Structure-Function of Myoglobin and Hemoglobin
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Questions and Answers

What is the main function of myoglobin?

Myoglobin is responsible for storing oxygen in muscles.

What are the two main functions of hemoglobin?

Hemoglobin is responsible for transporting oxygen and carbon dioxide throughout the body. It also helps in blood buffering.

What type of protein are both myoglobin and hemoglobin?

Both myoglobin and hemoglobin are hemoproteins.

What does the protein environment dictate?

<p>The function of the heme (D)</p> Signup and view all the answers

What type of protein is myoglobin?

<p>Myoglobin is a monomeric protein.</p> Signup and view all the answers

Where is myoglobin mainly found?

<p>Myoglobin is mainly found in muscle tissue.</p> Signup and view all the answers

What are the two forms in which myoglobin can exist?

<p>Myoglobin can exist as oxymyoglobin (oxygen-bound) and deoxymyoglobin (oxygen-free).</p> Signup and view all the answers

Describe the tertiary structure of myoglobin.

<p>The tertiary structure of myoglobin consists of 8 alpha-helices, designated A through H, connected by short non-helical regions.</p> Signup and view all the answers

Amino acid R-groups exposed on the surface of a globular protein are typically hydrophobic.

<p>False (B)</p> Signup and view all the answers

Myoglobin contains two histidine residues in helices E and F.

<p>True (A)</p> Signup and view all the answers

What are the two histidine residues in helices E and F called?

<p>The two histidine residues in helices E and F are called E7 and F8, respectively.</p> Signup and view all the answers

What is F8 His designated as?

<p>F8 His is designated as proximal His.</p> Signup and view all the answers

What is a prosthetic group?

<p>A prosthetic group is a non-protein group that is covalently attached to a protein.</p> Signup and view all the answers

Heme is a flat molecule.

<p>True (A)</p> Signup and view all the answers

What are the four cyclic groups in heme called?

<p>The four cyclic groups in heme are called pyrrole rings.</p> Signup and view all the answers

Where does iron bind in the heme group?

<p>Iron can bind in the center of the four pyrrole rings.</p> Signup and view all the answers

Iron in the heme group is generally in the ferric state (Fe3+).

<p>False (B)</p> Signup and view all the answers

How many bonds can iron form?

<p>Iron can form six bonds.</p> Signup and view all the answers

What prevents oxidation of iron in myoglobin?

<p>The hydrophobic interior of myoglobin prevents oxidation of iron.</p> Signup and view all the answers

Hemoglobin is a tetrameric protein.

<p>True (A)</p> Signup and view all the answers

The alpha chains of hemoglobin contain 8 alpha-helices.

<p>False (B)</p> Signup and view all the answers

How do the chains of hemoglobin interact with each other?

<p>The chains of hemoglobin interact with each other mainly through hydrophobic interactions.</p> Signup and view all the answers

Hemoglobin binds oxygen with a higher affinity than myoglobin.

<p>False (B)</p> Signup and view all the answers

What is the P50 value for myoglobin?

<p>The P50 value for myoglobin is approximately 2.8 torr.</p> Signup and view all the answers

What type of curve does the saturation curve of hemoglobin binding to oxygen have?

<p>The saturation curve of hemoglobin binding to oxygen has a sigmoidal shape.</p> Signup and view all the answers

What is the R-state of hemoglobin?

<p>The R-state of hemoglobin is known as the relaxed state.</p> Signup and view all the answers

How does the binding of oxygen cause a conformational change in hemoglobin?

<p>Binding of oxygen to hemoglobin causes a conformational change, shifting it from the low-affinity T-state to the high-affinity R-state.</p> Signup and view all the answers

Hemoglobin releases oxygen in tissues where the oxygen pressure is high.

<p>False (B)</p> Signup and view all the answers

What is the significance of the sigmoidal shape of the hemoglobin saturation curve?

<p>The sigmoidal shape of the hemoglobin saturation curve is a result of cooperative binding, which ensures efficient delivery of oxygen to tissues.</p> Signup and view all the answers

A sudden drop in pulmonary capillary oxygen tension significantly affects hemoglobin saturation.

<p>False (B)</p> Signup and view all the answers

Flashcards

Structure-function relationship

The relationship between the structure of a molecule and its function. For example, how the shape of an enzyme allows it to bind to a specific substrate.

Globular proteins

Proteins with a compact, spherical shape. They are usually soluble in water and have a diverse range of functions.

Myoglobin

A protein found in muscle tissue that stores oxygen for use during periods of high energy demand.

Hemoglobin

A protein found in red blood cells that transports oxygen from the lungs to the body's tissues and also helps transport carbon dioxide back to the lungs.

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Hemoproteins

Myoglobin and hemoglobin are both examples of hemoproteins. Hemoproteins contain a heme group, a non-protein molecule tightly bound to the protein.

