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What is the fundamental unit of life in biology?
What is the fundamental unit of life in biology?
What type of cells are involved in moving your eyes as you read this sentence?
What type of cells are involved in moving your eyes as you read this sentence?
What is the function of nerve cells in the process of reading?
What is the function of nerve cells in the process of reading?
What is the level of organization that consists of many specialized cells that could not survive on their own?
What is the level of organization that consists of many specialized cells that could not survive on their own?
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What is the characteristic shared by all cells?
What is the characteristic shared by all cells?
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What is the term for the process of cells becoming more specialized and complex over time?
What is the term for the process of cells becoming more specialized and complex over time?
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What is the type of organism that exists as a single cell?
What is the type of organism that exists as a single cell?
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What is the purpose of studying the cell and its components?
What is the purpose of studying the cell and its components?
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When was the microscope invented?
When was the microscope invented?
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Who first saw cell walls using a microscope?
Who first saw cell walls using a microscope?
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What is the primary function of lenses in a light microscope?
What is the primary function of lenses in a light microscope?
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What is the term for the ratio of an object's image size to its real size?
What is the term for the ratio of an object's image size to its real size?
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Up to what magnification can light microscopes effectively magnify?
Up to what magnification can light microscopes effectively magnify?
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What is the term for the minimum distance two points can be separated and still be distinguished as separate points?
What is the term for the minimum distance two points can be separated and still be distinguished as separate points?
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What is the main limitation of a light microscope in resolving detail?
What is the main limitation of a light microscope in resolving detail?
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What type of microscopes are commonly used by scientists, including Renaissance scientists?
What type of microscopes are commonly used by scientists, including Renaissance scientists?
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What is the purpose of staining or labeling cell components in microscopy?
What is the purpose of staining or labeling cell components in microscopy?
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What is the main difference between a light microscope and an electron microscope?
What is the main difference between a light microscope and an electron microscope?
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What is the term for the clarity of the image in a microscope?
What is the term for the clarity of the image in a microscope?
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What is the theoretical resolution limit of a modern electron microscope?
What is the theoretical resolution limit of a modern electron microscope?
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What is the main advantage of an electron microscope over a light microscope?
What is the main advantage of an electron microscope over a light microscope?
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What is the primary use of a scanning electron microscope (SEM)?
What is the primary use of a scanning electron microscope (SEM)?
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What is the advantage of the super-resolution technique shown in the image?
What is the advantage of the super-resolution technique shown in the image?
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What does the deconvolution software do?
What does the deconvolution software do?
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What is the function of cilia as shown in the SEM micrograph?
What is the function of cilia as shown in the SEM micrograph?
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What type of micrograph shows a 3-D image of the surface of a specimen?
What type of micrograph shows a 3-D image of the surface of a specimen?
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What is the advantage of using electron microscopy over light microscopy?
What is the advantage of using electron microscopy over light microscopy?
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What is the purpose of staining or labeling cell components in microscopy?
What is the purpose of staining or labeling cell components in microscopy?
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What type of microscopy is used to profile a thin section of a specimen?
What type of microscopy is used to profile a thin section of a specimen?
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What is the typical diameter of the vesicles shown in the confocal image?
What is the typical diameter of the vesicles shown in the confocal image?
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What is the primary purpose of staining in brightfield microscopy?
What is the primary purpose of staining in brightfield microscopy?
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What is the main advantage of phase-contrast microscopy over brightfield microscopy?
What is the main advantage of phase-contrast microscopy over brightfield microscopy?
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What is the principle behind fluorescence microscopy?
What is the principle behind fluorescence microscopy?
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What is the main difference between a standard fluorescence micrograph and a confocal image?
What is the main difference between a standard fluorescence micrograph and a confocal image?
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What is the advantage of using deconvolution in microscopy?
What is the advantage of using deconvolution in microscopy?
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Which type of microscopy is particularly useful for examining living, unpigmented cells?
Which type of microscopy is particularly useful for examining living, unpigmented cells?
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What is the purpose of using fluorescent dyes or antibodies in microscopy?
What is the purpose of using fluorescent dyes or antibodies in microscopy?
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Which type of microscopy produces an image that appears almost 3-D?
Which type of microscopy produces an image that appears almost 3-D?
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What is the main purpose of coating a specimen with a thin film of gold in a scanning electron microscope?
What is the main purpose of coating a specimen with a thin film of gold in a scanning electron microscope?
