Proteins and Nucleic Acids Structure

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Questions and Answers

Which of the following characteristics of phospholipids contributes to the selective permeability of biological membranes?

  • The rigid structure of saturated fatty acid tails that prevents molecule passage.
  • The amphipathic nature, having both hydrophobic and hydrophilic regions. (correct)
  • The ability of the polar head groups to form strong hydrogen bonds with water.
  • The presence of phosphate groups that create a hydrophilic barrier.

An enzyme catalyzes a reaction with a substrate concentration that is significantly lower than the enzyme's $K_m$ value. What effect will increasing the substrate concentration have on the reaction rate?

  • The reaction rate will remain constant as substrate concentration does not affect it.
  • The reaction rate will decrease due to increased product inhibition.
  • The reaction rate will decrease due to the saturation of the enzyme.
  • The reaction rate will increase until it reaches $V_{max}$. (correct)

In a eukaryotic cell, which of the following organelles is primarily involved in the modification and sorting of proteins synthesized by ribosomes on the rough endoplasmic reticulum?

  • Peroxisome
  • Mitochondrion
  • Golgi apparatus (correct)
  • Lysosome

If a cell is placed in a hypertonic solution, what will most likely occur due to osmosis?

<p>Water will move out of the cell, causing it to shrink. (C)</p> Signup and view all the answers

Which type of cell-cell junction provides a direct cytoplasmic connection between adjacent animal cells, allowing the passage of small molecules and ions?

<p>Gap junctions (D)</p> Signup and view all the answers

Flashcards

Primary (1°) Protein Structure

The sequence of amino acids in a polypeptide chain.

Secondary (2°) Protein Structure

Regions of repetitive coiling or folding of the polypeptide backbone due to hydrogen bonds between constituents of the backbone (not the side chains).

Tertiary (3°) Protein Structure

The overall three-dimensional shape of a polypeptide resulting from interactions between the side chains (R groups) of the amino acids.

Quaternary (4°) Protein Structure

The association of two or more polypeptides (subunits).

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Peptide Bond

A type of covalent bond joining adjacent amino acids during protein synthesis (dehydration reaction).

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Study Notes

  • Amino acids have a specific structure.
  • Amino acids have an N-terminus and a C-terminus.
  • Amino acids can be either hydrophilic or hydrophobic.
  • Monomers are small subunits that can be linked together to form a polymer through a process called polymerization.
  • Peptide bonds link amino acids together.
  • Proteins have four levels of structure: primary, secondary, tertiary, and quaternary.
  • Protein folding is the process by which a protein attains its functional shape.
  • Enzymes are proteins that act as catalysts.
  • Enzymes reduce the energy of activation required for a chemical reaction to proceed.
  • Substrates bind to the active sites of enzymes, where the chemical reaction occurs.
  • Competitive enzyme inhibitors bind to the active site, while non-competitive inhibitors bind to a different site on the enzyme.

Nucleic Acids Structure

  • Nucleotides are composed of a sugar, a phosphate group, and a nitrogenous base.
  • The sugar in nucleotides can be either ribose or deoxyribose.
  • Nitrogenous bases are either purines or pyrimidines, and they exhibit complementary base pairing (A with T/U, and G with C).
  • Phosphodiester bonds link nucleotides together.
  • Nucleic acids have primary and secondary structures.
  • DNA's function is to store genetic information.
  • RNA has various structures and functions in the cell.

Carbohydrates

  • Carbohydrates have specific structures and functions.
  • Monosaccharides are the monomer subunits of carbohydrates.
  • Glycosidic linkages connect monosaccharides together.
  • Starch, glycogen, and cellulose are all polysaccharides composed of glucose monomers.
  • Glycogen is a storage form of glucose in animals.

Lipids and Membranes

  • Lipids have diverse structures and physical properties.
  • Hydrocarbons are a key component of many lipids.
  • Fats can be saturated, unsaturated, or trans.
  • Phospholipids have a polar head and nonpolar tails.
  • Phospholipids form a bilayer in water due to their amphipathic nature.
  • Amphipathic molecules have both hydrophilic and hydrophobic regions.
  • Cell membranes are selectively permeable.
  • Membrane structure influences its permeability.
  • Diffusion and osmosis are forms of passive transport.
  • Passive transport does not require energy, while active transport does.
  • Tonicity refers to the relative concentration of solutes in two solutions (isotonic, hypertonic, and hypotonic).

Inside the Cell

  • All cells share certain features.
  • Prokaryotic cells lack membrane-bound organelles, while eukaryotic cells possess them.
  • Organelles include the smooth and rough endoplasmic reticulum, Golgi apparatus, peroxisomes, lysosomes, mitochondria, chloroplasts, vacuoles.
  • The smooth endoplasmic reticulum is involved in lipid synthesis.
  • The rough endoplasmic reticulum contains ribosomes and is involved in protein synthesis.
  • The Golgi apparatus processes and packages proteins.
  • Peroxisomes are involved in detoxification.
  • Lysosomes contain enzymes for breaking down cellular waste.
  • Mitochondria are the site of cellular respiration.
  • Chloroplasts are the site of photosynthesis in plant cells.
  • Vacuoles have various storage and structural roles.
  • Cells have structures such as a cell wall, cytoskeleton, and ribosomes.
  • The cell wall provides support and protection.
  • The cytoskeleton (actin microfilaments, intermediate filaments, microtubules) provides structural support and facilitates movement.
  • Ribosomes are the site of protein synthesis.
  • Compartmentalization increases efficiency.

Cell-Cell Interactions

  • Cells interact through extracellular layers (cell walls and extracellular matrix).
  • Lamella is the middle layer of the cell wall.
  • Tight junctions seal cells together.
  • Desmosomes connect the cytoskeleton of cells.
  • Plasmodesmata are channels between plant cells.
  • Gap junctions are channels between animal cells.

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