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Prosthetic group

A prosthetic group is a non-protein molecule that is tightly bound to a protein and is essential for its function. Think of it as a sidekick to the protein.

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Heme group

The heme group is a flat molecule with a central iron atom. It's the part of hemoglobin and myoglobin that binds oxygen.

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Myoglobin as a monomer

Myoglobin is a single protein chain, also known as a monomer.

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Forms of myoglobin

Myoglobin exists in two forms: oxymyoglobin, which is bound to oxygen, and deoxymyoglobin, which is not bound to oxygen.

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Tertiary structure of myoglobin

The tertiary structure of myoglobin is a compact, folded chain of amino acids with eight alpha-helices.

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Hydrophilic amino acids on surface

Amino acids on the surface of a globular protein are typically hydrophilic, meaning they are attracted to water. This allows the protein to dissolve in water.

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Hydrophobic amino acids in interior

Amino acids in the interior of a globular protein are typically hydrophobic, meaning they repel water. This helps the protein maintain its compact shape.

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Histidine residues in myoglobin

Two histidine residues in myoglobin, designated as E7 and F8, play important roles in oxygen binding.

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Proximal histidine

The F8 histidine residue in myoglobin is called the 'proximal histidine' because it is directly attached to the iron atom in the heme group.

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Distal histidine

The E7 histidine residue in myoglobin is called the 'distal histidine' because it is located on the opposite side of the heme group from the proximal histidine.

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Heme group structure

Both myoglobin and hemoglobin contain a heme group, which is a flat molecule with four nitrogen-containing rings arranged in a ring structure.

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Iron bonds in heme

The iron atom in the heme group can form six bonds: four to the nitrogen atoms in the rings, one to the proximal histidine, and one to oxygen.

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Iron states and oxygen binding

When iron is in the ferrous state (Fe2+), it can bind oxygen. However, when it is oxidized to the ferric state (Fe3+), it can't bind oxygen.

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Heme group interaction

The heme group fits snugly into a hydrophobic pocket in the protein, creating a stable interaction. This hydrophobic pocket helps prevent oxidation of the iron atom.

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Distal histidine as a gate

The distal histidine acts like a gate, controlling the entry and exit of oxygen to the heme binding site. It prevents the binding of other molecules, such as carbon monoxide, that could interfere with oxygen transport.

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Myoglobin's oxygen affinity

Myoglobin binds oxygen with high affinity, meaning it holds onto oxygen tightly. This is essential for its role in oxygen storage.

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P50 value

P50 is the partial pressure of oxygen required for 50% of the protein molecules to be saturated with oxygen.

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Hemoglobin structure

Hemoglobin is a tetrameric protein, meaning it is made up of four protein chains.

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Hemoglobin subunits

Hemoglobin is made up of two alpha chains and two beta chains.

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Chain interaction in hemoglobin

The individual chains in hemoglobin interact with each other through hydrophobic interactions, creating a stable structure.

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Hemoglobin's oxygen binding function

Hemoglobin must bind oxygen efficiently in the lungs, become saturated with oxygen, and then efficiently release oxygen in the tissues where oxygen pressure is lower.

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Hemoglobin's saturation curve

The saturation curve for hemoglobin is sigmoidal, meaning it has an S-shape. This shape reflects the cooperative binding of oxygen to hemoglobin.

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Hemoglobin as an allosteric protein

Hemoglobin is an allosteric protein, meaning that binding of one molecule to one part of the protein affects binding of another molecule to a different part of the protein.

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T-state and R-state

Hemoglobin exists in two states: the T-state (tense) and the R-state (relaxed). The T-state has low oxygen affinity, while the R-state has high oxygen affinity.

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Oxygen binding and conformational change

When oxygen binds to heme, it triggers a conformational change in the hemoglobin molecule, shifting it from the low-affinity T-state to the high-affinity R-state.

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Conformational change upon oxygen binding

When heme is free of oxygen, it has a domed structure, and the iron atom is outside the plane of the heme group. When oxygen binds, the heme becomes planar, and the iron atom moves into the plane of the heme, pulling the proximal histidine along with it.

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Changes in hemoglobin structure

This change in the heme group triggers changes in the tertiary structure of individual hemoglobin subunits and breaks electrostatic bonds between the chains. This ultimately leads to an increase in oxygen affinity.

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Study Notes

Structure-Function Relationship: Globular Proteins (Myoglobin and Hemoglobin)

  • Myoglobin stores oxygen in muscle tissue. Release occurs during oxygen deprivation.
  • Hemoglobin transports oxygen and carbon dioxide, and buffers blood.

Hemoproteins

  • Myoglobin and hemoglobin are hemoproteins.
  • Hemoproteins contain heme as a prosthetic group (a non-protein group).
  • The protein environment dictates the heme's function.

