typically exist as a double helix structure.

<p>False (B)</p> Signup and view all the answers

Which chemical linkage connects adjacent nucleotides in a single strand of DNA?

<p>Phosphodiester linkage (C)</p> Signup and view all the answers

The 5' end of a DNA strand terminates with a hydroxyl (-OH) group attached to the sugar molecule.

<p>False (B)</p> Signup and view all the answers

According to Chargaff's rule, if a double-stranded DNA molecule has 20% adenine (A), what percentage of guanine (G) would be expected?

<p>30%</p> Signup and view all the answers

In the DNA double helix, the ______ forms the sides of the 'ladder', while the nitrogenous bases form the 'rungs'.

<p>sugar-phosphate backbone</p> Signup and view all the answers

Match the following scientists with their contribution to understanding DNA structure:

<p>Watson &amp; Crick = Developed the double helix model of DNA Chargaff = Established base pairing rules (A=T, C=G)</p> Signup and view all the answers

What type of bond stabilizes the double helix structure of DNA between complementary base pairs?

<p>Hydrogen bond (C)</p> Signup and view all the answers

DNA strands in a double helix run parallel to each other, meaning their 5' to 3' directionality is the same.

<p>False (B)</p> Signup and view all the answers

In the structure of a DNA nucleotide, which component contains nitrogen?

<p>Nitrogenous base (B)</p> Signup and view all the answers

Which of the following best describes the primary advantage of an operon?

<p>It enables genes to function as a single transcription unit, allowing for coordinated control. (C)</p> Signup and view all the answers

The regulatory gene within an operon directly codes for the structural genes.

<p>False (B)</p> Signup and view all the answers

What would occur if the operator region of the lac operon were deleted?

<p>The repressor protein would not be able to bind, and the structural genes would be constitutively transcribed.</p> Signup and view all the answers

In the lac operon, the enzyme __________ hydrolyzes lactose into glucose and galactose.

<p>ß-Galactosidase</p> Signup and view all the answers

Match the following components of the lac operon with their respective functions:

<p>Promoter = Binding site for RNA polymerase Operator = Binding site for repressor protein Structural genes = Code for enzymes involved in lactose metabolism Regulatory gene (<em>lacI</em>) = Codes for the repressor protein</p> Signup and view all the answers

What is the role of allolactose in the regulation of the lac operon?

<p>It acts as an inducer and binds to the repressor protein. (B)</p> Signup and view all the answers

The lacA gene codes for permease, which facilitates the uptake of lactose into the cell.

<p>False (B)</p> Signup and view all the answers

In the presence of both glucose and lactose, which carbon source will E. coli preferentially use, and how does this affect the lac operon?

<p><em>E. coli</em> will preferentially use glucose, repressing the <em>lac</em> operon. (D)</p> Signup and view all the answers

What is the direct effect of allolactose binding to the repressor protein in the lac operon system?

<p>It changes the repressor's shape, preventing it from binding to the operator. (C)</p> Signup and view all the answers

In the absence of lactose, the repressor protein of the lac operon is active and prevents RNA polymerase from binding to the promoter.

<p>True (A)</p> Signup and view all the answers

Why is the lac operon considered a negative control system?

<p>Because the operon is switched off by the active form of a repressor protein.</p> Signup and view all the answers

Enzymes involved in the lactose pathway are considered ______ enzymes because their synthesis is induced by a chemical signal.

<p>inducible</p> Signup and view all the answers

Match the following components of the lac operon with their function:

<p>Repressor Protein = Binds to the operator to prevent transcription Operator = Region of DNA where the repressor binds Promoter = Region where RNA polymerase binds to initiate transcription Allolactose = Inducer that inactivates the repressor protein</p> Signup and view all the answers

Which of the following is the most significant advantage of the lac operon system for bacterial cells?

<p>It prevents the waste of resources by producing enzymes only when lactose is available. (B)</p> Signup and view all the answers

A mutation in the lacI gene results in a non-functional repressor protein. What is the likely effect on the expression of the lac operon genes?

<p>The lac operon genes will be expressed constitutively (always on). (D)</p> Signup and view all the answers

Mutations in somatic cells can be passed on to offspring and future generations.

<p>False (B)</p> Signup and view all the answers

What is the direct consequence of a change in the sequence of bases in DNA?

<p>A change in the function of the protein. (B)</p> Signup and view all the answers

Large-scale mutations exclusively involve changes to a single nucleotide pair.

<p>False (B)</p> Signup and view all the answers

Which of the following is a type of point mutation?

<p>Single nucleotide-pair substitution (D)</p> Signup and view all the answers

A nucleotide-pair substitution that results in a codon coding for a different amino acid is called a ______ mutation.

<p>missense</p> Signup and view all the answers

Why does a silent mutation have no observable effect on the phenotype?

<p>The altered codon codes for the same amino acid. (D)</p> Signup and view all the answers

Match each type of mutation with its description:

<p>Silent mutation = Change in nucleotide sequence with no change in amino acid sequence Missense mutation = Change in nucleotide sequence resulting in a different amino acid Nonsense mutation = Change in nucleotide sequence that results in a stop codon Frameshift mutation = Insertion or deletion of nucleotide pairs, altering the reading frame</p> Signup and view all the answers

Insertions or deletions of nucleotide pairs do NOT usually cause frameshift mutations.

