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Questions and Answers
What does the half-life of a radioactive isotope indicate?
What does the half-life of a radioactive isotope indicate?
Which method is used for dating fossils up to 75,000 years old?
Which method is used for dating fossils up to 75,000 years old?
What happens to carbon-14 in a living organism once it dies?
What happens to carbon-14 in a living organism once it dies?
What phenomenon caused the extinction of many anaerobic prokaryotic groups during the oxygen revolution?
What phenomenon caused the extinction of many anaerobic prokaryotic groups during the oxygen revolution?
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How can the age of older fossils found in sedimentary rocks be determined?
How can the age of older fossils found in sedimentary rocks be determined?
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What did A.I. Oparin and J.B.S. Haldane hypothesize about the early atmosphere?
What did A.I. Oparin and J.B.S. Haldane hypothesize about the early atmosphere?
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Which process was suggested by Haldane as a source of energy for forming organic compounds?
Which process was suggested by Haldane as a source of energy for forming organic compounds?
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Where did early organic compounds likely form according to research?
Where did early organic compounds likely form according to research?
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What did Miller and Urey's experiments in 1953 demonstrate?
What did Miller and Urey's experiments in 1953 demonstrate?
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Which condition is expected to have influenced the formation of organic compounds near deep-sea vents?
Which condition is expected to have influenced the formation of organic compounds near deep-sea vents?
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What was one significant aspect of the a pH gradient in the early oceans?
What was one significant aspect of the a pH gradient in the early oceans?
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What significant finding was made regarding meteorites?
What significant finding was made regarding meteorites?
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What two researchers conducted experiments that indicated abiotic synthesis of organic molecules?
What two researchers conducted experiments that indicated abiotic synthesis of organic molecules?
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What might have led to the dominance of certain RNA molecules in the RNA world?
What might have led to the dominance of certain RNA molecules in the RNA world?
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What was the likely composition of the first protocells?
What was the likely composition of the first protocells?
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What is the term used by Haldane to describe the early oceans rich in organic molecules?
What is the term used by Haldane to describe the early oceans rich in organic molecules?
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In what environment might the first cells have formed according to modern hypotheses?
In what environment might the first cells have formed according to modern hypotheses?
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Why was accurate replication important as genomes grew larger?
Why was accurate replication important as genomes grew larger?
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What does the fossil record primarily reveal?
What does the fossil record primarily reveal?
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What characteristic of species tends to bias the fossil record?
What characteristic of species tends to bias the fossil record?
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What is a limitation of the fossil record?
What is a limitation of the fossil record?
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What does the transition from RNA to DNA facilitate?
What does the transition from RNA to DNA facilitate?
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What kind of rocks are primarily associated with fossil findings?
What kind of rocks are primarily associated with fossil findings?
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Why might few individuals have become fossils?
Why might few individuals have become fossils?
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Which of the following is NOT a factor that influences the representation of species in the fossil record?
Which of the following is NOT a factor that influences the representation of species in the fossil record?
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What was one of the first steps that may have led to the origin of life on early Earth?
What was one of the first steps that may have led to the origin of life on early Earth?
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What significant event occurred about 4 billion years ago that set the stage for life to begin on Earth?
What significant event occurred about 4 billion years ago that set the stage for life to begin on Earth?
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Which of the following best describes the condition of Earth's early atmosphere?
Which of the following best describes the condition of Earth's early atmosphere?
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What was one possible consequence of the high temperatures on early Earth?
What was one possible consequence of the high temperatures on early Earth?
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Which molecule type is indicated as a possible product of the process of packaging molecules into protocells?
Which molecule type is indicated as a possible product of the process of packaging molecules into protocells?
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What component of early Earth's atmosphere contributed to its low molecular weight and likely escaped into space?
What component of early Earth's atmosphere contributed to its low molecular weight and likely escaped into space?
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Which process is hypothesized to have made inheritance possible during the origin of life?
Which process is hypothesized to have made inheritance possible during the origin of life?
