TCA
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Questions and Answers

What are the main products generated from one acetyl-CoA entering the TCA cycle?

  • 2 FADH2, 10 H+, and 2 CO2
  • 3 CO2, 2 NADH, and ADP
  • 6 CO2, 10 NADH, and 4 ATP
  • 2 CO2, 3 NADH, FADH2, CoASH, and ATP (correct)

In the complete oxidation of acetate, what role do electron carriers play?

  • They convert NAD+ into glucose.
  • They directly produce ATP without the need for further reactions.
  • They substitute the need for glucose metabolism.
  • They help conserve free energy by transporting electrons. (correct)

What effect does glycolysis have on the TCA cycle?

  • It decreases the overall energy yield of cellular respiration.
  • It generates pyruvate which is converted to acetyl-CoA for entry into the TCA cycle. (correct)
  • It eliminates the need for the TCA cycle.
  • It produces oxygen required for the TCA cycle.

During the complete oxidation of glucose through glycolysis and the TCA cycle, how many CO2 molecules are produced?

<p>6 CO2 (C)</p> Signup and view all the answers

Why is the oxidation of acetyl-CoA to CO2 significant in metabolism?

<p>It releases energy that is stored in the form of ATP and electron carriers. (D)</p> Signup and view all the answers

What is the role of pyruvate dehydrogenase (E1) in the reaction?

<p>It catalyzes the conversion of pyruvate to acetyl CoA. (A)</p> Signup and view all the answers

Which molecule participates first in the nucleophilic attack in the pyruvate dehydrogenase reaction?

<p>Hydroxyethyl TPP (A)</p> Signup and view all the answers

What by-product is formed upon the departure of CO2 during the reaction?

<p>Hydroxyethyl TPP (A)</p> Signup and view all the answers

What happens to TPP after the transfer of the hydroxyethyl group?

<p>It is eliminated. (D)</p> Signup and view all the answers

Which compound is formed when the hydroxyethyl group is added to the lipoamide moiety?

<p>Hydroxyethyl lipoamide (B)</p> Signup and view all the answers

What is the final product transferred to CoA in this reaction sequence?

<p>Acetyl group (A)</p> Signup and view all the answers

During which step is the hydroxyethyl carbanion generated?

<p>Nucleophilic attack (B)</p> Signup and view all the answers

What is the final role of dihydrolipoamide in the reaction sequence?

<p>It captures the acetyl group. (A)</p> Signup and view all the answers

What spectral peak is observed when NAD+ is reduced to NADH?

<p>340 nm (A)</p> Signup and view all the answers

What is the primary reason the Krebs cycle is referred to as the Tricarboxylic Acid (TCA) cycle?

<p>It contains three carboxylic acid groups in citrate and isocitrate. (C)</p> Signup and view all the answers

Which enzyme of the TCA cycle is membrane-bound and what cofactor does it utilize?

<p>Succinate dehydrogenase, FAD (A)</p> Signup and view all the answers

How many enzymes in the TCA cycle function far from equilibrium under physiological conditions?

<p>3 (C)</p> Signup and view all the answers

What is the primary function of the keto group in the decarboxylation process?

<p>To act as an electron sink (C)</p> Signup and view all the answers

Which coenzyme is involved in the mechanism of the α-ketoglutarate dehydrogenase?

<p>TPP (C)</p> Signup and view all the answers

Which of the following statements about the TCA cycle is incorrect?

<p>It generates ATP directly in each cycle. (A)</p> Signup and view all the answers

What is produced alongside NADH during the oxidative decarboxylation of α-keto acids?

<p>Succinyl-CoA (B)</p> Signup and view all the answers

Which enzyme is NOT part of the multienzyme complex involved in α-ketoglutarate dehydrogenase?

<p>Pyruvate kinase (E4) (A)</p> Signup and view all the answers

How does Mn2+ interact with the carbonyl group during the dehydrogenase reaction?

<p>It coordinates to polarize the electronic charge (A)</p> Signup and view all the answers

What effect does the oxidative decarboxylation have on cellular metabolism?

