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Questions and Answers
What is the role of ATP-ADP translocase in mitochondria?
What is the role of ATP-ADP translocase in mitochondria?
How many ATP molecules are produced for every acetyl CoA that enters the citric acid cycle?
How many ATP molecules are produced for every acetyl CoA that enters the citric acid cycle?
What does the P/O ratio represent in the context of oxidative phosphorylation?
What does the P/O ratio represent in the context of oxidative phosphorylation?
Which enzyme is primarily responsible for the phosphorylation of glucose to keep intracellular concentrations low?
Which enzyme is primarily responsible for the phosphorylation of glucose to keep intracellular concentrations low?
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What is the fate of pyruvate in cellular metabolism?
What is the fate of pyruvate in cellular metabolism?
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Which component of the electron transport chain directly receives electrons from CoQH2?
Which component of the electron transport chain directly receives electrons from CoQH2?
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What is the main role of cytochrome c within the electron transport chain?
What is the main role of cytochrome c within the electron transport chain?
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Which of the following inhibitors affects Complex I of the electron transport chain?
Which of the following inhibitors affects Complex I of the electron transport chain?
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What is produced from the reaction involving O2 and protons during oxidative phosphorylation?
What is produced from the reaction involving O2 and protons during oxidative phosphorylation?
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In which part of the mitochondria does ATP synthesis occur through ATP synthase?
In which part of the mitochondria does ATP synthesis occur through ATP synthase?
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What is the function of the F0 sector in ATP synthase?
What is the function of the F0 sector in ATP synthase?
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How many protons are pumped across the inner membrane when electrons are transferred from NADH?
How many protons are pumped across the inner membrane when electrons are transferred from NADH?
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Which subunits comprise the catalytic part of the ATP synthase complex?
Which subunits comprise the catalytic part of the ATP synthase complex?
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What is the final product of the oxidative decarboxylation of α-ketoglutarate?
What is the final product of the oxidative decarboxylation of α-ketoglutarate?
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Which statement accurately describes the enzyme succinate dehydrogenase?
Which statement accurately describes the enzyme succinate dehydrogenase?
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What role does CoQH2 play in the electron transport chain?
What role does CoQH2 play in the electron transport chain?
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Which complex in the electron transport chain is responsible for pumping protons due to the energy released from electron transfer?
Which complex in the electron transport chain is responsible for pumping protons due to the energy released from electron transfer?
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Which metabolic pathway is characterized as an amphibolic pathway?
Which metabolic pathway is characterized as an amphibolic pathway?
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What is the main purpose of the electron transport chain in cellular respiration?
What is the main purpose of the electron transport chain in cellular respiration?
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Which complex of the electron transport chain has the least energy yield compared to the others?
Which complex of the electron transport chain has the least energy yield compared to the others?
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The phosphorylation of GDP during the citric acid cycle occurs in which step?
The phosphorylation of GDP during the citric acid cycle occurs in which step?
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Study Notes
Metabolism: Study of Cellular Biochemical Reactions
- Metabolism is the sum total of all chemical reactions within a cell.
- Catabolism breaks down larger molecules into smaller ones, releasing energy.
- Anabolism builds larger molecules from smaller ones, requiring energy.
- Amphibolic pathways are involved in both catabolism and anabolism.
- Metabolic pathways can be linear, cyclic, or branched.
Overview of Metabolism
- Anabolism and catabolism occur simultaneously within a cell.
- Cells manage these processes by regulating them and localizing them in different cellular compartments.
Metabolic Pathways
- Metabolic pathways exhibit various configurations including linear, cyclic, and branched.
Specific Location of Metabolic Reactions Inside the Cell
- Cellular compartments, such as the cytosol, nucleus, and mitochondria, have roles in metabolic reactions.
- Mitochondria are essential for energy production.
Key Intermediates of Metabolism
- Adenosine phosphates: AMP, ADP and ATP are crucial to energy transfer reactions
- Flavin Adenine Dinucleotide (FAD): Crucial for redox reactions, has different oxidized and reduced states (FAD/FADH₂)
- Nicotinamide Adenine Dinucleotide (NAD+): Necessary for redox reactions, exists in oxidized and reduced forms (NAD+/NADH)
- Coenzyme A (CoA): Essential for the transfer of acetyl groups, forms acetyl CoA.
Oxidation-Reduction Reactions of FAD & NAD+
- FAD is involved in the oxidation and reduction of molecules. FAD can accept and donate electrons from substrates.
- NAD+ participates in redox reactions, facilitating electron transfer during metabolic processes. NAD+ gains electrons (reduced to NADH) in certain reactions, and loses electrons (oxidized) in others. This redox behavior plays a critical part in metabolism.
Biochemical Energy Production
- Digestion breaks down large food molecules into smaller components.
- Small molecules are further degraded into simpler units like the acetyl group, a part of acetyl CoA.
- Acetyl CoA is oxidized in the citric acid cycle to produce CO₂ and reduced coenzymes (NADH and FADH₂).
- NADH and FADH₂ drive ATP production through the electron transport chain and oxidation phosphorylation.
Citric Acid Cycle
- The citric acid cycle oxidizes acetyl CoA to CO2 and produces NADH and FADH2.
- The cycle is a crucial part of cellular respiration, generating energy for other metabolic processes.
- The enzymes in the citric acid cycle are involved in catalyzing reactions.
- Regulation of the citric acid cycle is essential to ensure its efficient operation.
Reactions of the Citric Acid Cycle
- Step 1: Citrate formation is essential for the cycle's operation.
