Biochemistry Chapter: Protein Digestion and Glycolysis

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Questions and Answers

What is the primary site of protein digestion in the human body?

  • Mouth
  • Pancreas
  • Large intestine
  • Stomach (correct)

Which test results in a yellow-orange color indicating the presence of aromatic amino acids?

  • Ninhydrin test
  • Sakaguchi test
  • Xanthoprotein test (correct)
  • Biuret test

Which nitrogenous base pairs with adenine in DNA?

  • Uracil
  • Thymine (correct)
  • Guanine
  • Cytosine

Which of the following proteins can be detected using the Lead acetate test?

<p>Methionine (D)</p> Signup and view all the answers

What color result indicates a positive reaction for tryptophan in the Hopkins-Cole test?

<p>Purple (C)</p> Signup and view all the answers

What is the primary difference between glycolysis and gluconeogenesis?

<p>Gluconeogenesis is the formation of new glucose from non-carbohydrate sources. (C)</p> Signup and view all the answers

Which of the following enzymes directly produces ATP during glycolysis?

<p>Phosphoglycerate kinase (C)</p> Signup and view all the answers

Which shuttle system is responsible for transporting NADH and yielding 3 ATP?

<p>Malate-Aspartate shuttle (D)</p> Signup and view all the answers

How many irreversible steps are there in glycolysis, considering the presence of kinases?

<p>3 irreversible steps (B)</p> Signup and view all the answers

What is the result of pyruvate undergoing anaerobic glycolysis?

<p>It is converted to Lactate. (A)</p> Signup and view all the answers

Which enzyme catalyzes the conversion of oxaloacetate to phosphoenolpyruvate (PEP) in gluconeogenesis?

<p>PEP carboxykinase (D)</p> Signup and view all the answers

Which of the following is NOT a location where gluconeogenesis occurs?

<p>Muscle tissue (C)</p> Signup and view all the answers

What is the role of enolase in glycolysis?

<p>It removes water during dehydration. (B)</p> Signup and view all the answers

What is the primary function of the rough endoplasmic reticulum?

<p>Protein synthesis (A)</p> Signup and view all the answers

What is the term used for proteins that are soluble in dilute acid or alkali?

<p>Albuminoids (D)</p> Signup and view all the answers

Which of the following proteins is characterized as being insoluble in water or dilute salt solutions?

<p>Glutenin (D)</p> Signup and view all the answers

Which organelle is known as the 'suicide sac' due to its hydrolytic enzymes?

<p>Lysosomes (A)</p> Signup and view all the answers

Which statement correctly describes peroxisomes?

<p>They detoxify reactive oxygen species. (C)</p> Signup and view all the answers

Which type of protein can be coagulated by heat?

<p>Denatured proteins (D)</p> Signup and view all the answers

What process occurs to prevent the toxicity associated with NH3 in the brain?

<p>Urea cycle (B)</p> Signup and view all the answers

In the fluid mosaic model of the cell membrane, what property do phospholipids exhibit?

<p>Hydrophobic non-polar tails (A)</p> Signup and view all the answers

What is the role of the Golgi apparatus in the cell?

<p>Modifies proteins and lipids (A)</p> Signup and view all the answers

Which protein is NOT classified as a primary derived protein?

<p>Albuminates (B)</p> Signup and view all the answers

Which of the following proteins is insoluble in neutral solutions?

<p>Glutenin (B)</p> Signup and view all the answers

Which type of ribosome is found in bacteria?

<p>70S (D)</p> Signup and view all the answers

Which of these denatured proteins can only be dissolved by boiling in strong acids?

<p>Keratin (B)</p> Signup and view all the answers

Amino acids serve as building blocks for which biological macromolecule?

<p>Proteins (C)</p> Signup and view all the answers

Which of the following statements is true regarding the solubility of prolamines?

<p>Soluble in 80% alcohol (D)</p> Signup and view all the answers

What is the principal function of the smooth endoplasmic reticulum?

<p>Lipid synthesis (D)</p> Signup and view all the answers

What is the primary function of Vitamin B1?

<p>Coenzyme in pyruvate and α-ketoglutarate dehydrogenation (D)</p> Signup and view all the answers

Which vitamin deficiency is associated with Wernicke-Korsakoff syndrome?

<p>Vitamin B1 (B)</p> Signup and view all the answers

What condition is caused by a deficiency in Vitamin B3?

<p>Pellagra (D)</p> Signup and view all the answers

Which vitamin is crucial for the metabolism of folic acid?

<p>Vitamin B12 (C)</p> Signup and view all the answers

What is the main function of Vitamin B5?

<p>Serves as a functional part of CoA (A)</p> Signup and view all the answers

Which deficiency leads to a condition characterized by peripheral neuritis?

<p>Vitamin B6 (D)</p> Signup and view all the answers

What is the primary deficiency condition associated with Vitamin B9?

<p>Megaloblastic anemia (A)</p> Signup and view all the answers

Which vitamin acts as a coenzyme in fatty acid and carbohydrate metabolism?

