Biological Molecules Overview

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Questions and Answers

What describes the primary structure of a protein?

  • The folding of the polypeptide into a specific configuration.
  • The linear sequence of amino acids linked by peptide bonds. (correct)
  • The overall three-dimensional structure formed by R group interactions.
  • The aggregation of multiple polypeptide subunits.

Which structure of a protein is characterized by hydrogen bonds forming a repeating configuration?

  • Primary structure
  • Quaternary structure
  • Tertiary structure
  • Secondary structure (correct)

How many polypeptide chains are involved in the quaternary structure of collagen?

  • Three (correct)
  • Two
  • Four
  • Five

What is primarily responsible for the unique three-dimensional shape of a protein's tertiary structure?

<p>Interactions between R groups of amino acids. (D)</p> Signup and view all the answers

Which of the following pairs a type of secondary structure with a corresponding example?

<p>Alpha helix - keratin (A)</p> Signup and view all the answers

Which of the following classes of biological molecules are polymers?

<p>Both B and C (B)</p> Signup and view all the answers

What is the correct term for the reaction that forms polymers from monomers?

<p>Condensation (C)</p> Signup and view all the answers

Which statement about monosaccharides is true?

<p>They can form disaccharides through a glycosidic linkage. (C)</p> Signup and view all the answers

What distinguishes lipids from the other classes of biological macromolecules?

<p>They are not considered polymers. (B)</p> Signup and view all the answers

What type of linkage connects monosaccharides to form disaccharides?

<p>Glycosidic linkage (D)</p> Signup and view all the answers

Which reaction is the process by which polymers are broken down into monomers?

<p>Hydrolysis reaction (C)</p> Signup and view all the answers

Which of the following statements is FALSE regarding macromolecules?

<p>Proteins are primarily used for energy storage. (A)</p> Signup and view all the answers

What structural role does chitin play in biological organisms?

<p>Structural support in cell walls of fungi (D)</p> Signup and view all the answers

Which statement accurately describes lipids?

<p>Their unifying feature is their low affinity for water. (B)</p> Signup and view all the answers

What are the components of fats?

<p>Glycerol and fatty acids (C)</p> Signup and view all the answers

What distinguishes saturated fatty acids from unsaturated fatty acids?

<p>Saturated fatty acids have no double bonds in their carbon chains. (D)</p> Signup and view all the answers

What is the result of an ester linkage in the formation of fats?

<p>It joins fatty acids to glycerol creating a triglyceride. (D)</p> Signup and view all the answers

Why are lipids considered hydrophobic?

<p>They consist mostly of hydrocarbons. (B)</p> Signup and view all the answers

Which characteristic of unsaturated fatty acids affects their physical state at room temperature?

<p>Presence of double bonds makes them more liquid. (C)</p> Signup and view all the answers

What type of molecule is primarily formed from the combination of glycerol and three fatty acids?

<p>Triglyceride (B)</p> Signup and view all the answers

Which type of lipids is crucial for forming cell membranes?

<p>Phospholipids (A)</p> Signup and view all the answers

Which amino acid has a side chain that includes sulfur?

<p>Methionine (D)</p> Signup and view all the answers

Identify the amino acid that is classified as polar.

<p>Glycine (A)</p> Signup and view all the answers

Which of the following amino acids does not have a branched side chain?

<p>Glycine (C)</p> Signup and view all the answers

Which of the following statements about phenylalanine is true?

<p>It contains a phenyl group in its R-side chain. (D)</p> Signup and view all the answers

Select the amino acid known for forming unique cyclic structures.

<p>Proline (C)</p> Signup and view all the answers

Which amino acid is not typically associated with the formation of hydrophobic interactions?

<p>Serine (D)</p> Signup and view all the answers

Which amino acid is primarily responsible for the formation of hydrogen bonds in proteins?

<p>Threonine (B)</p> Signup and view all the answers

Which amino acid is considered essential in the human diet, meaning it must be obtained from food?

<p>Valine (D)</p> Signup and view all the answers

What distinguishes phospholipids from triglycerides?

<p>Phospholipids have one phosphate group. (C)</p> Signup and view all the answers

Which of the following correctly describes the function of proteins in a cell?

<p>Proteins account for more than 50% of the cell's dry mass. (A)</p> Signup and view all the answers

What is the role of R groups in amino acids?

<p>R groups provide unique properties to each amino acid. (A)</p> Signup and view all the answers

Which of the following does NOT describe the structure of phospholipids?

<p>They form a single layer in membranes. (B)</p> Signup and view all the answers

Which of the following statements is incorrect about cholesterol?