Structure of Myoglobin

  • Myoglobin is a monomeric protein primarily found in muscle tissue.
  • It contains a heme group, a prosthetic group.
  • It exists in two forms: oxymyoglobin (oxygen-bound) and deoxymyoglobin (oxygen-free).
  • The tertiary structure consists of eight alpha-helices connected by short non-helical regions.

Arrangement of Amino Acids in Myoglobin

  • Amino acid R-groups exposed on the protein's surface are generally hydrophilic.
  • Amino acid R-groups in the protein's interior are predominantly hydrophobic.
  • Two histidine residues (E7 and F8) are exceptions: F8 is proximal His, and E7 is distal His.

Heme Group

  • Both myoglobin and hemoglobin contain a heme group.
  • The heme group is a prosthetic group covalently attached to the protein.
  • The heme group is a flat molecule with four pyrrole rings.
  • The structure contains iron (Fe) in its ferrous state (Fe2+).

Iron

  • Iron binds in the center of the heme group's four rings.
  • Iron is in the ferrous state (Fe2+) and forms 6 bonds.
  • Four bonds are with ring nitrogens.
  • One bond is with a histidine imidazole (proximal histidine).
  • One bond is with oxygen (O2).
  • Oxidation of iron (to Fe3+) prevents oxygen binding.
  • Heme absorbs light and gives a deep red color.

Structure-Function Relationship (Myoglobin)

  • The planar heme group fits into a hydrophobic pocket in the protein.
  • The myoglobin-heme interaction is stabilized by hydrophobic attractions.
  • The heme group stabilizes myoglobin's tertiary structure.
  • The distal histidine acts as a gate. It opens and closes as oxygen enters and exits the hydrophobic pocket, binding to heme.
  • The hydrophobic interior prevents iron oxidation, so the iron remains in the Fe2+ state and can bind another oxygen molecule.

Oxygen Binding to Myoglobin

  • Myoglobin binds oxygen with a high affinity.
  • The P50 (oxygen partial pressure required for 50% saturation) for myoglobin is approximately 2.8 torr or mm Hg.
  • Myoglobin is almost fully saturated with oxygen at normal tissue conditions (around 20 mm Hg).
  • The oxygen binding curve for myoglobin is hyperbolic.

Hemoglobin

  • Hemoglobin is a tetrameric hemeprotein (four protein chains: two alpha and two beta).
  • Each globin chain contains multiple alpha-helices.

Chain Interaction (Hemoglobin)

  • The chains interact via hydrophobic interactions.
  • Hydrophobic amino acids are present in both the interior and on the surface of protein chains.

Oxygen Binding to Hemoglobin

  • Hemoglobin binds oxygen efficiently and becomes saturated in lungs (around 100 mm Hg).
  • It releases oxygen in tissues where oxygen pressure is low (around 20 mm Hg).

Hemoglobin Saturation Curve

  • The curve is sigmoidal (S-shaped)
  • At 100 mm Hg, hemoglobin is 95-98% saturated with oxygen.
  • Contrast to myoglobin, hemoglobin's P50 is ~26 mm Hg.

The Two Structures of Hemoglobin

  • Hemoglobin exists in both low-affinity (T-state) and high-affinity (R-state) structures.
  • The transition between these states is triggered by oxygen binding.

Hemoglobin is Allosteric

  • Hemoglobin is allosteric: binding of a molecule at one site affects binding at a different site.
  • Hemoglobin exists in two forms, T-state (taut/tense) and R-state (relaxed).
  • The T-state has a low oxygen affinity. The R-state has a high oxygen affinity.
  • Binding of oxygen causes conformational changes, shifting from the low-affinity T-state to the high-affinity R-state.

Oxygen Binding to Hemoglobin (2)

  • Weak ionic and hydrogen bonds in deoxygenated hemoglobin.
  • Strong hydrophobic interactions within oxyhemoglobin.

How Does the Structure Change?

  • When heme is free of oxygen, it has a domed structure and the iron is outside the heme plane.
  • When oxygen binds to iron, the heme adopts a planar structure, pulling the proximal histidine into the plane.

How Does the Structure Change? (2)

  • Movement of iron and His triggers changes in the tertiary structure of individual hemoglobin subunits.
  • Breakage of electrostatic bonds occurs in other oxygen-free hemoglobin chains.
  • Myoglobin helix movement does not affect protein function.

The Saturation Curve is Sigmoidal (Cooperative)

  • Conformational changes lead to cooperativity among binding sites.
  • Binding of the first oxygen molecule breaks some salt bridges and increases the affinity.
  • Binding further oxygen increases affinity even more.
  • Binding is cooperative.

Protective Mechanism(High altitudes)

  • A sudden drop in pulmonary capillary oxygen tension does not affect hemoglobin saturation.

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