Lyceum of Alabang Inc. Second Quarterly Coverage 2024 PDF
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Lyceum of Alabang Inc.
2024
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Summary
This document is a quarterly coverage for 2024, focusing on biology topics like cell division, cell cycle, and types of proteins. The document's format suggests that this document is for a school curriculum, specifically the Lyceum of Alabang. It may be helpful for students studying biology and related topics in a secondary school setting.
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LYCEUM OF ALABANG INC.INC. Cell Division LYCEUM OF ALABANG INC.INC. Cell Cycle cell grows in size organelles replicated Interphase = G1, S, G2 G1...
LYCEUM OF ALABANG INC.INC. Cell Division LYCEUM OF ALABANG INC.INC. Cell Cycle cell grows in size organelles replicated Interphase = G1, S, G2 G1 (non dividing) 10-12 hrs Mitotic S replication of DNA, synthesis of proteins 6-8 hrs associated with DNA Cell Division G2 synthesis of proteins 2-4 hrs associated with mitosis LYCEUM OF ALABANG INC.INC. What is Mitosis? Somatic Cell Division. LYCEUM OF ALABANG INC.INC. Meiosis One diploid (2n) --> Four haploid (1n) cells Reduces chromosome # from 46 --> 23 Reduces the DNA content from 2n --> 1n Mitosis One diploid (2n) cell --> two diploid daughter cells Maintains chromosome # 46 --> 46 Maintains DNA content 2n --> 2n LYCEUM OF ALABANG INC.INC. Gametes - a cell that participates in fertilization or formation of new organism Spermatocytes – sperm cell Oocytes – egg before maturation LYCEUM OF ALABANG INC.INC. Transport Mechanism LYCEUM OF ALABANG INC.INC. PASSIVE TRANSPORT - does not require the use of energy LYCEUM OF ALABANG INC.INC. WHAT IS DIFFUSION? DIFFUSION is the movement of solutes from an area of higher concentration to an area of lower concentration in solution. LYCEUM OF ALABANG INC.INC. OSMOSIS diffusion of water (solvent) across a selectively permeable membrane, such as a plasma membrane LYCEUM OF ALABANG INC.INC. ACTIVE TRANSPORT is a mediated transport process that requires energy provided by ATP. Movement of the transported substance to the opposite side of the membrane and its subsequent release from the carrier protein are fueled by the breakdown of ATP. LYCEUM OF ALABANG INC.INC. Biomolecules LYCEUM OF ALABANG INC.INC. Macromolecules are built (synthesized) within the cell itself in a process called dehydration synthesis (also called the condensation reaction), smaller molecules called subunits are joined by covalent bonds, like pearls on a string. The synthesis of macromolecules from smaller molecules requires energy. LYCEUM OF ALABANG INC.INC. Monosaccharides glucose LYCEUM OF ALABANG INC.INC. Polysaccharides Starch and cellulose are two important polysaccharides found in plants, and both are composed of long chains of glucose. LYCEUM OF ALABANG INC.INC. Polysaccharides Cellulose - a linear polymer of glucose subunits put together - not soluble - completely indigestible to all but a very few organisms LYCEUM OF ALABANG INC.INC. Polysaccharides Cellulase - enzyme that digest cellulose Pectin - occur in plant tissues, especially of fruits that bind water and sugar to make viscous solutions or gel. ex. algin, agar, and carrageen LYCEUM OF ALABANG INC.INC. Lipids they are relatively insoluble. The most important subclasses of lipids in your body are triglycerides, phospholipids, and steroids. LYCEUM OF ALABANG INC.INC. Fats Fats are a major type of lipid. They are broken down by hydrolysis reactions in cells to release energy for use by those cells. LYCEUM OF ALABANG INC.INC. Triglycerides called neutral fats or just fats, are synthesized from a molecule of glycerol and three fatty acids LYCEUM OF ALABANG INC.INC. Amino Acids Amino acids the building blocks of proteins!! They consist of a central carbon atom with a H, a –COOH, a NH2 and a “R” group attached. LYCEUM OF ALABANG INC.INC. Peptide bonds The bond that holds together amino acids into a large macromolecule called a polypeptide. LYCEUM OF ALABANG INC.INC. Types of LYCEUM OF ALABANG INC.INC. Globular Proteins - most common type of proteins - have folded ball like structure Examples: Alpha globulin Hemoglobin Carboxypeptidase Protein S pepsin LYCEUM OF ALABANG INC.INC. Fibrous Proteins protein with an elongated shape. Fibrous proteins provide structural support for cells and tissues. Long thread like structures