<p>Cholesterol is found only in plant cells. (B)</p> Signup and view all the answers

What type of bond links amino acids together in a polypeptide?

<p>Peptide bonds (D)</p> Signup and view all the answers

How do soaps and detergents relate to cholesterol and phospholipids?

<p>They are similar in being amphipathic molecules. (D)</p> Signup and view all the answers

Which of the following best describes the components of proteins?

<p>Proteins are polymers formed from amino acids. (C)</p> Signup and view all the answers

Why are phospholipids essential for cell membranes?

<p>They form a bilayer that is critical for membrane structure. (A)</p> Signup and view all the answers

Flashcards

Macromolecules

Large molecules composed of thousands of covalently connected atoms.

Polymer

A long molecule consisting of many similar building blocks.

Monomers

The repeating building blocks that make up polymers.

Dehydration Synthesis

A chemical reaction that forms a polymer by removing a water molecule from two monomers.

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Hydrolysis

A chemical reaction that breaks down a polymer by adding a water molecule.

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Monosaccharides

Simple sugars that serve as monomers for carbohydrates. Examples include glucose and fructose.

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Polysaccharides

Polymers of carbohydrates made up of more than two monosaccharides.

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Primary Structure

The simplest level of protein structure. It's a linear sequence of amino acids held together by peptide bonds.

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Secondary Structure

The folding or coiling of the polypeptide chain into a repeating configuration due to hydrogen bonds.

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Tertiary Structure

Overall three-dimensional shape of a polypeptide. It's formed by interactions between the side chains of amino acids.

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Quaternary Structure

Overall protein structure that arises from the aggregation of two or more polypeptide chains (tertiary subunits).

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Protein Shape and Function

A protein's specific shape determines its function.

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Chitin

A structural polysaccharide made up of repeating N-acetylglucosamine units.

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N-acetylglucosamine

A type of monomer that forms the building blocks of chitin.

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Lipids

A diverse group of hydrophobic molecules that are not polymers.

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Fatty acids and glycerol

The primary building blocks of fats.

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Glycerol

A three-carbon alcohol with a hydroxyl group attached to each carbon.

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Fatty acid

A long chain of carbons with a carboxyl group at one end.

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Triacylglycerol (or Triglyceride)

A type of fat formed by attaching three fatty acids to one glycerol molecule.

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Saturated fatty acid

A fatty acid with no double bonds between its carbon atoms.

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Unsaturated fatty acid

A fatty acid with one or more double bonds between its carbon atoms.

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Amino Acid

A molecule that serves as the building block for proteins. It is composed of a central carbon atom bonded to an amino group, a carboxyl group, a hydrogen atom, and a side chain (R-group).

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R-group

The unique chemical group attached to the central carbon atom of an amino acid. It determines the amino acid's properties (polar, non-polar, acidic, basic) and its role in protein structure and function.

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Polar Amino Acid

A type of amino acid whose R-group is attracted to water molecules due to its charge or polarity. Can form hydrogen bonds with water.

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Non-polar Amino Acid

A type of amino acid whose R-group is repelled by water due to its lack of charge and non-polar nature. Usually hydrophobic and prefers to associate with other non-polar molecules.

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Glycine

Glycine (Gly), a non-polar amino acid with the simplest R-group (just a hydrogen atom).

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Alanine

Alanine (Ala), a non-polar amino acid with a methyl group (CH3) as its R-group.

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Valine

Valine (Val), a non-polar amino acid with a branched chain (CH3) as its R-group.

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Leucine

Leucine (Leu), a non-polar amino acid with a branched chain (CH3) as its R-group.

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Isoleucine

Isoleucine (Ile), a non-polar amino acid with a branched chain (CH3) as its R-group.

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Methionine

Methionine (Met), a non-polar amino acid with a sulfur-containing R-group.

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What are phospholipids?

Phospholipids are a type of lipid that forms the cell membranes. They are composed of a glycerol molecule attached to two fatty acid chains and a phosphate group. This unique structure gives phospholipids a hydrophilic head and hydrophobic tails.

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How do phospholipids form cell membranes?

Phospholipids arrange themselves into a bilayer in cell membranes. The hydrophilic heads face outward towards the watery environment, while the hydrophobic tails face inwards, creating a barrier.

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What are steroids?

Steroids are lipids with a unique structure consisting of four fused carbon rings. They are distinct from fats and phospholipids.

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What is cholesterol?

Cholesterol is a type of steroid found in animal cell membranes. It is also a precursor for various hormones.

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Why are phospholipids and cholesterol amphipathic?