<p>False (B)</p> Signup and view all the answers

What is the immediate effect of a nonsense mutation on protein synthesis?

<p>premature termination</p> Signup and view all the answers

Flashcards

Antiparallel strands

Two DNA strands oriented in opposite 5' to 3' directions.

DNA double helix

A twisted ladder structure formed by two antiparallel polynucleotide strands

RNA structure

Consists of a single strand of nucleotides, unlike DNA's double helix.

Nucleotides

The building blocks of DNA, consisting of a sugar, phosphate group, and a nitrogenous base.

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Nucleosomes

DNA wrapped around histone proteins, forming the basic unit of DNA packaging.

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Sugar-phosphate backbone

The alternating chain of sugar and phosphate groups in the DNA structure.

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30-nm fiber

Hierarchical structure formed by the coiling of nucleosomes in DNA packaging.

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5' and 3' ends

The directionality of a DNA strand; 5' is where the phosphate group is, and 3' is where the hydroxyl group is.

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Chargaff’s rule

A genetic principle stating that A pairs with T and G pairs with C in DNA strands.

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Watson & Crick model

The double helix model of DNA proposed in 1953 by James Watson and Francis Crick.

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Semiconservative replication

DNA duplication process where each daughter DNA contains one old and one new strand.

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Chargaff’s rule

The principle that in DNA, the amount of adenine equals thymine and the amount of cytosine equals guanine.

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DNA replication models

Three hypotheses on DNA duplication: conservative, semiconservative, and dispersive.

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Hydrogen bonding

Weak bonds that hold together complementary nitrogenous bases in DNA.

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Phosphodiester linkage

The bond formed between two nucleotides through a phosphate group and a sugar.

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Operon

A group of genes functioning together under a single transcription unit.

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Components of an operon

Includes promoter, operator, and structural genes.

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Promoter

The binding site for RNA polymerase to start transcription.

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Operator

The on-off switch that regulates mRNA synthesis.

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Structural genes

Genes that code for enzymes involved in metabolism.

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Lac operon

Operon in E. coli that metabolizes lactose.

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Repressor protein

Protein that binds to the operator to inhibit transcription.

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Allolactose

Inducer of the lac operon formed from lactose.

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Leading Strand Synthesis

Continuous synthesis of DNA towards the replication fork using a single RNA primer.

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Lagging Strand Synthesis

Discontinuous synthesis of DNA away from the replication fork in Okazaki fragments.

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Okazaki Fragments

Short DNA segments synthesized on the lagging strand during DNA replication.

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Primase

An enzyme that synthesizes a short RNA primer for DNA synthesis initiation.

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DNA Polymerase III

Enzyme responsible for synthesizing new DNA strands in the 5' to 3' direction.

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RNA Primer

A short strand of RNA needed to initiate DNA synthesis for both strands.

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DNA Ligase

Enzyme that connects Okazaki fragments into a continuous DNA strand on the lagging strand.

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Types of RNA

Three main types: mRNA (messenger), rRNA (ribosomal), and tRNA (transfer) for protein synthesis.

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Transcription in lac operon

Produces a long mRNA strand from structural genes lac Z, lac Y, and lac A.

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Proteins from lac operon

The translation of mRNA produces ß-galactosidase, permease, and transacetylase for lactose metabolism.

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Role of allolactose

It binds to the repressor protein, inactivating it and allowing transcription.

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Repressor-operator complex

Formed when the repressor binds to the operator, blocking RNA polymerase access.

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Negative control in lac operon

The active repressor protein prevents gene transcription, keeping the operon off.

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Inducible operon

An operon that is normally off but can be turned on by a specific molecule.

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Mutation

A change in the nucleotide sequence of DNA, contributing to genetic diversity.

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Small-scale mutations

Mutations involving one or a few nucleotide pairs, including point mutations.

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Point mutation

A mutation that involves changes in a single nucleotide pair of a gene.

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Nucleotide-pair substitution

The replacement of one nucleotide pair with another, leading to possible mutations.

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Silent mutation

A change in nucleotide that does not alter the amino acid sequence produced.

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Missense mutation

A nucleotide substitution that results in a different amino acid being coded.

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Nonsense mutation

A mutation that converts an amino acid codon into a stop codon.

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Nucleotide-pair insertions

Addition of nucleotide pairs that may change the reading frame of mRNA.

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Frameshift mutation

Mutations caused by insertions or deletions that alter the reading frame during translation.

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Study Notes

Chapter 1: Genetic Inheritance & Genetic Control, Part 2

  • This chapter covers topics related to genetic inheritance and control, focusing on DNA structure, replication, protein synthesis (transcription and translation), mutation, and gene expression.

1. Terms in Genetics

  • Terms related to genetics were introduced.

2. Mendelian Genetics

  • Monohybrid inheritance: Describes inheritance patterns involving a single gene.
  • Dihybrid inheritance: Explains patterns for two genes.
  • Extensions of Mendelian Genetics: Addresses cases that don't follow the strict ratios of Mendel's laws.
  • Human Pedigree Analysis: Using family trees to track traits through generations.