Examples: Actin Collagen Elastin Keratin Myosin Pikachurin LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Functions of Proteins LYCEUM OF ALABANG INC.INC. Transport Proteins Protein is a major element in transportation of certain molecules. Hormonal Proteins Protein is involved in the creation of some hormones. LYCEUM OF ALABANG INC.INC. Contractile Proteins Proteins allow the body to move. Storage Proteins They are found in plant seeds, egg whites, and milk. LYCEUM OF ALABANG INC.INC. Nucleic Acid DNA and RNA LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Erwin Chargaff Chargaff’s rules The relative amounts of adenine and thymine are the same in DNA The relative amounts of cytosine and guanine are the same. LYCEUM OF ALABANG INC.INC. Hydrogen bonds P G C P P C G DNA IS MADE OF TWO P STRANDS OF P POLYNUCLEOTIDE C G P P A T P P T A P P T A P LYCEUM OF ALABANG INC.INC. DNA Practice C-DNA 1. ATG-GTA-ATA TAC-CAT-TAT 2. GTC-TGG-AAT CAG-ACC-TTA 3. GCC-GGC-TTA CGG-CCG-AAT LYCEUM OF ALABANG INC.INC. Nitrogenou RNA Phosphate s base (A, G, C, or U) group Ribonucleic acid ▪ different sugar ▪ T is replaced by U ▪ Single strand Sugar (ribose) LYCEUM OF ALABANG INC.INC. DNA Practice C-RNA 1. AAG-GCA-GGA UUC-CGU-CCU 2. GAA-CGG-AGA CUU-GCC-UCU 3. GCC-GAA-GAA CGG-CUU-CUU LYCEUM OF ALABANG INC.INC. Down Syndrome LYCEUM OF ALABANG INC.INC. Deletion LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. ATP – ADP CYCLE LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Photosynthesis LYCEUM OF ALABANG INC.INC. Photosynthesis Raw Materials Product sunlight 6 CO2 + 6 H2O C6H12O6 + 6 O2 Carbon Water Glucose Oxygen Dioxide (Sugar) LYCEUM OF ALABANG INC.INC. The Absorption Spectrum measurement of the absorption of light by chlorophyll as a function of wavelength occurs in the chloroplasts first step is the absorption of a photon of light by a molecule of chlorophyll. LYCEUM OF ALABANG INC.INC. The Absorption Spectrum LYCEUM OF ALABANG INC.INC. Stages of Photosynthesis Light Dependent Reaction (Light Reaction) Light Independent Reaction (Calvin Cycle) LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Light Dependent Reaction occurs in the thylakoids Photosystem – an organized array of proteins and pigments bound within the thylakoid membrane, consisting of a light antenna, a photocenter, and an associated electron transport system LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Reaction center – also photocenter, the part of a photosystem in which light-activated chlorophyll a transfers an electron transport system Photosystem I = P700 Photosystem II = P680 LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Plastoquinone – an electron carrier that transport electron to Cytochrome b6f complex. Photolysis (of water) – oxidation of water through the removal of hydrogen by highly oxidizing elements of photosystem 680, which in turn are regenerated with the energy of captured photons. LYCEUM OF ALABANG INC.INC. Steps in Light Dependent Reactions 1. Absorption of light as a photon by the chlorophyll molecule inside the chloroplast. 2. Within the chlorophyll molecule, the absorbed light energy excites electron to a higher state. 3. Photosystems will channel the excitation energy gathered by the chlorophyll molecules to the reaction center chlorophyll molecule which will then pass the electrons to a series of proteins located on the thylakoid membrane. LYCEUM OF ALABANG INC.INC. Steps in Light Dependent Reactions 4. Plastoquinone which is an electron carrier which will then transport the energized electron to Cytochrome b6f complex. 5. The electrons lost by Photosystem II are replaced by the process called photolysis, which involve the oxidation of water molecule, producing free electrons and oxygen gas (by-product of photosynthesis). 