Both phospholipids and cholesterol have hydrophilic (water-loving) and hydrophobic (water-fearing) parts, making them amphipathic molecules. This dual nature is essential for their roles in membranes.

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What are proteins?

Proteins are large, complex molecules that are essential for nearly every function in a cell. They are made up of smaller units called amino acids.

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What are amino acids?

Amino acids are the monomers that make up proteins. They have a central carbon atom attached to an amino group (NH2), a carboxyl group (COOH), a hydrogen atom, and a variable side chain called the R group.

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What are polypeptides?

Polypeptides are chains of amino acids linked together by peptide bonds. These chains fold into complex 3D structures to form a functional protein.

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What are some functions of proteins?

Proteins have a wide variety of functions in cells, including structural support, transport, catalysis (enzymes), defense, and signaling.

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Why are proteins important?

Proteins are essential for life. They perform a vast array of functions that enable cells and organisms to survive and thrive.

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Study Notes

Biological Molecules Overview

  • All living things are made of four major classes of large biological molecules: carbohydrates, lipids, proteins, and nucleic acids.
  • Macromolecules are large molecules composed of thousands of covalently bonded atoms.

Polymers and Monomers

  • Polymers are long molecules made up of similar building blocks called monomers.
  • Carbohydrates, proteins, and nucleic acids are polymers.
  • Lipids are not polymers.

Synthesis and Breakdown of Polymers

  • Monomers are joined together by condensation reactions (also called dehydration synthesis) that remove a water molecule.
  • Polymers are broken down by hydrolysis reactions which add a water molecule.

Carbohydrates

  • Carbohydrates serve as fuel and building materials.
  • Simple carbohydrates are monosaccharides
  • Disaccharides are two monosaccharides joined by a glycosidic linkage.
  • Polysaccharides are polymers of monosaccharides.
  • Storage polysaccharides include glycogen (animals) and starch (plants).
  • Structural polysaccharides include cellulose (plant cell walls) and chitin (exoskeletons of arthropods and fungal cell walls).

Lipids

  • Lipids are a diverse group of hydrophobic molecules.
  • They do not form polymers.
  • Fats are constructed from glycerol and fatty acids (monomers).
  • Glycerol is a three-carbon alcohol.
  • Fatty acids have a carboxyl group and a hydrocarbon chain.
  • In a fat, three fatty acids are attached to glycerol by ester linkages, forming a triacylglycerol (or triglyceride).
  • Fatty acids vary in length and the number and location of double bonds.
    • Saturated fatty acids have no double bonds.
    • Unsaturated fatty acids have one or more double bonds.
  • Phospholipids have two fatty acids and a phosphate group attached to glycerol. These are hydrophobic "tails" and a hydrophilic "head"
    • Phospholipids form a bilayer in cell membranes.
  • Steroids have a carbon skeleton with four fused rings.
    • Cholesterol is an important steroid.

Proteins

  • Proteins account for more than 50% of the dry mass of most cells.
  • Proteins are polymers of amino acids.
  • Amino acids have an amino group (NH2) and a carboxyl group (COOH).
  • R-groups give unique properties to amino acids.
  • Polypeptides are chains of amino acids joined by peptide bonds.
  • Protein structure determines function.
    • Primary Structure: linear sequence of amino acids.
    • Secondary Structure: folding (α-helix and β-sheet) due to hydrogen bonds.
    • Tertiary Structure: overall three-dimensional shape stabilized by various interactions between R groups (hydrophobic interactions, hydrogen bonds, disulfide bridges, and ionic bonds).
    • Quaternary Structure: multiple polypeptide chains aggregated to form the functional protein (like collagen and hemoglobin).
  • Proteins perform a variety of functions (enzymatic, defensive, storage, transport, etc.).
  • Denaturation occurs when a protein loses its proper shape due to environmental factors(heat, pH, and chemicals).
    • Chaperonins assist in protein folding.

Nucleic Acids

  • Nucleic acids store, transmit, and help express hereditary information.
  • Genes are the units of inheritance and program protein synthesis.
  • Nucleic acids are polymers called polynucleotides, made up of nucleotide monomers.
  • Nucleotides have a nitrogenous base, a pentose sugar (deoxyribose or ribose), and one to three phosphate groups.
  • Nucleic acids are held together by phosphodiester bonds.
  • DNA (deoxyribonucleic acid) is double-stranded, with nitrogenous bases pairing (A-T, G-C).
  • RNA (ribonucleic acid) is single-stranded and plays a key role in protein synthesis (contains uracil instead of thymine).

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