Autophagy and Aging - Week 7 Overview
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Questions and Answers

What is a consequence of inadequate turnover of organelles in aging cells?

  • Higher levels of free radicals (correct)
  • Increased energy production
  • Reduced protein damage
  • Increased macroautophagy activity

How does maintained insulin signaling affect macroautophagy in aging cells?

  • It enhances glucagon activity.
  • It decreases mTOR activation.
  • It promotes autophagosome formation.
  • It inhibits macroautophagy. (correct)

Which diet has been shown to regenerate various cell types and extend longevity in mice?

  • High protein diet
  • Low-fat diet
  • Caloric excess diet
  • Fasting Mimicking Diet (FMD) (correct)

What is a key function of V-ATPase in autophagic processes?

<p>To pump H+ into the lysosomal lumen (D)</p> Signup and view all the answers

Why might glucagon's stimulatory effect on macroautophagy be compromised in old cells?

<p>Due to maintained negative signaling through the insulin receptor (B)</p> Signup and view all the answers

What effect does a decline in macroautophagy have on aging cells?

<p>Reduces cellular turnover (A)</p> Signup and view all the answers

What health benefits were observed in mice fed a Fasting Mimicking Diet?

<p>Improved learning and memory (C)</p> Signup and view all the answers

What major mechanism is activated by the insulin receptor that affects macroautophagy?

<p>Activation of the mTOR pathway (A)</p> Signup and view all the answers

What role does mTORC1 play in the regulation of protein synthesis?

<p>Inhibitor of eIF4E assembly (B), Promoter of ribosomal RNA transcription (C)</p> Signup and view all the answers

Which of the following components is not part of the mTORC1 complex?

<p>S6K1 (D)</p> Signup and view all the answers

How does mTORC1 affect 4EBP in regards to mRNA translation?

<p>dissociates from eIF4E to enable translation (D)</p> Signup and view all the answers

Which of the following is a regulator of mTORC1 activity?

<p>Rapamycin (A)</p> Signup and view all the answers

What is the result of mTORC1 signaling to S6K?

<p>Liberation of eIF4E (B)</p> Signup and view all the answers

What class of mRNA does mTORC1 signaling particularly affect based on recent analyses?

<p>Translated mRNAs (A)</p> Signup and view all the answers

Which amino acid is mentioned as a key regulator of mTORC1 activation?

<p>Leucine (B)</p> Signup and view all the answers

What is the function of Ragulator in relation to mTORC1?

<p>Releases GTP from RagC (B)</p> Signup and view all the answers

What is the primary role of the low pH in lysosomes?

<p>It promotes the activity of acid hydrolases. (D)</p> Signup and view all the answers

Which of the following transporters is known for sensing luminal arginine?

<p>SLC38A9 (C)</p> Signup and view all the answers

What is the primary role of mTORC1 in cellular processes?

<p>It coordinates stimuli that promote ribosome production. (A)</p> Signup and view all the answers

What is one function of mTORC1 in cells?

<p>Promotes protein synthesis through phosphorylation of effectors. (A)</p> Signup and view all the answers

Which of the following enzymes is responsible for converting fatty acyl-carnitine back to fatty acyl-CoA?

<p>CPT2 (C)</p> Signup and view all the answers

How does cholesterol exit the lysosome?

<p>Through NPC1/NPC2 proteins and SCARB2. (C)</p> Signup and view all the answers

In beta-oxidation, how many carbons are processed at a time from fatty acids?

<p>Two carbons at a time (D)</p> Signup and view all the answers

What potential problem does solute efflux in lysosomes help prevent?

<p>Increased lysosomal hydrostatic pressure. (A)</p> Signup and view all the answers

In which location do proton-coupled amino acid transporters primarily function?

<p>On the lysosomal membrane and in the small intestine. (B)</p> Signup and view all the answers

What must occur before fatty acids can undergo oxidation in the mitochondria?

<p>They must be activated and transported to the mitochondrion. (D)</p> Signup and view all the answers

Which effector does mTORC1 directly phosphorylate to promote mRNA translation initiation?

<p>p70S6 Kinase 1 (D)</p> Signup and view all the answers

Which of the following components is liberated as a result of mTORC1 signaling?

<p>eIF4E (C)</p> Signup and view all the answers

What is the effect of S6K1 phosphorylation in the context of protein synthesis?

<p>It activates substrates that promote mRNA translation initiation. (D)</p> Signup and view all the answers

What is the primary product of each round of fatty acid oxidation?