<p>It increases the production of NADH and succinyl-CoA (C)</p> Signup and view all the answers

What pathway can NADH from the dehydrogenase reaction follow?

<p>It can be routed through the electron transport chain (B)</p> Signup and view all the answers

What distinguishes the α-ketoglutarate dehydrogenase reaction from others in the citric acid cycle?

<p>It involves a decarboxylation step releasing CO2 (C)</p> Signup and view all the answers

What inhibits the activity of the pyruvate dehydrogenase complex (PDC)?

<p>Acetyl-CoA and NADH (B)</p> Signup and view all the answers

Which of the following is an anaplerotic pathway for the TCA cycle?

<p>Pyruvate carboxylase (D)</p> Signup and view all the answers

Through which compound do valine and isoleucine enter the TCA cycle?

<p>Succinyl-CoA (B)</p> Signup and view all the answers

What is the DGo' value for the hydrolysis of the thioester bond of Acetyl-CoA?

<p>-31.5 KJ/mol (C)</p> Signup and view all the answers

Which metabolic process is primarily responsible for generating precursor molecules for the TCA cycle?

<p>Transamination (C)</p> Signup and view all the answers

Which two compounds are generated as intermediates in the TCA cycle through transamination?

<p>Oxaloacetate and α-ketoglutarate (A)</p> Signup and view all the answers

Which compound is formed from the reversible conversion of glutamate in many tissues?

<p>α-Ketoglutarate (A)</p> Signup and view all the answers

What platform does odd-chain fatty acid oxidation primarily feed into the TCA cycle?

<p>Succinyl-CoA (D)</p> Signup and view all the answers

What is the primary function of FAD in the oxidation of alkanes?

<p>To oxidize alkanes to alkenes (B)</p> Signup and view all the answers

Which molecule is oxidized by NAD+ during the metabolic processes described?

<p>Alcohols (A)</p> Signup and view all the answers

What does FADH2 reduce in the electron transport chain?

<p>Coenzyme Q (D)</p> Signup and view all the answers

Which enzyme is described as the only membrane-bound TCA cycle enzyme?

<p>Succinate dehydrogenase (C)</p> Signup and view all the answers

What is the outcome when succinate is oxidized in the presence of FAD?

<p>FADH2 is produced (D)</p> Signup and view all the answers

What type of reaction characterizes the process involving succinate and FAD?

<p>Redox reaction (B)</p> Signup and view all the answers

What role does CoA-SH play in the context of succinate dehydrogenase?

<p>It is involved in the citric acid cycle (D)</p> Signup and view all the answers

What is generated alongside NADH during the oxidation of succinate?

<p>GTP (B)</p> Signup and view all the answers

What does the oxidation of an alkane to an alkene achieve in terms of energy change?

<p>It is an exergonic process (C)</p> Signup and view all the answers

What is the fate of electrons during the oxidation of succinate?

<p>They are transferred to FAD (D)</p> Signup and view all the answers

Flashcards

Pyruvate Dehydrogenase Reaction

A multi-step reaction catalyzed by an enzyme complex to convert pyruvate to acetyl-CoA, a crucial step in cellular respiration.

TPP's Role

Thiamine pyrophosphate (TPP) acts as a coenzyme, facilitating the nucleophilic attack on pyruvate.

Carbon Dioxide Release

Step in the reaction where carbon dioxide is detached from pyruvate.

Hydroxyethyl-TPP Formation

TPP temporarily reacts with pyruvate, forming a hydroxyethyl derivative bound to TPP.

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Lipoamide Transfer

Hydroxyethyl group is transferred to lipoamide, a coenzyme.

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Acetyl-CoA Formation

The final step where Acetyl-CoA is produced.

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Enzyme Complex Role

Pyruvate dehydrogenase complex coordinates the reaction steps for optimal efficiency.

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Coenzyme A (CoA)

A coenzyme that accepts the acetyl group, forming acetyl-CoA.

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α-ketoglutarate dehydrogenase

Enzyme that catalyzes the oxidative decarboxylation of α-ketoglutarate, releasing CO2 and NADH.

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Oxidative decarboxylation

A process involving oxidation (loss of electrons) and the removal of a carboxyl group (COOH).