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What role did the bombardment of Earth by asteroids or comets play in the formation of life?
What role did the bombardment of Earth by asteroids or comets play in the formation of life?
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What may have been a key property of early protocells?
What may have been a key property of early protocells?
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What role does Montmorillonite clay play in the formation of protocells?
What role does Montmorillonite clay play in the formation of protocells?
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Which molecule may have originally served as the first genetic material?
Which molecule may have originally served as the first genetic material?
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What is a potential advantage of using clay in the polymerization of RNA nucleotides?
What is a potential advantage of using clay in the polymerization of RNA nucleotides?
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Which statement best describes ribozymes?
Which statement best describes ribozymes?
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What characteristic is NOT typically associated with protocells?
What characteristic is NOT typically associated with protocells?
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What is the significance of the spontaneous formation of vesicles by lipids?
What is the significance of the spontaneous formation of vesicles by lipids?
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How can early forms of life be theorized to have evolved?
How can early forms of life be theorized to have evolved?
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Which properties are generally associated with the vesicles formed in proto-cellular theories?
Which properties are generally associated with the vesicles formed in proto-cellular theories?
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What is the result of dripping RNA nucleotide solutions onto hot surfaces?
What is the result of dripping RNA nucleotide solutions onto hot surfaces?
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Study Notes
Lecture 2: Organisms in their Environment
- Lecture date: January 10, 2025
- Course: BES 108D
- Instructor: Dr. Benazir Alam
- Topic 1: Prokaryotes: Bacteria and Archaea, Chapter 25: The History of Life on Earth
- Chemical and physical processes on early Earth led to simple cells through stages:
- Abiotic synthesis of small organic molecules (e.g., amino acids, nitrogenous bases)
- Joining of small molecules into macromolecules (e.g., proteins, nucleic acids)
- Packaging of molecules into protocells with membranes, maintaining internal chemistry different from surroundings
- Origin of self-replicating molecules enabling inheritance
Synthesis of Organic Compounds on Early Earth
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About 4.6 billion years ago, solar system formed from a rotating disk of gas, rocks, and dust.
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For the first few hundred million years, Earth was bombarded by asteroids/comets, releasing significant heat and preventing seas from forming until 4.2 to 3.9 billion years ago.
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This bombardment ended 4 billion years ago, setting the stage for life's origin.
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Earth's initial atmosphere had little oxygen; it contained: Water vapour, Volcanic chemicals (nitrogen, nitrogen oxides, carbon dioxide, methane, ammonia, hydrogen, hydrogen sulfide).
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As Earth cooled, water vapor condensed to form oceans.
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Much of the hydrogen escaped into space due to low molecular weight and high Earth temperatures.
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Hydrogen could have reacted with oxygen to form water.
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This reduced the amount of hydrogen in the atmosphere.
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In 1920s, Oparin and Haldane independently hypothesized that early atmospheres were reducing environments (electron gaining is common in anaerobic conditions).
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Organic compounds may have formed from simpler molecules using energy from lightning and UV radiation.
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Haldane suggested that early oceans were a solution of organic molecules ("primitive soup").
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Miller-Urey experiments in 1953 demonstrated the possibility of abiotic synthesis of organic molecules in a reducing atmosphere
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First organic compounds may have originated near volcanoes or deep-sea vents.
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Miller-Urey-type experiments showed that organic molecules could form in various atmospheres.
Amino Acid Synthesis in Simulated Volcanic Eruptions
- Comparison of 1953 and 2008 reanalysis experiments.
- Showed higher amounts of amino acids in the 2008 experiment.
Organic Compounds Produced Near Deep-Sea Vents
- Some deep sea alkaline vents produce warm, high pH water (9-11, 40-90°C).
- This could have created a suitable environment for abiotic synthesis of organic molecules and the first cells.
- Early oceans were acidic, resulting in a pH gradient between vents and surrounding water.
- Energy for the synthesis of organic compounds could have come from this pH gradient.