<p>One Acetyl-CoA (B)</p> Signup and view all the answers

What role does the thiolase enzyme play in fatty acid metabolism?

<p>It catalyzes the reverse reaction when the R-group is a hydrogen. (C)</p> Signup and view all the answers

Which reaction in beta oxidation is similar to the fumarase reaction of the citric acid cycle?

<p>Reaction 2 (B)</p> Signup and view all the answers

What are the end products after each cycle of fatty acid oxidation?

<p>One FADH2, one NADH, one Acetyl-CoA, and one fatty acid shortened by two carbons. (C)</p> Signup and view all the answers

What form of fatty acyl-CoA ligase begins the activation of fatty acids?

<p>Long-chain fatty acyl-CoA ligase (D)</p> Signup and view all the answers

Flashcards

Macroautophagy failure in aging

Impaired macroautophagy, a cellular recycling process, contributes to aging by reducing the removal of damaged organelles and cellular components.

Autophagic vacuole accumulation

Lysosomes failing to fuse with autophagic vacuoles leading to a buildup of undegraded material in aging cells.

Reduced autophagosome formation

Aging cells may not make enough autophagosomes due to decreased activation of macroautophagy by inhibitors such as mTOR.

Organelle turnover

The process of replacing or removing damaged organelles (such as mitochondria) within a cell.

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Fasting Mimicking Diet (FMD)

A short-term dietary intervention mimicking the benefits of fasting.

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Stem cell regeneration

FMD can increase the number of stem cells, leading to regrowth of multiple cell types.

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Low lysosomal pH

A critical acidic environment inside lysosomes maintained by V-ATPase for the breakdown of waste materials.

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V-ATPase

A protein complex that helps maintain low lysosomal pH using energy from ATP.

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Lysosome pH

Low pH (acidic) inside lysosomes

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Acid hydrolases

Important enzymes in lysosomes that break down macromolecules (protein, lipid, etc).

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SLC transporters

Transporters that move molecules (specifically solutes like amino acids) out of lysosomes into cytoplasm.

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SLC38A9

Amino acid transporter that senses arginine and activates mTOR on lysosome.

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Lysosomal efflux

Removal of substances (eg. cholesterol, amino acids) from lysosomes.

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mTORC1

Central regulator of cell growth/division and anabolism/catabolism balance.

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Proton-Coupled Amino acid transporters

Transporters located in small intestine & lysosomes.,They function by exchanging H+ protons with amino acids.

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mTOR activation

Arginine and other amino acid trigger activation of mTOR on lysosomal surface by amino acid sensing machinery.

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mTORC1's Role in Ribosome Biogenesis

mTORC1 stimulates the creation of ribosomes by promoting the production of ribosomal RNA, ribosomal proteins, and other essential components.

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mTORC1's Regulation of Translation

mTORC1 controls the translation of mRNA into proteins on ribosomes by activating key proteins like S6K and 4E-BP1/2.

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Fatty Acid Transport into Cells

Fatty acids enter cells via CD36 or FATP4 transporters.

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Fatty Acyl-CoA Formation

Inside the cell, fatty acids are converted to fatty acyl-CoA, a molecule required for further metabolism.

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Carnitine Shuttle

The carnitine shuttle transports activated fatty acids (as fatty acyl-carnitine) into the mitochondria for beta-oxidation.

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Raptor

A key component of mTORC1, essential for its proper function.

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What does mTORC1 regulate?

mTORC1 regulates protein synthesis, ribosome biogenesis, and mRNA translation through its downstream targets like 4EBP and S6K.

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4EBP

A protein that inhibits translation by binding to eIF4E, preventing the formation of the eIF4F complex.

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eIF4F complex

A complex of proteins that initiates protein synthesis by binding to mRNA.

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How does mTORC1 activate translation?

mTORC1 phosphorylates 4EBP, causing it to detach from eIF4E. This allows the eIF4F complex to form and start translation.

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mTORC1 and Ribosome Biogenesis

mTORC1 positively regulates several steps in ribosome biogenesis, including ribosomal RNA transcription and the synthesis of ribosomal proteins.

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How does mTORC1 control translation?

mTORC1 regulates mRNA translation on ribosomes by signaling to S6K and 4EBP1/2, which ultimately increases ribosome biogenesis and translation of target mRNAs.

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Fatty Acid Activation

The process of converting a free fatty acid into a fatty acyl-CoA, which is necessary for entry into beta-oxidation.

