Protein Structure and Function
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Questions and Answers

What is the primary advantage of using cryo-electron tomography (Cryo-ET) in understanding protein structures?

  • To purify proteins and remove interacting partners
  • To understand the intricate structures of proteins through isolation
  • To directly determine macromolecules within their native cellular environment (correct)
  • To identify new components through fixation artifacts

What can be improved during protein isolation to obtain better results?

  • Using faster freezing techniques
  • Using different grids to change surface properties
  • Using detergents to change the surface properties
  • All of the above (correct)

What is a characteristic of proteins in cells?

  • They are present in relatively large quantities
  • They are only interactive with cytoskeletal structures
  • They are present in relatively small quantities (correct)
  • They are static and unchanging

What is the primary goal of cryo-electron tomography?

<p>To determine macromolecules within their native cellular environment (C)</p> Signup and view all the answers

Why is it important to consider protein orientation during imaging?

<p>To improve the resolution of the image (B)</p> Signup and view all the answers

What type of detector is used in cryo-electron tomography?

<p>Direct electron detector (B)</p> Signup and view all the answers

What is a benefit of using cryo-electron tomography in understanding macromolecular structures?

<p>Mapping the structure probability within the cell (C)</p> Signup and view all the answers

What is a characteristic of the interactive landscape in cells?

<p>It is dynamic and interconnected (C)</p> Signup and view all the answers

What is the purpose of using a focused beam of gallium ions in Cryo-FIB milling?

<p>To thin the vitrified sample by removing surface atoms (C)</p> Signup and view all the answers

Why is Cryo-FIB thinning preferred over mechanical sectioning at cryo-temperatures?

<p>It avoids intrinsic cutting artifacts (C)</p> Signup and view all the answers

What problem might arise from the predetermined orientation of regions of interest in vitrified whole organisms like C.elegans?

<p>Orientation may interfere with data collection (D)</p> Signup and view all the answers

What role does reorientation of lamella play in addressing data completeness problems?

<p>It provides access to previously obscured regions (C)</p> Signup and view all the answers

What issue might arise from the arrangement of cellular structures on grids?

<p>Interference with analysis due to similar orientation (C)</p> Signup and view all the answers

What is the function of a platinum coating in Cryo-FIB milling?

<p>To provide structural support during ion beam milling (B)</p> Signup and view all the answers

Which molecular structure is visualized at the highest resolution using cryo-ET according to the provided data?

<p>dNTPase (C)</p> Signup and view all the answers

What is the primary reason for using high pressure freezing (HPF) for samples thicker than 10 µm?

<p>To reduce crystalline ice formation (A)</p> Signup and view all the answers

Which publication discusses the identification of a novel RNAP-ribosome supercomplex?

<p>Cell, 183 (3): 730-738.e13 (2020) (B)</p> Signup and view all the answers

What is the resolution of the Influenza A matrix protein M1 as visualized by cryo-ET?

<p>8.0 Ã… (A)</p> Signup and view all the answers

What is the expected outcome if crystalline ice forms during plunge freezing?

<p>Damage to the native sample (D)</p> Signup and view all the answers

Which macromolecular structure has a resolution of 7.7 Ã… as determined by cryo-ET?

<p>Clathrin/AP2 coat assembled on mem. (B)</p> Signup and view all the answers

Which factor is essential to avoid sample damage while preparing thick samples for cryo-ET?

<p>Ensuring high cooling rate (A)</p> Signup and view all the answers

What is the resolution disparity between the SARS-CoV-2 spike glycoprotein and the Reovirus SLP?

<p>1.7 Ã… (A)</p> Signup and view all the answers

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