6. As electrons pass through the electron transport chain, the energy from the electron is used to pump up hydrogen ions from the stroma to the thylakoid, creating a concentration gradient. LYCEUM OF ALABANG INC.INC. Steps in Light Dependent Reactions 7. This gradient powers a protein called ATP synthase, which phosphorylates ADP to form ATP. 8. The low – energy electrons leaving P II are shuttled to Photosystem I. 9. Within the PI, low energy electrons are reenergized and are passed through an electron transport chain where they are used to reduce the electron carrier NADP+ to NADPH. LYCEUM OF ALABANG INC.INC. Steps in Light Dependent Reactions 10. When chloroplast receives a steady supply of photons, NADPH (Nicotinamide Adenosine Dinucleotide Phosphate) and ATP (Adenosine Triphosphate) are produced as the product which will then be use in the Light Dependent Reaction, and Oxygen as the by-product. LYCEUM OF ALABANG INC.INC. Light Dependent Reaction Raw materials: Water (H2O) and Light Product: NADPH, ATP, and Oxygen LYCEUM OF ALABANG INC.INC. Light Independent Reaction (Calvin Cycle) - occurs in the stroma Calvin cycle – the cycle in C3 photosynthesis in which NADPH2 and ATP reduce carbon dioxide to glyceraldehyde 3- phosphate (PGAL) LYCEUM OF ALABANG INC.INC. The raw material for carbon fixation are NADPH, ATP, CO2, and RuBP. The NADPH and ATP are used to fuel up Calvin cycle. LYCEUM OF ALABANG INC.INC. Three steps: 1. Carbon fixation 2. Reduction 3. Regeneration of RuBP LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. 1. Carbon fixation In this step carbon dioxide is attached to ribulose 1, 5- bisphosphate resulting in a six carbon molecule that splits into three carbon molecule. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. 2. Reduction A sequence of reactions using electrons from NADPH and some of the ATP to reduce carbon dioxide to Glyceraldehyde 3-phosphate. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. 3. Regeneration of RuBP Ribulose 1,5-bisphosphate is regenerated. For every three turns of the cycle, five molecules of Glyceraldehyde 3-phosphate are used to reform three molecules of Ribulose 1,5- bisphosphate. The remaining Glyceraldehyde 3-phosphate is then used to make glucose, fatty acids or glycerol. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Stages Reactants/ Raw Product materials Light Dependent H2O and light NADPH, ATP Reaction and O2 Light Independent NADPH, ATP, and glucose Reaction CO2 LYCEUM OF ALABANG INC.INC. Photorespiration a puzzling phenomenon in which abundant light energy is captured by photosynthesis but little or no net carbon dioxide fixation occurs; common in C3 plants in bright sunlight on hot days produces no food and generates no ATP. LYCEUM OF ALABANG INC.INC. Cellular respiration LYCEUM OF ALABANG INC.INC. Cellular Respiration oxidizing of food molecule like glucose to form carbon dioxide and water. Three stages 1. Glycolysis 2. Kreb’s Cycle/Citric Acid Cycle 3. Electron Transport Chain (ETC) LYCEUM OF ALABANG INC.INC. LYCEUM OF ALABANG INC.INC. Glycolysis – splitting of sugar Two Phases: 1. Energy Investment Phase – ATP is consumed 2. Energy Harvesting Phase – ATP is produced Product: 2NADH, 2 ATP, and 2 PYRUVATE LYCEUM OF ALABANG INC.INC. Aerobic Respiration – an oxygen dependent pathway of ATP formation Anaerobic Respiration – takes place within the cell cytoplasm; without O2 LYCEUM OF ALABANG INC.INC. OXIDATION OF PYRUVATE LYCEUM OF ALABANG INC.INC. Kreb’s Cycle (Citric Acid Cycle) LYCEUM OF ALABANG INC.INC. Kreb’s Cycle (Citric Acid Cycle) Product: 8 NADH 2 ATP 2 FADH 6 CO2 FAD – Flavin Adenine Dinucleotide NAD – Nicotinamide Adenosine Dinucleotide LYCEUM OF ALABANG INC.INC. Electron Transport Chain (ETC) - series of membrane bound carriers in the mitochondria that pass electron from one to another. LYCEUM OF ALABANG INC.INC. Electron Transport Chain LYCEUM OF ALABANG INC.INC. An electron transport chain (ETC) is a series of compounds that transfer electron from electron donors to electron acceptors via redox reactions and couples this electron transfer with the transfer of protons (H+ ions) across a membrane. LYCEUM OF ALABANG INC.INC. This creates an electrochemical proton gradient that drives ATP synthesis, or the generation of chemical energy in the form of adenosine triphosphate (ATP). The final acceptor of electrons in the electron transport chain is molecular OXYGEN. LYCEUM OF ALABANG INC.INC. Cellular Respiration Product : Glycolysis: 2 ATP Kreb’s Cycle: 2 ATP Electron Transport Chain: 32 ATP Total 36 ATP LYCEUM OF ALABANG INC.INC. Transpiration Transpiration is that the process by which a plant loses water, primarily through leaf stomata. The amount of water lost from the plant depends on several environmental factors such as temperature, humidity and wind or air movement. LYCEUM OF ALABANG INC.INC. Transpiration Transpiration An increase in temperature or air movement decreases relative humidity and causes the guard cells in the leaf to shrink, opening the stomata and increasing the rate of transpiration.