Advances in Agricultural Pest Control

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Questions and Answers

Productivity in agriculture has been enhanced due to advances in ______ control.

pest

The rise in resistance to current control agents has prompted the search for new ______.

pesticides

Between 1984 to 1990, resistance to synthetic chemical pesticides increased by ______%.

13

A significant amount of research has focused on isolating insecticidal leads from marine ______.

<p>algae</p> Signup and view all the answers

This research has led to the isolation of over ______ active constituents.

<p>40</p> Signup and view all the answers

Synthetic chemical pesticides are also referred to as ______ (SCPs).

<p>synthetic chemical pesticides</p> Signup and view all the answers

The search for new pesticides has been necessary due to the significant rise in ______ to current control agents.

<p>resistance</p> Signup and view all the answers

Insects and mites have shown resistance to chemical pesticides, prompting an increase in ______ research.

<p>pest control</p> Signup and view all the answers

The AIDS pandemic in the 1980s forced organizations to explore natural products as sources of potential drug candidates for the treatment of ______.

<p>AIDS</p> Signup and view all the answers

Over 60,000 extracts of plants and marine organisms were tested against lymphoblastic cells infected with ______.

<p>HIV-1</p> Signup and view all the answers

The most important compounds found through these tests are known as ______.

<p>calanolides</p> Signup and view all the answers

Calanolide A and B were isolated from the ______ species.

<p>Calonphyllum</p> Signup and view all the answers

Prostratin was isolated from ______ nutans.

<p>Homalanthus</p> Signup and view all the answers

Arteether, introduced in 2000, is derived from ______.

<p>artemisinin</p> Signup and view all the answers

Artemisia annua was first used in traditional Chinese medicine as a remedy for ______ and fevers.

<p>chills</p> Signup and view all the answers

Bryologs, including ______, are derived from bryostatin 1.

<p>53</p> Signup and view all the answers

Other derivatives of artemisinin are in various stages of ______ development as antimalarial drugs in Europe.

<p>clinical</p> Signup and view all the answers

Bryostatin 1 (54) is an antineoplastic compound isolated from ______.

<p>Bulgula neritina</p> Signup and view all the answers

Bryostatin 1 (54) has been involved in more than ______ clinical trials.

<p>80</p> Signup and view all the answers

From 2007 to now, there have been four Phase ______ trials of bryostatin 1.

<p>I</p> Signup and view all the answers

Halichondrin B (55) has been isolated from several types of ______.

<p>sponges</p> Signup and view all the answers

Halichondrin E-7389 (56) is currently in Phase ______ trials for breast carcinoma.

<p>III</p> Signup and view all the answers

Halichondrin B (55) was successfully ______ along with its analogues.

<p>synthesized</p> Signup and view all the answers

Bryostatin 1 (54) has shown responses ranging from complete to ______ remission.

<p>partial</p> Signup and view all the answers

The process of isolating, purifying, and determining the structure of a suspected novel ______ can be time-consuming.

<p>compound</p> Signup and view all the answers

Classical techniques such as Ultraviolet absorption Spectroscopy (UV) and Infra-red spectroscopy (IR) assist in the determination of ______ compounds.

<p>pure</p> Signup and view all the answers

Single-crystal ______ analysis is utilized when the absolute configuration cannot be determined.

<p>X-ray</p> Signup and view all the answers

Hyphenated systems like HPLC-FTIR help in the ______ process of natural product extracts.

<p>dereplication</p> Signup and view all the answers

FIA-NMR involves the injection of a sample as a ______ into a fluid stream.

<p>plug</p> Signup and view all the answers

The mobile phase in FIA-NMR acts as a ______ to carry the sample to the NMR detector.

<p>hydraulic-push solvent</p> Signup and view all the answers

HPLC-NMR-MS is an advanced hyphenated ______ technique used in dereplication.

<p>spectrometric</p> Signup and view all the answers

The main advantage of HPLC-NMR-MS is the unequivocal matching of the MS data to the ______ spectrum.

<p>NMR</p> Signup and view all the answers

The application of HPLC-NMR to crude extracts was found to be a powerful ______ tool.

<p>spectroscopic</p> Signup and view all the answers

Extraction, isolation, purification, and structure elucidation are classical methodologies for studying novel bioactive ______ products.

<p>natural</p> Signup and view all the answers

Microcoil HPLC-NMR and capillary NMR have advanced due to the advent of higher field ______ and cryo-probes.

<p>magnets</p> Signup and view all the answers

The choice of extraction solvent can cause many problems including the formation of ______.

<p>artifacts</p> Signup and view all the answers

Capillary NMR allows the use of non-deuterated solvents in the off-line HPLC ______.

<p>separation</p> Signup and view all the answers

Homogenization and lyophilization with organic solvents can affect the nature and relative amounts of extracted ______ metabolites.

<p>secondary</p> Signup and view all the answers

The extraction is normally the first step for both marine and terrestrial ______.