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What is the primary difference between a scanning electron microscope and a transmission electron microscope?
What is the primary difference between a scanning electron microscope and a transmission electron microscope?
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Why are electromagnets used as lenses in electron microscopes?
Why are electromagnets used as lenses in electron microscopes?
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What is a disadvantage of electron microscopy?
What is a disadvantage of electron microscopy?
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Why is staining or labeling cell components used in microscopy?
Why is staining or labeling cell components used in microscopy?
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What is the advantage of the scanning electron microscope over the transmission electron microscope?
What is the advantage of the scanning electron microscope over the transmission electron microscope?
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What is a recent advancement in light microscopy?
What is a recent advancement in light microscopy?
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What is a limitation of specimen preparation for microscopy?
What is a limitation of specimen preparation for microscopy?
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What is the primary advantage of super-resolution microscopy?
What is the primary advantage of super-resolution microscopy?
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What is the main purpose of cell fractionation?
What is the main purpose of cell fractionation?
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What is the role of the centrifuge in cell fractionation?
What is the role of the centrifuge in cell fractionation?
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What is the relationship between cytology and biochemistry?
What is the relationship between cytology and biochemistry?
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What did researchers discover about mitochondria using cell fractionation and biochemical tests?
What did researchers discover about mitochondria using cell fractionation and biochemical tests?
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What is the benefit of using fluorescent markers in microscopy?
What is the benefit of using fluorescent markers in microscopy?
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What is the significance of confocal microscopy?
What is the significance of confocal microscopy?
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What is the importance of microscopes in the study of cell structure?
What is the importance of microscopes in the study of cell structure?
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What is the primary difference between prokaryotic and eukaryotic cells with regard to their DNA?
What is the primary difference between prokaryotic and eukaryotic cells with regard to their DNA?
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What is the function of the ribosomes in cells?
What is the function of the ribosomes in cells?
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What is the term for the semifluid, jellylike substance inside cells where subcellular components are suspended?
What is the term for the semifluid, jellylike substance inside cells where subcellular components are suspended?
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What is the general term for organisms that consist of eukaryotic cells?
What is the general term for organisms that consist of eukaryotic cells?
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What is the purpose of the plasma membrane in cells?
What is the purpose of the plasma membrane in cells?
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What is the characteristic shared by all cells?
What is the characteristic shared by all cells?
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Study Notes
The Fundamental Units of Life: Cells
- Cells are the basic units of life, similar to atoms in chemistry, and are essential to understanding biological systems.
- Many different types of cells work together in an organism, each with unique functions, such as muscle cells that help move eyes and nerve cells that transmit signals to the brain.
Cellular Structure and Function
- Cells are the simplest units of matter that can be considered living entities, and all organisms are composed of cells.
- Single-celled organisms, such as Paramecium, exist, while larger organisms are multicellular, consisting of many specialized cells that work together.
Evolutionary History of Cells
- All cells share a common ancestry, having descended from earlier cells.
- Over time, cells have evolved and diversified into different types, despite sharing common features.
Cellular Components and Organization
- Cells are organized into higher levels, such as tissues and organs, but remain the basic unit of structure and function in an organism.
- The cell's components and functions will be explored in this chapter.
Microscopy
- Biologists use microscopes to study cells, which are too small to be seen by the unaided eye.
- Microscopes were invented in 1590 and further refined during the 1600s.
- Cell walls were first seen by Robert Hooke in 1665 using a microscope.
- Antoni van Leeuwenhoek was able to visualize living cells using his crafted lenses.
- Light microscopes (LM) use visible light passed through the specimen and then through glass lenses to magnify the image.
- Three important parameters in microscopy are magnification, resolution, and contrast.
- Magnification is the ratio of an object's image size to its real size, up to 1,000 times the actual size of the specimen.
- Resolution is a measure of the clarity of the image, with a minimum distance of 0.2 micrometer (µm) or 200 nanometers (nm) for light microscopes.
- Contrast is the difference in brightness between the light and dark areas of an image, and can be enhanced through staining or labeling cell components.
Electron Microscopy
- The electron microscope (EM) was introduced to biology in the 1950s to study organelles in eukaryotic cells.
- Electron microscopes focus a beam of electrons through the specimen or onto its surface.
- The resolution of electron microscopes is inversely related to the wavelength of the electrons used, achieving a theoretical resolution of about 0.002 nm.
- In practice, electron microscopes can resolve structures as small as 2 nm across, a 100-fold improvement over standard light microscopes.