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NAD+-dependent

A reaction requiring NAD+ as a coenzyme/electron carrier.

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Citric Acid Cycle

A metabolic pathway that produces energy and intermediates through a series of enzymatic reactions.

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Succinyl-CoA Synthetase

Enzyme that catalyzes the formation of Succinyl-CoA from a substrate.

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Electron Transport Pathway

A series of protein complexes that transfer electrons to generate ATP.

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Oxidative Phosphorylation

Process that uses energy from electron transport to produce ATP.

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Multienzyme complex

A group of enzymes working together in a coordinated manner.

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FAD oxidation of alkanes

FAD oxidizes alkanes to alkenes, as the oxidation reaction is exergonic enough to reduce FAD to FADH2.

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NAD+ oxidation of alcohols

NAD+ oxidizes alcohols to aldehydes or ketones.

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Succinate Dehydrogenase

A membrane-bound TCA cycle enzyme; the only one.

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FADH2 reoxidation

FADH2 is reoxidized by coenzyme Q in the electron transport chain.

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Succinate oxidation

Succinate is oxidized.

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FAD reduction

FAD is reduced during succinate oxidation.

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Redox reaction

A chemical reaction involving the transfer of electrons between species, often used for energy production.

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TCA cycle enzyme

The enzymes are involved in the steps of the Citric Acid cycle, a common metabolic pathway.

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Oxidation of Succinate

Succinate is oxidized to oxidize FAD to FADH2.

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TCA Cycle: Energy Output

The TCA cycle generates ATP, NADH, and FADH2 as energy carriers. One turn of the cycle produces 1 ATP, 3 NADH, and 1 FADH2. This energy is further utilized in oxidative phosphorylation to generate more ATP.

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Acetyl-CoA's Role

Acetyl-CoA carries two carbon atoms into the TCA cycle. These carbons are ultimately oxidized to CO2, releasing energy captured by electron carriers.

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TCA Cycle: Oxidative Process

The TCA cycle involves the complete oxidation of acetate to CO2. This process generates a significant amount of energy that is conserved by electron carriers like NADH and FADH2.

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Glucose Complete Oxidation

The combined action of glycolysis and the TCA cycle results in the complete oxidation of glucose to CO2, generating energy in the form of ATP, NADH, and FADH2.

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Electron Carriers: TCA's Importance

NADH and FADH2, produced in the TCA cycle, transport electrons to the electron transport chain, driving ATP synthesis through oxidative phosphorylation.

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NAD+ Reduction Observation

The reduction of NAD+ to NADH can be observed spectroscopically by a shift in the UV absorption spectrum. NAD+ absorbs maximally at 260 nm, while NADH absorbs maximally at 340 nm.

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Tricarboxylic Acid Cycle

The Krebs cycle is also known as the tricarboxylic acid (TCA) cycle because it involves molecules with three carboxyl groups, such as citrate and isocitrate.

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Membrane-Bound TCA Enzyme

Complex I, one of the enzymes in the TCA cycle, is membrane-bound and utilizes FAD as a cofactor in its catalytic reaction.

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TCA Enzymes Far from Equilibrium

Three enzymes in the TCA cycle are likely to function far from equilibrium under physiological conditions. These enzymes have a negative delta G, indicating that the reaction is thermodynamically favorable and proceeds spontaneously.

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Thiazolium Ring

The thiazolium ring is a crucial component of thiamine pyrophosphate (TPP), a coenzyme involved in the pyruvate dehydrogenase complex reaction.

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PDC Activity: NADH & Acetyl-CoA

NADH and Acetyl-CoA inhibit the Pyruvate Dehydrogenase Complex (PDC) by competing with NAD+ and CoA, respectively, in specific reaction steps.

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Anaplerotic Pathways

Metabolic pathways that replenish intermediates of the TCA cycle, like oxaloacetate, to maintain its function.

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Pyruvate Carboxylase

A key anaplerotic enzyme that converts pyruvate into oxaloacetate, a TCA cycle intermediate.

