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Questions and Answers
What is the beginning of DNA replication?
What is the beginning of DNA replication?
What is the role of DNA polymerase I?
What is the role of DNA polymerase I?
Removes RNA primer and replaces it with newly synthesized DNA.
What does DNA polymerase III do?
What does DNA polymerase III do?
Adds nucleotides in the 5' to 3' direction.
What is the function of helicase?
What is the function of helicase?
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What does ligase do in DNA replication?
What does ligase do in DNA replication?
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What is the role of primase in DNA replication?
What is the role of primase in DNA replication?
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What is the purpose of the sliding clamp?
What is the purpose of the sliding clamp?
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How does topoisomerase help during DNA replication?
How does topoisomerase help during DNA replication?
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What is the function of single-strand binding proteins (SSB)?
What is the function of single-strand binding proteins (SSB)?
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What is a replication fork?
What is a replication fork?
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What is the rate of elongation in bacteria?
What is the rate of elongation in bacteria?
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What is a leading strand?
What is a leading strand?
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What characterizes a lagging strand?
What characterizes a lagging strand?
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What are Okazaki fragments?
What are Okazaki fragments?
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List the steps of DNA replication.
List the steps of DNA replication.
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Study Notes
DNA Replication Overview
- Initiation occurs at a single origin of replication, forming a replication "bubble" as DNA strands separate.
- A replication fork is created, resembling a Y-shape, where elongation of DNA strands happens.
Key Enzymes and Proteins
- Helicase: Unzips the DNA helix by breaking hydrogen bonds between nitrogenous bases.
- DNA polymerase III: Primary enzyme responsible for adding nucleotides in the 5' to 3' direction during replication.
- DNA polymerase I: Replaces RNA primers with newly synthesized DNA segments after initial replication.
- Primase: Synthesizes RNA primers that provide a starting point for DNA synthesis.
- Ligase: Seals gaps between Okazaki fragments on the lagging strand, forming a continuous DNA molecule.
- Topoisomerase: Alleviates tension in the DNA helix by creating temporary breaks before resealing the strands.
- Single-strand binding proteins (SSB): Attach to exposed single-stranded DNA to prevent it from rejoining.
Strands and Their Characteristics
- Leading strand: Synthesized continuously toward the replication fork in the 5' to 3' direction.
- Lagging strand: Discontinuously synthesized away from the replication fork in 3' to 5' direction, creating Okazaki fragments.
Okazaki Fragments
- Short DNA segments synthesized on the lagging strand; necessary due to the nature of DNA's antiparallel structure.
Rate of Elongation
- Bacterial DNA elongates at approximately 500 nucleotides per second.
- Human cells replicate DNA at a rate of about 50 nucleotides per second.
DNA Replication Process Steps
- DNA unwinds at the origin, helicase separates strands, and SSBs prevent rewinding.
- Topoisomerase prevents supercoiling ahead of the replication fork.
- Primase lays down RNA primers, allowing DNA polymerase to start adding nucleotides.
- Following elongation, RNA primers are removed, gaps are filled with DNA, and ligase seals the fragments.
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