- The scanning electron microscope (SEM) is especially useful for detailed study of the topography of cells.
Light Microscopy
- Brightfield microscopy: light passes directly through the specimen, but image has little contrast unless the cell is naturally pigmented or artificially stained.
- Staining with dyes enhances contrast, but most staining procedures require cell fixation, which kills the cells.
- Phase-contrast microscopy: variations in density within the specimen are amplified to enhance contrast in unstained cells.
- Differential interference contrast (Nomarski): optical modifications are used to exaggerate differences in density, creating a 3-D image.
- Fluorescence microscopy: specific molecules in the cell are revealed by labeling with fluorescent dyes or antibodies; fluorescent substances absorb ultraviolet radiation and emit visible light.
Confocal and Deconvolution Microscopy
- Confocal microscopy: uses a laser to eliminate out-of-focus light, creating a single plane of fluorescence in the image.
- Deconvolution: digitally removes out-of-focus light and reassigns it to its source, creating a sharper 3-D image.
Super-Resolution Microscopy
- Super-resolution microscopy: uses sophisticated equipment to light up individual fluorescent molecules and record their position, allowing for resolution beyond the 200-nm limit.
Electron Microscopy
- Scanning electron microscopy (SEM): produces 3-D images of the surface of a specimen.
- Transmission electron microscopy (TEM): profiles a thin section of a specimen, revealing its internal structure.
Electron Microscopy
- Scanning Electron Microscope (SEM) is used for detailed study of specimen topography, producing a 3D image of the surface.
- SEM operates by scanning the surface of a gold-coated sample with an electron beam, which excites electrons that are detected and translated into an electronic signal.
- Transmission Electron Microscope (TEM) is used to study internal structure of cells by aiming an electron beam through a thin section of the specimen.
- TEM uses heavy metal atoms to stain certain cellular structures, enhancing electron density and producing an image displaying the pattern of transmitted electrons.
Electron Microscopy vs. Light Microscopy
- Electron microscopes have revealed many subcellular structures that were impossible to resolve with light microscopy.
- However, light microscopy offers advantages in studying living cells.
- Electron microscopy requires specimen preparation methods that kill the cells, whereas light microscopy allows for observation of living cells.
Advances in Light Microscopy
- Labeling individual cellular molecules or structures with fluorescent markers has made it possible to see structures with increasing detail.
- Confocal and deconvolution microscopy have produced sharper images of three-dimensional tissues and cells.
- Super-resolution microscopy has enabled researchers to distinguish subcellular structures as small as 10-20 nm across.
Cell Fractionation
- Cell fractionation is a technique used to study cell structure and function by separating major organelles and subcellular structures from one another.
- The centrifuge is used to spin test tubes holding mixtures of disrupted cells at increasing speeds, causing cell components to settle to the bottom of the tube.
- Cell fractionation enables researchers to prepare specific cell components in bulk and identify their functions, correlating cell function with structure.
Integration of Cytology and Biochemistry
- Cytology is the study of cell structure, while biochemistry is the study of the chemical processes (metabolism) of cells.
- Understanding cell function requires the integration of cytology and biochemistry.
- Cell fractionation and electron microscopy have helped biologists determine the functions of specific cell components, such as mitochondria being the sites of cellular respiration.
Cell Structure and Function
- Cells are the basic structural and functional units of every organism.
- There are two distinct types of cells: prokaryotic and eukaryotic.
Characteristics of Cells
- All cells are bounded by a selective barrier called the plasma membrane (or cell membrane).
- Cells contain a semifluid, jellylike substance called cytosol, where subcellular components are suspended.
- All cells have chromosomes, which carry genes in the form of DNA.
- Cells have ribosomes, which make proteins according to instructions from the genes.
Comparison of Prokaryotic and Eukaryotic Cells
- A major difference between prokaryotic and eukaryotic cells is the location of their DNA.
- In eukaryotic cells, most of the DNA is in the nucleus, which is bounded by a double membrane.
- In prokaryotic cells, the DNA is concentrated in a region called the nucleoid, which is not membrane-enclosed.
Organisms and Their Cell Types
- Organisms of the domains Bacteria and Archaea consist of prokaryotic cells.
- Protists, fungi, animals, and plants all consist of eukaryotic cells.
- Protists are a diverse group of mostly unicellular eukaryotes.
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Description
Learn about the fundamental units of life, cells, and their unique functions and structures in organisms.