Abiotic Synthesis of Macromolecules
- Amino acids and other key organic molecules (lipids, simple sugars, nitrogenous bases) have been found in meteorites.
- RNA monomers (adenine, guanine, cytosine, and uracil) can also form spontaneously from simpler molecules.
- Scientists have produced polymers of these molecules by dripping solutions of amino acids or RNA nucleotides onto heated surfaces (e.g., sand, clay, rock), without the help of enzymes or ribosomes.
- Minerals in clay or rock can catalyze the polymerization of small molecules into larger chains of proteins or RNA.
Protocells
- A protocell is a theoretical model of an early form of life structure resembling a cell but simpler.
- Protocells are a step in the transition from non-living chemical systems to living organisms.
- Protocells may have been fluid-filled vesicles with a membrane-like structure formed from lipids and other organic molecules.
- Protocells can spontaneously form vesicles in water.
- Adding clay can increase the rate of vesicle formation.
- Vesicles exhibit simple reproduction and metabolism, as well as maintaining an internal chemical environment.
Self-Replicating RNA
- RNA, not DNA, was likely the first genetic material.
- RNA plays a crucial role in protein synthesis and acts as an enzyme-like catalyst (ribozymes).
- Ribozymes can produce complementary copies of short RNA stretches using nucleotide building blocks.
- Natural selection at a molecular level may have favoured stable and fast-replicating ribozyme variations.
- Small RNA molecules could have replicated, storing genetic information about the vesicles that carried them.
- Protocells with replicating RNA would have been primitive cells but with limited genetic information encoding only a few properties.
- RNA could serve as a template for the development of DNA, a more stable and efficiently replicating genetic material.
Transition from RNA to DNA
- Accurate replication was crucial as genomes grew, through duplication and other processes.
- Development of genetic information in protocells led to new life forms.
- The fossil record documents this progression of life.
The Fossil Record
- The fossil record shows changes in life on Earth.
- Sedimentary rocks, deposited in layers (strata), are a primary source of fossils.
- Fossils provide an incomplete picture of evolution; Many organisms did not fossilize, many fossils have been destroyed, and many have not been discovered yet.
- The fossil record is biased towards abundant, widespread species that possessed hard parts.
The Geologic Record
- A record of geological events, illustrating the order (time-line) that life appeared on Earth in the geologic past.
- Provides a timeline for geological/evolutionary events.
How Rocks and Fossils Are Dated
- Sedimentary strata reveal the relative ages of fossils.
- Radiometric dating determines the absolute ages-A radioactive isotope decays to a daughter product at a constant rate.
- Isotopes decay at known and unchanging half-lives independent of external conditions allowing for accurate dating.
- Carbon-14 dating is used to date fossils up to 75,000 years old.
- Older fossils can be dated by examining the surrounding geological layers.
Radiometric Dating
- Living organisms contain carbon-12, and a small amount of a radioactive carbon-14.
- When an organism dies, carbon-14 stops accumulating and decays into nitrogen.
- Measuring the ratio of carbon-14 to carbon-12 reveals the age of the fossil.
- Radiocarbon dating is used to date fossils up to 75,000 years old.
- By analysing sedimentary layers surrounding fossils and volcanic layers, scientists can approximate the absolute age of older fossils.
Oxygen Revolution
- The initial rise of oxygen (O2) in the atmosphere was likely due to oxygenic photosynthetic prokaryotes.
- Later increases in atmospheric O2 could have originated from the development of eukaryotic cells containing chloroplasts.
- This "oxygen revolution" (2.7 - 2.4 billion years ago) caused extinction in many anaerobic prokaryotic groups.
- Survivors adapted to using cellular respiration to harvest energy.
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Description
This quiz explores the concepts of radiometric dating and the significance of half-life in understanding radioactive isotopes. It addresses methods for dating fossils, the behavior of carbon-14 post-mortem, and the implications of the oxygen revolution on ancient life. Test your knowledge on how geologists determine the ages of fossils found in sedimentary rocks.