<p>organisms</p> Signup and view all the answers

Isolated compounds are redissolved in deuterated solvents and subjected to ______-NMR spectroscopy.

<p>1H</p> Signup and view all the answers

The information acquired from both 1D and 2D NMR spectra may be sufficient to identify compound ______.

<p>classes</p> Signup and view all the answers

The use of HPLC-NMR in natural products identification is well ______ in the literature.

<p>documented</p> Signup and view all the answers

Metabolomics aims to characterize all gene and cell products including mRNA, proteins, glycan structures and ______.

<p>metabolites</p> Signup and view all the answers

A single analytical technique capable of profiling all low molecular weight ______ of a given organism does not exist.

<p>metabolites</p> Signup and view all the answers

Mass spectrometry hyphenated with gas chromatography, liquid chromatography, or capillary electrophoresis and nuclear magnetic resonance (NMR) are the leading analytical ______.

<p>platforms</p> Signup and view all the answers

Both primary and secondary metabolites in tissues and biofluids are extracted utilizing ______ crude extraction procedures.

<p>unbiased</p> Signup and view all the answers

Systems biology encompasses tools in the post-genomics revolution such as transcriptomics, proteomics, glycomics and ______.

<p>fluxomics</p> Signup and view all the answers

Combining analytical chemistry, biochemistry and sophisticated informatics allows for the analysis of thousands of small ______ in any biological system.

<p>molecules</p> Signup and view all the answers

Flashcards

Calanolides

A class of compounds that were identified as potential drug candidates for treating HIV-1 infection during the AIDS pandemic.

Calanolide A

A specific compound from the Calophyllum species with potential anti-HIV activity, which was tested in Phase II clinical trials.

Prostratin (26)

A compound from the Homalanthus nutans plant with potential anti-HIV activity, which entered Phase I clinical trials.

Artemisinin (28)

A natural product derived from Artemisia annua with potent antimalarial properties.

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Arteether (27)

A derivative of artemisinin used to treat malaria, derived from the plant Artemisia annua.

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Natural product drug discovery

A strategy for discovering new drugs that involves screening natural products for potential therapeutic properties.

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Clinical trials

The research and development process that involves testing and evaluating drug candidates in humans to assess their safety and effectiveness.

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Natural product chemistry

The study of the chemical compounds found in living organisms, including plants, animals, and microbes.

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Synthetic Chemical Pesticides (SCPs)

Synthetic chemical pesticides (SCPs) are chemicals used to control pests in agriculture.

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Pesticide Resistance

The ability of pests to develop resistance to pesticides over time, making them less effective.

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Need for New Pesticides

The rise in pesticide resistance has driven the search for new and more effective pesticides.

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Marine Algae as Pesticide Source

Marine algae are a rich source of potential insecticidal compounds.

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Insecticidal Compounds from Marine Algae

Over 40 active ingredients with insecticidal properties have been isolated from marine algae.

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Pesticide Resistance Increase (1984-1990)

The increase in pesticide resistance from 1984 to 1990 was a significant 13%.

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Natural Pesticide Discovery

The study of isolating and using active compounds from natural sources, like marine algae, to create new pesticides.

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Importance of Pesticide Research

The increase in pesticide resistance emphasizes the need for ongoing research and development of new pest control strategies.

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Bryologs

A class of synthetic derivatives derived from bryostatin 1, a natural antineoplastic compound.

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Bryostatin 1

An antineoplastic compound isolated from the bryozoan, Bulgula neritina, with potential therapeutic applications.

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Antineoplastic Compound

A compound that kills or inhibits the growth of cancer cells.

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Bryozoan

A type of marine invertebrate known for its diverse and often colorful colonies.

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Halichondrin B

A natural compound isolated from various sponges, with potential therapeutic applications, especially against breast cancer.

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Halichondrin E-7389

A structural analogue of Halichondrin B, currently in Phase III clinical trials for treating breast cancer.

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Phase III Clinical Trials

Clinical trials that evaluate the safety and effectiveness of a drug in a large group of patients.

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Phase I Clinical Trials

A stage of drug development focusing on assessing the safety and efficacy of a new drug in a small group of patients.

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Dereplication

The process of identifying known compounds in a mixture to avoid unnecessary research on already characterized molecules.

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Hyphenated Instrumentation

An analytical technique that combines two or more techniques, like HPLC and NMR, to analyze a sample.

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UV Spectroscopy

Spectroscopy technique using ultraviolet light to analyze compounds in solution.

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IR Spectroscopy

Spectroscopy technique using infrared light to identify functional groups in molecules.

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Mass Spectrometry (MS)

Spectroscopy technique that analyzes the mass-to-charge ratio of ions, providing information about the molecular weight and structure.

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Nuclear Magnetic Resonance (NMR) Spectroscopy

Spectroscopy technique that studies the magnetic properties of atomic nuclei, providing information about the structure and bonding of molecules.

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High Performance Liquid Chromatography (HPLC)

Technique that involves separating components of a mixture using a mobile phase and a stationary phase, providing information about the chemical composition of the mixture.