<p>Vitamin H (B)</p> Signup and view all the answers

What condition is primarily caused by a deficiency in Vitamin B2?

<p>Cheilosis and seborrheic dermatitis (A)</p> Signup and view all the answers

Which of the following vitamins is NOT a water-soluble vitamin?

<p>Vitamin A (A)</p> Signup and view all the answers

What is the primary function of vitamin A?

<p>Visual pigment production (C)</p> Signup and view all the answers

Which vitamin is associated with wound healing due to its role in collagen synthesis?

<p>Vitamin C (B)</p> Signup and view all the answers

What condition is associated with a deficiency in vitamin A?

<p>Nyctalopia (D)</p> Signup and view all the answers

Which process is indicated as a natural error leading to genetic variation?

<p>Spontaneous mutation (D)</p> Signup and view all the answers

What is a key role of HGPRT in metabolism?

<p>Participating in purine metabolism (B)</p> Signup and view all the answers

Which vitamin is noted for enhancing iron absorption in the body?

<p>Vitamin C (B)</p> Signup and view all the answers

Which vitamin deficiency is characterized by symptoms associated with impaired collagen synthesis?

<p>Vitamin C (A)</p> Signup and view all the answers

What is a primary characteristic of fat-soluble vitamins?

<p>Stored in body fat and liver (A)</p> Signup and view all the answers

Flashcards

Ribosomes

The actual site of protein synthesis in cells.

Endoplasmic Reticulum (ER)

An organelle that synthesizes proteins (rough ER) and lipids (smooth ER).

Rough ER

Part of the ER that synthesizes proteins.

Smooth ER

Part of the ER that synthesizes lipids.

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Lysosomes

Organelles that contain enzymes to digest foreign substances.

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Peroxisomes

Organelles that detoxify harmful substances, break down long fatty acids.

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Golgi apparatus

Organelle that modifies and packages proteins and lipids.

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Cell Membrane

A phospholipid bilayer that forms the boundary of a cell.

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Pyruvate

A key intermediate in cellular respiration and metabolism, crucial for energy production and gluconeogenesis.

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Glycolysis

A metabolic pathway that converts glucose into pyruvate, producing a small amount of ATP, essential for energy.

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Gluconeogenesis

The biosynthesis of glucose from non-carbohydrate precursors, crucial for maintaining blood glucose levels, especially during fasting.

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Anaerobic Glycolysis

Glycolysis that occurs without oxygen, producing a small amount of ATP and lactate, vital for short-term energy needs in the absence of oxygen.

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G3P Shuttle

A process that shuttles G3P into the electron transport chain (ETC), resulting in ATP production.

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Malate-Aspartate Shuttle

Transportation of reducing equivalents (electrons) from glycolysis into the Krebs / Citric Acid Cycle for ATP production.

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ATP

Adenosine triphosphate, the primary energy currency of cells used for various cellular processes.

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Kreb's Cycle

A metabolic pathway in which acetyl CoA is oxidized to produce ATP, NADH, and FADH2.

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Electron Transport Chain (ETC)

A series of protein complexes in the inner mitochondrial membrane, essential for the final stages of energy production to form ATP through oxidative phosphorylation.

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HGPRT function

HGPRT catalyzes the conversion of hypoxanthine and guanine to nucleotides.

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Denaturation

The process where a protein loses its native shape and function due to the disruption of its secondary and tertiary structures.

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Gluconeogenesis

The metabolic pathway that produces glucose from non-carbohydrate sources

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Primary Derived Proteins

Proteins that have been altered by denaturing agents, losing their original structure.

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Reverse Transcription

RNA is used as a template to create DNA

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Glutelins

A group of storage proteins, insoluble in water but soluble in dilute acids or alkalis.

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Prolamines

Storage proteins insoluble in water, but soluble in 80% alcohol.

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Vitamins (essential nutrients)

Nutrients needed for life sustaining processes in human body.

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Vitamin A deficiency

Leads to night blindness (nyctalopia).

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Albuminoids

Insoluble proteins, dissolved by boiling in strong acids.

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Drying (Pharmacognosy)

Removing water to prevent microbial growth and damage.

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Secondary Derived Proteins

Proteins that have been altered chemically (e.g., by hydrolysis, acid/alkali treatment), creating altered forms compared to primary derived proteins.

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Proteans

A type of protein formed via hydrolysis or reaction with acids or alkalis.

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Metaproteins

Proteins modified by chemicals like acid or alkali, changing their properties.

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Urea Cycle

A series of biochemical reactions that convert ammonia to urea, detoxifying the body.

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Protein Digestion Start

Protein digestion begins in the stomach.

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Protein Digestion End

Protein digestion ends in the small intestine.

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Protein Digestion Enzyme

Peptidases (proteases) are the enzymes that digest proteins.

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Ninhydrin test

A qualitative test for the presence of amino acid (amino group)

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Biuret test

A qualitative test for peptide bonds in proteins

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Xanthoprotein test

A qualitative test for aromatic amino acids (e.g., tyrosine, phenylalanine, tryptophan).

