Transcription Process Overview

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Questions and Answers

What is required for eukaryotic transcription initiation in vivo?

  • Chromatin-modifying enzymes
  • Mediator protein complex (correct)
  • RNA polymerase II
  • Transcriptional activators

Which proteins are involved in facilitating the assembly of the transcription initiation machinery onto DNA in eukaryotic cells?

  • Histone-modifying enzymes
  • Mediator protein complex
  • RNA polymerase II
  • Chromatin remodeling complexes (correct)

How many individual subunits approximately need to assemble at the start point of transcription to initiate transcription in a eukaryotic cell?

  • Well over 100 subunits (correct)
  • Around 50 subunits
  • Exactly 100 subunits
  • Less than 100 subunits

What is necessary for RNA polymerase II to begin transcribing?

<p>Release from a large complex of proteins (D)</p> Signup and view all the answers

What characterizes the movement of RNA polymerase after transcription initiation?

<p>Jerkily, pausing at some DNA sequences (B)</p> Signup and view all the answers

What happens after the process of abortive initiation is overcome?

<p>The core enzyme breaks free of interactions with the promoter DNA. (B)</p> Signup and view all the answers

What happens when the polymerase encounters a terminator signal?

<p>The polymerase releases both the newly made RNA molecule and the DNA template. (C)</p> Signup and view all the answers

What is the role of the σ factor in transcription termination?

<p>It aids in forming a hairpin structure at the terminator signal. (A)</p> Signup and view all the answers

How does the transcription bubble change as the polymerase moves down the DNA?

<p>It continually expands at the front and contracts at the rear of the polymerase. (B)</p> Signup and view all the answers

What characterizes a termination signal in most bacterial genes?

<p>A sequence rich in adenine-thymine pairs. (C)</p> Signup and view all the answers

What is the role of TFIIH in the transcription initiation complex formation?

<p>Unwinding the DNA by hydrolyzing ATP (B)</p> Signup and view all the answers

What is the significance of the C-terminal domain (CTD) of RNA polymerase during transcription initiation?

<p>Receives phosphate groups necessary for conformational changes (B)</p> Signup and view all the answers

Which subunit of TFIIH enables RNA polymerase II to move away from the promoter and enter elongation?

<p>Kinase (D)</p> Signup and view all the answers

What is the function of RNA polymerase II at the promoter before entering the elongation phase?

<p>Synthesizing long lengths of RNA (B)</p> Signup and view all the answers

How does RNA polymerase II gain access to the template strand at the transcription start point?

<p>By unwinding the DNA with a DNA helicase (A)</p> Signup and view all the answers

Which DNA sequence is considered the most important for most polymerase II promoters for transcription initiation?

<p>TATA box sequence (D)</p> Signup and view all the answers

What is the function of TFIID in transcription initiation?

<p>Induces a large distortion in the TATA box DNA (D)</p> Signup and view all the answers

Which statement accurately describes the role of TFIIB in transcription initiation?

<p>Accurately positions RNA polymerase at the start site of transcription (C)</p> Signup and view all the answers

Where are most of the DNA sequences that influence transcription initiation located in relation to the transcription start point?

<p>Upstream (D)</p> Signup and view all the answers

What role does the DPE sequence play in transcription initiation?

<p>Brings DNA sequences closer together at the promoter (B)</p> Signup and view all the answers

What is the function of the sigma (σ) factor in the RNA polymerase holoenzyme complex?

<p>Assisting in reading signals in DNA to locate the starting point for transcription (B)</p> Signup and view all the answers

What is the role of the transcription bubble during RNA synthesis?

<p>Acting as a template for complementary base-pairing with ribonucleotides (C)</p> Signup and view all the answers

What happens when the polymerase holoenzyme slides into a promoter sequence?

<p>It binds tightly to the DNA due to specific interactions with σ factor (D)</p> Signup and view all the answers

Why does the RNA polymerase holoenzyme dissociate when it collides with bacterial DNA?

<p>Due to weak binding between the core enzyme and σ factor (B)</p> Signup and view all the answers

What is the main reason why several attempts to start polymerization often do not succeed?

<p>Multiple possible sites for initiation that fail to initiate synthesis (D)</p> Signup and view all the answers

What happens to most of the general transcription factors once RNA polymerase II begins elongating the RNA transcript?

<p>They are released from the DNA to initiate another round of transcription. (D)</p> Signup and view all the answers

What additional function does the phosphorylation of the tail of RNA polymerase II serve?

<p>It allows for components of the RNA-processing machinery to load onto the polymerase. (A)</p> Signup and view all the answers

How does DNA packaging in eukaryotic cells affect transcription initiation complexity?

<p>It complicates initiation, requiring more proteins due to nucleosome packaging. (D)</p> Signup and view all the answers

What role do activator, mediator, and chromatin-modifying proteins play in eukaryotic transcription initiation?

<p>They are required for the assembly of the transcription initiation machinery onto DNA. (A)</p> Signup and view all the answers

How do processing proteins interact with the nascent RNA molecule during transcription?

<p>They hop from the polymerase tail onto the emerging RNA to begin processing. (B)</p> Signup and view all the answers

What is the main difference in the type of nucleotides linked by RNA polymerase compared to DNA polymerase?

<p>Ribonucleotides instead of deoxyribonucleotides (D)</p> Signup and view all the answers

What unique capability does RNA polymerase have in initiating RNA chains compared to DNA polymerases?

<p>Can start without a primer (B)</p> Signup and view all the answers

How does the processivity of RNA polymerase differ from that of DNA polymerases?

<p>RNA polymerases are absolutely processive, DNA polymerases are not (A)</p> Signup and view all the answers

What characterizes the initiation of transcription in gene expression?

<p>The point at which the cell regulates protein production (B)</p> Signup and view all the answers

How does the recognition of start and stop points by RNA polymerase differ between bacteria and eukaryotes?

<p>It differs somewhat between the two (D)</p> Signup and view all the answers

What is a significant feature of RNA polymerases regarding dissociation from the DNA template during transcription?

<p>Must finish without dissociating (B)</p> Signup and view all the answers

What is one key role of initiation in transcription in regulating gene expression?

<p>Determining which proteins are produced and at what rate (D)</p> Signup and view all the answers

How does the ability to start an RNA chain without a primer benefit RNA polymerase?

<p>Increases efficiency in gene transcription (D)</p> Signup and view all the answers

'Processivity' in terms of RNA polymerases refers to:

<p>'Finishing' an RNA molecule without interruptions (B)</p> Signup and view all the answers

'Signals Encoded in DNA Tell RNA Polymerase Where to Start and Stop' - This statement highlights:

<p>'Recognition' points for initiation and termination of transcription (C)</p> Signup and view all the answers

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