3. Population Genetics

  • Terms in population genetics: Introduced relevant terms used in studying genetic diversity within populations.
  • Hardy-Weinberg equation: Defines conditions determining whether a population's genotype frequencies are changing.
  • Hardy-Weinberg equilibrium conditions: Specific conditions required for a population's genotype to remain constant.

4. DNA Structure and Replication

  • DNA double helix: Describes the double-stranded, helical structure of DNA.
  • Models of DNA replication: Explains various theoretical models, including the conservative, semi-conservative, and dispersive models.
  • Meselson and Stahl's experiment: This experiment provided evidence that DNA replication follows a semi-conservative model.
  • DNA replication: This process duplicates DNA.

5. Protein Synthesis: Transcription and Translation

  • Types of RNA: Briefly described the different types of RNA (mRNA, rRNA, and tRNA), emphasizing their essential roles in protein synthesis.
  • Basic principles of transcription & translation: Outlined fundamental processes involved in converting genetic code into proteins.
  • Genetic code: The set of rules that determines how codons are translated into amino acids.
  • Transcription of RNA: Detailed the process of creating RNA from a DNA template.
  • Modification of pre-mRNA in eukaryotes: Description of modification in mRNA before it exits the nucleus.
  • Translation: Processes involving converting the mRNA molecule sequence into the amino acid sequence.

6. Regulation of Gene Expression

  • Regulation of gene expression: The process of controlling which genes are active in a cell.
  • Components of an operon: Explaining the operon system, encompassing a promoter, operator, and multiple related structural genes.
  • Lactose operon (lac operon): Explains this bacterial gene regulatory system that controls the production of enzymes for lactose metabolism under different conditions.

7. Mutation

  • Mutation: Describes any change in the nucleotide sequence of DNA.
  • Small-scale mutations: Describes small nucleotide changes impacting a gene and their effect on the encoded protein.
  • Chromosome mutations: Outlined large-scale changes affecting the entire chromosome.
  • Human disorders due to chromosomal alteration: Examples of human conditions linked to chromosomal abnormalities were mentioned.

1.4. DNA Structure and Replication

  • DNA double helix: Discusses the fundamental double-helix structure.
  • Meselson-Stahl experiment: This experiment strongly supported the semi-conservative DNA replication model.

1.4.1 DNA Double Helix

  • DNA structure: A polymer of nucleotides with a sugar-phosphate backbone.
  • Phosphodiester linkages: Connects nucleotides.
  • DNA directionality: 5' to 3'.

1.4.3 Meselson-Stahl Experiment

  • Experiment details: Bacteria grown in mediums with heavy and light isotopes of nitrogen were used to track DNA replication.
  • Results supported semi-conservative model.

1.4.4 DNA Replication

  • Origin of replication: Location where DNA replication begins in circular chromosomes.
  • Replication bubble: The region where DNA is unwound during replication (eukaryotes).
  • Replication fork: The Y-shaped region of replication. Process in bacteria was discussed

1.4.2 DNA Replication Models

  • Overview of the three DNA replication models (conservative, semi-conservative, and dispersive).

1.5 Protein Synthesis: Transcription and Translation

  • Types of RNA and their roles.

1.5.1 Types of RNA

  • mRNA, rRNA, and tRNA

1.5.2 Basic Principles of Transcription and Translation

  • The synthesis of RNA using a DNA template or copying information from DNA to RNA.
  • The synthesis of a polypeptide using information in the mRNA.

1.5.3 Genetic Code

  • Codons in mRNA are read in the 5' → 3' direction.
  • Each codon specifies a particular amino acid.
  • Complementary DNA base triplets are known as codons.
  • Table of genetic code.

1.5.4 Transcription of RNA

  • Stages: Initiation, elongation, and termination.
  • RNA polymerase binds to the promoter region to initiate RNA transcription (eukaryotes).

1.5.5 Modification of Pre-mRNA in Eukaryotes

  • mRNA processing in Eukaryotes: Capping and polyadenylation.
  • RNA splicing: Removing introns and joining exons creates mature mRNA.

1.5.6 Translation: Building a Polypeptide

  • 3 Stages: Initiation, elongation, and termination.

1.5.7 Structure and Function of tRNA

  • tRNA is single stranded.
  • tRNA has an amino acid attachment site and an anticodon.
  • tRNA brings specific amino acids to the ribosome.

1.6 Regulation of Gene Expression

  • How prokaryotes and eukaryotes regulate gene expression.
  • Operon structure: Promoter, operator, and structural genes.
  • Lactose operon structure and function: How it controls lactose metabolism in bacteria.

1.7 Mutation

  • Changes in DNA nucleotide sequences are mutations.
  • Small-scale mutations: Substitutions, insertions, deletions.
  • Large-scale mutations: Deletions, duplications, inversions, translocations. Examples of human genetic diseases (e.g., Down syndrome, Klinefelter syndrome, Turner syndrome, and Cri du chat Syndrome) associated with chromosome mutations.

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