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Millon-Nasse test

Qualitative Test for the detection of Phenol (tyrosine)

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Hopkins-Cole test

Test for indole group (trytophan)

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Nucleic Acid Building Blocks

Nucleotides are the building blocks of nucleic acids.

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Nucleic Acid Components

Nucleotides consist of a nitrogenous base, a sugar (ribose or deoxyribose), and a phosphate group.

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DNA Base Pairs

Adenine pairs with Thymine, and Guanine pairs with Cytosine in DNA.

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Water-soluble vitamins

Vitamins that dissolve in water and are not stored in the body, requiring frequent intake.

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B1 (Thiamine)

A water-soluble vitamin that acts as a coenzyme in pyruvate and α-ketoglutarate reactions, crucial for energy production.

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B1 Deficiency (Beri-beri)

A condition caused by insufficient intake of B1, leading to neurological symptoms like Wernicke-Korsakoff syndrome.

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B2 (Riboflavin)

A water-soluble vitamin crucial for various redox reactions within cells, acting as a coenzyme for them.

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B3 (Niacin)

A water-soluble vitamin acting as a coenzyme NAD and NADP, enabling critical redox reactions in the body.

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B5 (Pantothenic Acid)

A water-soluble vitamin that plays a role in various metabolic activities, forming part of the Coenzyme A.

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B6 (Pyridoxine)

A water-soluble vitamin that acts as a coenzyme in transamination reactions, impacting protein metabolism.

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B9 (Folic Acid)

A water-soluble vitamin involved in transferring 1 carbon fragments in the body, impacting DNA and red blood cell production.

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B12 (Cobalamin)

A water-soluble vitamin crucial for transferring 1 carbon fragments, necessary for nerve function and red blood cell production.

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Frameshift mutation

A genetic mutation that alters the reading frame of mRNA, leading to a significant change in the protein sequence.

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Xeroderma Pigmentosum

A genetic disorder causing extreme sensitivity to sunlight due to a deficiency in DNA repair mechanisms.

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Study Notes

Biochemistry & Pharmacognosty

  • Biochemistry is the science dealing with the chemical basis of life.
  • Biomolecules are studied, including carbohydrates, lipids, proteins, and nucleic acids.
  • The cell is the basic unit of life, with a membrane having integral and peripheral proteins.
  • The cell membrane is semi-permeable, allowing some substances to pass through.
  • Carbohydrates are polyhydroxyaldehydes or polyhydroxyketones with monosaccharides as building blocks.
  • Reactions include dehydration for synthesis and hydrolysis for degradation.
  • Carbohydrates are classified based on the number of monomer units (monosaccharides, disaccharides, oligosaccharides, polysaccharides).
  • Isomerism exists in carbohydrates (enantiomers, anomers, epimers, tautomers).
  • Isomers have the same chemical formula but different structures.
  • Pyranose- and furanose-forms of monosaccharide ring structures exist.
  • Cells have organelles including ribosomes, endoplasmic reticulum, lysosomes, golgi apparatus and mitochondria.
  • Metabolism encompasses catabolic (breaking down) and anabolic (building up) reactions.
  • Amphibolism connects catabolic and anabolic pathways.
  • The Krebs cycle helps produce energy for cells where acetyl CoA enters the cycle to produce energy units.
  • Electron Transport Chain uses electron carriers and produces ATP for cellular energy.
  • Glycolysis & Gluconeogenesis are pathways involving biochemical reactions that concern glucose.
  • Glycogenolysis & Glycogenesis are pathways that involve the breakdown and synthesis of glycogen, respectively.
  • Lipids are hydrophobic molecules categorized into simple, complex, and derived lipids.
  • Waxes, fats/oils, and sterols are simple lipids while phospholipids, glycolipids, and lipoproteins are complex lipids.
  • The components of lipids are fatty acids, monoglycerides, diglycerides, and triglycerides.
  • Proteins are amino acid polymers with primary, secondary, tertiary, and quaternary structures.
  • There are various classifications and functions of proteins (structural, enzymes, etc.)
  • Nucleic acids (DNA and RNA) store genetic information in a double-helix structure.
  • DNA replication leads to duplication via the semi-conservative method where each helix has a template and new strand.
  • Protein synthesis and decoding of genetic information using mRNA, tRNA, and rRNA.
  • Various types of mutations can occur, changing the genetic code and associated proteins.
  • Various vitamins and associated biochemical functions are important to human metabolism.

Pharmacognosty

  • Drugs are sourced from natural products (plants & animals).

  • Studying plants and animals for drug sources is pharmacognosty.

  • Crude drugs are collected plants and animals that undergo drying and processing to extract components.

  • These include methods of collection, drying, and garbling.

  • Extractives refer to the extracted active ingredients, while menstruum refers to the solvent.

  • Qualitative tests (Carbohydrates and Proteins) exist to identify components in natural products.

  • Physical constants (density, melting point) help in identification and classification of natural products.

  • Classifications (taxonomic, morphological, and phylogenetic) can be used to classify natural products.

  • Various volatile oils, glycosides, and other compounds are extracted via different techniques for many applications, from processing into extracts and or by other means.

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