181 Lec - PPT6

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Which method is used to divide a group of objects into clusters so that the objects within a cluster are similar but objects taken from different clusters are dissimilar?

Cluster Analysis

What is the purpose of selecting a representative subset of compounds in cluster-based compound selection?

To group together similar objects

What are the key steps involved in cluster-based compound selection?

Generate descriptors, calculate similarity, select representative subset

Which method aims to find a line that best separates the active and inactive molecules?

Discriminant Analysis

What does the discriminant function in a linear discriminant analysis represent?

The value computed for a new molecule

What type of neural network consists of layers of nodes with connections between all pairs of nodes in adjacent layers?

Feed-Forward Neural Network

What is the key objective of Data Mining Methods?

To identify relationships in large, multidimensional data sets

Which method measures the intercluster distance as the average of the distances between all pairs of compounds in the two clusters?

Group average method

How can the appropriate number of clusters be determined in hierarchical clustering?

By selecting a level from the hierarchy

In cell-based or partitioning methods, how is the multidimensional space divided into cells?

By dividing each property into a series of value ranges

Which method maps a multidimensional data set to a lower 2D or 3D space to visualize it?

Multidimensional scaling

Which technique attempts to find a boundary or hyperplane that separates two classes of compounds?

Support Vector Machines

What is the purpose of ensemble approaches in machine learning?

To create collections of trees

What is the main disadvantage of Support Vector Machines (SVM)?

It is a black box method

What is the purpose of modifying the vectors of the winning node and its neighbors in a Kohonen network?

To create regions containing similar nodes

Explore the world of data mining methods used to identify relationships in large, multidimensional data sets. Learn about the key objective of constructing models to identify relationships between chemical structure and observed activity. Discover why traditional QSAR methods like MLR may not be applicable in certain cases, and how HTS data sets classify molecules.

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