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Long Chain Fatty Acyl-CoA Ligase

An enzyme that catalyzes the activation of long-chain fatty acids by attaching CoA to them, forming fatty acyl-CoA.

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Beta Oxidation - Reaction 1

The first step in beta-oxidation, where the fatty acyl-CoA is oxidized by FAD, producing FADH2 and a trans double bond between the alpha and beta carbons.

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Beta Oxidation - Reaction 2

The second step in beta-oxidation, where water adds across the double bond, forming an alcohol group.

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Beta Oxidation - Reaction 3

The third step in beta-oxidation, where the alcohol group is oxidized by NAD+, producing NADH and a ketone.

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Study Notes

Week 7, Lecture 11

  • Autophagy Failure in Aging: Possible causes and consequences of autophagy failure in old organisms are depicted in a schematic model.
  • Autophagic Vacuoles and Lipofuscin: Accumulation of autophagic vacuoles may occur due to the inability of lipofuscin-loaded lysosomes to fuse and degrade sequestered content.
  • Macroautophagy Enhancers and Glucagon: The formation of autophagosomes in old cells might be reduced because of the inability of macroautophagy enhancers (like glucagon) to fully activate the pathway. This effect is compromised in aged cells because of maintained negative signalling via the insulin receptor even under baseline conditions.
  • Maintaining Insulin Signaling: Maintaining insulin signaling activates mTOR, a key repressor of macroautophagy.
  • Inadequate Organelle Turnover: Inadequate turnover of organelles (like mitochondria) in aging cells can increase free radical levels, leading to protein damage.
  • Insulin Receptor and Free Radicals: Free radicals can further potentiate inhibitory signalling through the insulin receptor.
  • Age-Dependent Decline in Macroautophagy: An age-related decrease in macroautophagy can compromise the energetic balance of aging cells.
  • Autophagy and Longevity: Autophagy plays a critical role in maintaining longevity through multiple processes.
  • Pro-longevity Mechanisms: Factors like neural protection, cancer blockage, anti-inflammatory signaling, genomic integrity, stem cell rejuvenation, and cellular/tissue homeostasis all contribute to pro-longevity mechanisms.
  • Periodic Fasting and Regeneration: Periodic fasting mimicking diets (FMD) in mice promote multi-system regeneration, improving markers for rejuvenation, adiposity, inflammatory diseases, and cognitive function.
  • Lipid and Nucleic Acid Synthesis: mTORC1 plays a crucial role in controlling protein, lipid, and nucleic acid synthesis.
  • Anabolism and Catabolism: mTORC1 regulates the balance between anabolism and catabolism in response to environmental conditions.
  • mTORC1 Substrate: The mTORC1 substrate 4EBP (eukaryotic initiation factor 4E binding protein) is unrelated to S6K1 and interferes with translation.
  • Ribosome Production and Regulation: mTORC1 positively regulates ribosomal RNA transcription and protein synthesis as a way to control stimulus like stressors that lead to increased ribosome production.
  • mTORC1 Regulation of mRNA Translation: mTORC1 has a key role in regulating mRNA translation by its effect on S6K and 4EBP which affects the biogenesis of ribosomes.
  • Amino Acid Sensing and Lysosome: Arginine activation of SLC38A9 triggers the recruitment of mTORC1 to the lysosome surface and activates it in this process.
  • Fatty Acid-Carnitine Shuttle: The process of transporting fatty acids into the mitochondria for oxidation (β-oxidation).
  • Fatty Acid Pathway Stages: Different stages exist: 1. Oxidation, 2. Hydration, 3. Oxidation, and 4. Cleavage.
  • Enzyme Roles in Fatty Acid Oxidation: Enzymes like acyl-CoA dehydrogenase, enoyl-CoA hydratase, and hydroxyacyl-CoA dehydrogenase are vital in fatty acid oxidation, leading to acetyl-CoA, FADH2, NADH generation.
  • Fatty Acid Oxidation Reactions: The four beta-oxidation reactions, where each round shortens the fatty acid chain reducing it to acetyl-CoA, also produce FADH2 and NADH.

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Week 7 Lecture 11 PDF

Description

Explore the effects of autophagy failure in aging organisms, including causes, consequences, and the role of insulin signaling. This quiz addresses key concepts such as the accumulation of autophagic vacuoles and the impact of macroautophagy enhancers like glucagon. Understand the relationship between inadequate organelle turnover and oxidative stress in aged cells.

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