- Step 2: Isomerization of citrate
- Step 3: Oxidative decarboxylation of isocitrate
- Step 4: Oxidative decarboxylation of a-ketoglutarate
- Step 5: Cleavage of succinyl CoA
- Step 6: Succinate oxidation
- Step 7: Hydration of fumarate
- Step 8: Oxidation of L-malate
Summary of the Reactions of the Citric Acid Cycle
- The reaction summary provides a comprehensive overview showing all reactants and products.
Electron Transport Chain
- Electrons from NADH and FADH2 are transferred through a multi-protein chain embedded in inner mitochondrial membrane
- This transfer releases energy to pump protons (H⁺) across the inner mitochondrial membrane, forming a proton gradient.
- ATP is generated as protons flow back across the membrane through ATP synthase by oxidative phosphorylation.
Complexes of Electron Transport Chain
- Complex I (NADH-CoQ reductase): Initial electron transfer step.
- Complex II (Succinate-CoQ reductase): Electrons from FADH2 enter the ETC.
- Complex III (CoQ-Cytochrome c reductase): Middle transporter of the electron flow.
- Complex IV (CoQ-Cytochrome c oxidase): Final electron acceptor and the generation of water.
- ATP Synthase: The final part of the electron transport chain, using the proton gradient to produce ATP from ADP and Pi.
Inhibitors of Electron Transport Chain
- Rotenone inhibits complex I.
- Cyanide and carbon monoxide inhibit complex IV.
Oxidative Phosphorylation
- Oxidative phosphorylation is the process of ATP synthesis, depending on energy released from protons passing through ATP synthase.
ATP Synthase
- The components of ATP synthase are involved in ATP synthesis through oxidative phosphorylation.
- Protons flow through the Fo part and power the production of ATP in the F1 sector.
Transfer of ATP into Outside of Matrix
- ATP is transported from the matrix of the mitochondrion to the intermembrane space by ATP-ADP translocase to be used by other processes.
P/O Ratio
- The P/O ratio refers to the number of ATP molecules produced per two electrons transferred through the electron transport chain, following oxidative phosphorylation.
Metabolism of Carbohydrates
- Carbohydrate metabolism involves processes like glycolysis, glycogenolysis, and gluconeogenesis.
Digestion and Absorption of Carbohydrates
- Digestion processes, including those occurring in the mouth, stomach, and small intestine all work towards disaccharide hydrolysis to glucose.
- Monosaccharides (glucose, fructose, galactose) are absorbed and enter the bloodstream.
Glycolysis
- Glycolysis is the central catabolic pathway for carbohydrates.
- Glycolysis breaks down glucose into two molecules of pyruvate.
Fates of Pyruvate
- In the presence of oxygen(aerobic), pyruvate is converted into acetyl-CoA
- In the absence of oxygen (anaerobic), pyruvate is converted to either lactate or ethanol, depending on the organism.
Reactions of Glycolysis
- Key regulated steps of glycolysis.
- Key enzymes that are specific to glycolysis.
Entry of Other Monosaccharides to Glycolysis
- Mannose, galactose, and fructose can enter the glycolytic pathway.
Entry of Pyruvate into the Citric Acid Cycle
- Pyruvate is converted into acetyl-CoA, linking glycolysis to the citric acid cycle, by the enzyme pyruvate dehydrogenase.
Glycerol-3-Phosphate Shuttle
- Cytosol NADH can be used to produce mitochondrial FADH₂ through this route.
Malate-Aspartate Shuttle
- Cytosolic NADH can be used to produce mitochondrial NADH through this route, yielding 2.5 ATPs.
Net Yield of ATP per Glucose Molecules
- ATP yield calculation from different pathways: glycolysis, glycerol-3-phosphate shuttle, and malate-aspartate shuttle and citric acid cycle.
Gluconeogenesis
- Is the metabolic pathway by which glucose is synthesized from noncarbohydrate sources, including pyruvate, lactate, and glycerol.
- It's not simply the reverse of glycolysis; several different enzymes are required.
- It requires energy input beyond the ATP gained in glycolysis.
Cori Cycle
- Lactate produced by anaerobic respiration in muscles is transported to the liver.
- The liver converts lactate back to glucose via gluconeogenesis.
- The cycle is an example of how different tissues cooperate to maintain glucose homeostasis.
Other Metabolic Pathways of Carbohydrates
- Glucose can be used in multiple ways, branching to many different metabolic pathways.
Mobilization of Fats
- Mobilization of fats involves the breakdown of triacylglycerols, using enzymes and cAMP signaling.
Catabolism of Glycerol
- Glycerol is transported to the liver, converted to dihydroxyacetone phosphate (DHAP), an intermediate in glycolysis.
Catabolism of Fatty Acids
- Fatty acids are broken down in three stages.
- Activation: Binding to Coenzyme A using ATP.
- Transport: Transport into mitochondria.
- Oxidation: Repeated oxidation via β-oxidation pathway generating acetyl CoA, NADH, and FADH₂.
Activation of Fatty Acids
- Fatty acids are activated using coenzyme A and ATP hydrolysis.
Transport of Fatty Acids
- Fatty acids are transported across the mitochondrial membrane using carnitine as a shuttle mechanism.
Beta-oxidation of Fatty Acids
- Repeated cycles of oxidation producing acetyl CoA, NADH, and FADH₂.
ATP Yield of Catabolism of Fatty Acids
- Calculation of total ATP generated from complete fatty acid oxidation.
Ketone Bodies
- Excess acetyl CoA is converted into ketone bodies, acetoacetate, 𝛽-hydroxybutyrate, and acetone.
- This process occurs if carbohydrate levels are insufficient to entirely supply glucose for metabolic needs.
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Description
This quiz explores the essential role of ATP-ADP translocase in mitochondria. It examines its function in cellular energy transfer and the importance of this protein in maintaining energy balance within the cell.