Podcast
Questions and Answers
Match the following viral components with their primary functions:
Match the following viral components with their primary functions:
Glycoproteins = Bind to host cells for entry Nucleic acid = Contains the genetic information for viral replication Capsid = Protects the viral genome Enzymes = Carry out specific functions necessary for viral replication
Match the following viral mechanisms with their respective viral families:
Match the following viral mechanisms with their respective viral families:
Self-complementary sequences at the 5' end of the RNA genome = Poliovirus Self-complementary sequences within gene coding sequences = Retroviruses Internal Ribosome Entry Site (IRES) = Poliovirus Pseudoknot formation = Retroviruses
Match the following terms with their corresponding definitions:
Match the following terms with their corresponding definitions:
Stem-loop = A secondary structure in RNA formed by complementary base pairing within a single RNA molecule. Pseudoknot = A complex RNA structure formed by the interaction of two stem-loops. IRES = A sequence in RNA that allows ribosomes to bind and initiate translation without a 5' cap. Frame-shift = A change in the reading frame during translation, resulting in a different amino acid sequence.
Match the following authors with their respective virology textbooks:
Match the following authors with their respective virology textbooks:
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Match the following publishers with their respective virology textbooks:
Match the following publishers with their respective virology textbooks:
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Match the following features with their corresponding viral families:
Match the following features with their corresponding viral families:
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Match the following viruses with their respective host organisms.
Match the following viruses with their respective host organisms.
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Match the following viruses with their respective genome types.
Match the following viruses with their respective genome types.
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Match the following viral characteristics with their corresponding classification categories.
Match the following viral characteristics with their corresponding classification categories.
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Match the following viruses with their primary mode of transmission.
Match the following viruses with their primary mode of transmission.
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Match the following viruses with their respective disease symptoms.
Match the following viruses with their respective disease symptoms.
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Match the following viral genome properties with their relevant descriptions:
Match the following viral genome properties with their relevant descriptions:
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Match the following viral genome features with their relevant examples:
Match the following viral genome features with their relevant examples:
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Match the following replication strategies with their respective descriptions:
Match the following replication strategies with their respective descriptions:
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Match the following aspects of viral gene expression with their descriptions:
Match the following aspects of viral gene expression with their descriptions:
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Match the following terms related to viral gene coding strategy with their definitions:
Match the following terms related to viral gene coding strategy with their definitions:
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Match the following viral genome features with their respective examples:
Match the following viral genome features with their respective examples:
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Match the following viruses with their respective genome characteristics:
Match the following viruses with their respective genome characteristics:
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Match the following viral proteins with their functions:
Match the following viral proteins with their functions:
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Study Notes
Viruses and Virology Overview
- Viruses infect all cellular life (human, animal, plant, bacteria, yeast, fungi)
- Viruses are classified based on various characteristics including; molecular composition of the genome, structure of the virus capsid, presence of an envelope, gene expression strategy (producing virus proteins), host range (cell tropism), infection pathogenicity, and genome sequence similarity and phylogeny.
- The classification system includes Realm, Kingdom, Phylum, Class, Order, Family, Genus, and Species
Virus Structure and Components
- Viruses have similar components to cells, including glycoproteins (spikes/peplomers, bind to cell entry), a membrane (envelope), and a genome (DNA or RNA).
- Proteins in viruses include tegument/matrix, capsid, nucleocapsid, and enzymes (carried inside virion or encoded by genome).
- Viral structural proteins form capsids, which are symmetrical arrangements of the proteins; typical shapes are helical, icosahedral, rod-shaped, and cone-shaped.
- Icosahedral capsids have 20 triangular sides and appear spherical, made of 1-4 different capsid proteins (papillomavirus, poliovirus, herpesviruses, Hepatitis B, and HIV have 2,4,10,1, and 1 capsid proteins respectively).
- Helical capsids form hollow cylinders, often using similar single protein many times and wrapping around the genome (Tobacco mosaic virus, rabies virus and Marburg/Ebola virus).
- Some viruses have complex structures (T4 bacteriophage) combining icosahedral and helical structures.
- Some viruses have an envelope that surrounds the capsid, made of lipids and protein layers.
- Virus glycoproteins are embedded in the envelope and bind to cells for entry. Viral proteins show diversity in structure and function, binding genomes, providing replication primers, or binding ribosomes.
Virus Genomes
- Virus genomes comprise diverse sizes, compositions, conformations, gene coding, and genome copy number (both DNA and RNA based single or double stranded forms.)
- Viral genomes may use unique sequences for protein synthesis in ways like self-annealing into stem-loops, ribosomes binding to RNA without 5' caps, and frame-shift ribosome slippage to increase gene capacity.
Virus Replication
- All virus genomes contain at least one origin of replication (ori).
- Replication strategies include rolling circle, bidirectional (theta), unidirectional, and strand displacement mechanisms.
- All viruses ultimately replicate two complementary nucleic acid strands, even if the genome is single-stranded.
Gene Regulation
- Small virus genomes generally use coordinated gene regulation with shared promoters
- Larger virus genomes usually use independent gene regulation with separate promoters for each gene.
Additional Info
- Common viral misunderstandings clarify that viruses are not cells, not alive (require host cells to replicate), don't grow, don't divide (but replicate), and are not susceptible to antibiotics.
- Suitable virology textbooks for learning include Carter & Saunders, Lostroh, and Howley, Knipe & Whelan.
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Description
This quiz provides an overview of viruses and their classification, including structure and components such as genome, capsids, and envelopes. It covers various characteristics that define different types of viruses. Test your knowledge of virology concepts and virus taxonomy.