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HPLC-NMR-MS

Technique combining HPLC with NMR and MS for comprehensive analysis of complex mixtures. It provides both structural and compositional information.

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Silent Functional Groups

Functional groups that don't show up in NMR spectra due to deuterium exchange, like hydroxyl and amino groups.

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HPLC (High-Performance Liquid Chromatography)

The process of separating different compounds in a mixture using a column with a stationary phase and a mobile phase.

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NMR (Nuclear Magnetic Resonance)

A technique used to precisely identify the structure of molecules using magnetic fields.

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Microcoil HPLC-NMR

Using a smaller version of NMR coils to analyze smaller volumes of samples, increasing sensitivity and efficiency.

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Capillary NMR (CapNMR)

A technique for analyzing small samples of compounds using capillary tubes instead of normal NMR tubes.

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Off-line HPLC Separation

Using a non-deuterated solvent for the initial separation steps in HPLC, providing broader compatibility and lower costs.

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Metabolomics

A scientific field focusing on identifying and analyzing all the small molecules (metabolites) in a biological system, aiming to understand their roles and interactions.

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Analytical Platforms in Metabolomics

These are the main analytical tools used in metabolomics, combining separation techniques with detection methods.

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Unbiased Crude Extraction Procedures

These methods aim to extract all or most metabolites from biological samples in their natural forms, preserving their chemical integrity.

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Natural Products Identification/Characterization

It's a method for identifying and characterizing compounds, especially in complex mixtures like natural extracts.

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NMR for Compound Class Identification

This approach uses NMR spectroscopy to provide information about the structure and identity of compounds, helping to guide further analysis and isolation.

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Study Notes

Historical Overview of Natural Products in Drug Discovery

  • Natural products have historically been used for treating illnesses
  • Early records of natural product use are found in cuneiform tablets, Ebers Papyrus, and Chinese Materia Medica
  • Traditional use of natural products often involved trial and error, with palatability tests and/or observations on negative effects
  • Examples include Salvia for childbirth, Alhagi maurorum's sap (manna), and various fungal and plant extracts for specific ailments
  • Classical natural product chemistry has led to many drug candidates
  • Modern hyphenated spectroscopic techniques aid in natural product discovery
  • Metabolomic profiling and dereplication approaches provide comprehensive study of natural extracts

Primary and Secondary Metabolites

  • Primary metabolism involves building blocks like proteins, fats, nucleic acids, and carbohydrates, essential for all living things
  • Secondary metabolites are not essential for survival and have a unique profile for an organism; they are often a defense mechanism or adaptation to the environment
  • Secondary metabolites, also called natural products, are formed from primary metabolic intermediates like acetyl-CoA, shikimic acid, mevalonic acid, and 1-deoxyxylulose-5-phosphate
  • Natural products exhibit diverse biological activities

Historically Important Natural Products

  • Acetylsalicylic acid (aspirin) was derived from salicin.
  • Morphine, isolated from opium poppy.
  • Quinine (used for malaria).
  • Pilocarpine for glaucoma.
  • Penicillin from Penicillium notatum.
  • Vancomycin.
  • Erythromycin.
  • Important natural products for diseases (e.g., cancer, infections, autoimmune disorders).

Natural Products from Fungi

  • Piptoporus betulinus fungus used for antiseptic and corn pads.
  • Agaricus campestris (field mushroom) for throat ailments.
  • Lichens for dyes and cosmetics.
  • Penicillin (a significant antibiotic).

Natural Products from Plants

  • Plants have been used medicinally for thousands of years
  • Extracts of plants have been crucial for developing medicines (e.g., aspirin, morphine, taxol, etc.).

Natural Products from Marine Algae

  • Algae are a rich source of structurally diverse natural products (e.g., terpenoids).
  • Examples include polycavernoside-A (seafood poisoning), diterpenes (antitumor activity)
  • Polycavernoside-A (38) isolated from the red alga (seafood poisoning).
  • 4-acetoxydictylolactone (39), dictyolides A (40), B (41), and nordictyolide (42) display antitumor activities sourced from an alga.

Natural Products from Marine Sponges

  • Sponges contain unique chemical compounds, like sponge-derived C-nucleosides (e.g., spongouridine (51) and spongothymidine (52)) that are biologically active.

Natural Products from Other Marine Sources

  • Bryo-stains for biological activities.
  • Halichondrin B and E-7389 for use as anticancer drugs
  • Artemisia annua is the source of Artemisin and Arteether

Natural Product Chemistry versus Combinatorial Chemistry

  • Combinatorial chemistry creates many compounds efficiently; natural products are structurally complex and their synthesis is challenging
  • Current strategies combine methods from natural products, combinatorial chemistry, and new biotechnologies to optimize drug discovery.

Dereplication Strategies

  • Dereplication identifies known compounds to eliminate unnecessary testing.
  • Uses various methods (e.g., spectroscopic techniques, databases, bioassays) to expedite discovery of novel compounds and identify known ones.

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