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Transaminases (TA)

Enzymes that transfer amino groups, facilitating the reversible conversion of glutamate to α-ketoglutarate.

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TCA Cycle: Biosynthetic Precursors

The TCA cycle produces key intermediates that serve as building blocks for biosynthesis pathways.

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Acetyl-CoA Thioester Bond Hydrolysis

Breaking the thioester bond in Acetyl-CoA releases a significant amount of energy, making it a high-energy compound.

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Thiazolium Ring in TPP

The thiazolium ring in Thiamine Pyrophosphate (TPP) contains a reactive carbon that facilitates reactions within the pyruvate dehydrogenase complex.

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TPP's Role in PDC

Thiamine Pyrophosphate (TPP) is a crucial coenzyme in the Pyruvate Dehydrogenase Complex, facilitating the decarboxylation of pyruvate.

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Study Notes

Tricarboxylic Acid (TCA) Cycle

  • The TCA cycle, also known as the Krebs cycle or citric acid cycle, is a crucial metabolic pathway.

  • It's a central part of cellular respiration, oxidizing acetyl-CoA to carbon dioxide.

  • The cycle involves eight steps, each catalyzed by a specific enzyme.

  • Acetyl-CoA enters the cycle by combining with oxaloacetate, forming citrate.

  • The seven subsequent steps decompose citrate back to oxaloacetate, creating a cyclical process.

  • NADH and FADH2 are produced during the cycle, crucial for electron transport.

  • The cycle relays electrons extracted from food to the electron transport chain.

  • The cycle provides a way to cleave a two-carbon compound such as acetate to carbon dioxide.

  • A common type of C-C cleavage is a-cleavage.

  • Neither cleavage strategies are suitable for acetate. Instead, living things use the clever chemistry of condensing acetate to oxaloacetate and undergoing a B-cleavage.

  • The TCA cycle combines this B-cleavage reaction with oxidation to form CO2, regenerate oxaloacetate, and capture the liberated metabolic energy in NADH and ATP.

  • Important intermediates for biosynthetic processes are produced by the Citric Acid Cycle including carbohydrates, amino acids, lipids and other molecules such as porphyrins.

  • Pyruvate carboxylase and glutamate are two major anaplerotic pathways.

  • The pyruvate dehydrogenase complex links glycolysis to the TCA cycle.

  • The Pyruvate Dehydrogenase Multienzyme Complex (PDC) is a cluster of three enzymes catalyzing the conversion of pyruvate to acetyl-CoA.

  • PDC requires five cofactors including thiamine pyrophosphate (TPP), lipoic acid, coenzyme A, flavin adenine dinucleotide (FAD), and NAD+.

  • The reaction occurs in the mitochondrial matrix.

  • The dihydrolipoyl transacetylase is the core of the complex.

  • The 24 subunits of the Eâ‚‚ form a particle having cubic symmetry.

  • The 24 pyruvate dehydrogenase subunits form dimers and associate with the Eâ‚‚ core at the centers of the 12 edges.

  • The 12 dihydrolipoyl dehydrogenase form dimers and attach to the E2 cube at the centers of the 6 faces.

  • The coenzymes and prosthetic groups for the PDC include thiamine pyrophosphate (TPP), lipoic acid, coenzyme A (CoA), flavin adenine dinucleotide (FAD), and nicotinamide adenine dinucleotide (NAD+).

  • In the TCA cycle, carbons come from acetyl-CoA and are oxidized to CO2, the cycle regenerates oxaloacetate, and captures energy in NADH and ATP.

  • Key enzymes and their roles in the TCA cycle are detailed (including their enzyme-bound cofactors & the reactions they catalyze).

  • The regulation of the TCA cycle includes product inhibition (e.g., citrate inhibits citrate synthase) and control by ADP, NADH and Ca2+.

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Lecture 3- TCA Cycle PDF

Description

Explore the Tricarboxylic Acid (TCA) Cycle, a vital metabolic pathway known for its role in cellular respiration. This quiz covers the cycle's eight steps, enzyme interactions, and the production of NADH and FADH2. Understand how acetyl-CoA transforms into carbon dioxide through this intricate process.

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