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Questions and Answers
What is the purpose of centrifuging the solution at 15,000 ×g for 10 min at 4°C in the ammonium sulphate precipitation method?
What is the purpose of centrifuging the solution at 15,000 ×g for 10 min at 4°C in the ammonium sulphate precipitation method?
To pellet out the protein.
Why is it important to carefully transfer out as much supernatant as possible after centrifugation in the ammonium sulphate precipitation method?
Why is it important to carefully transfer out as much supernatant as possible after centrifugation in the ammonium sulphate precipitation method?
To collect the precipitated protein.
What is the purpose of adding more saturated ammonium sulphate or solid ammonium sulphate to the supernatant in the ammonium sulphate precipitation method?
What is the purpose of adding more saturated ammonium sulphate or solid ammonium sulphate to the supernatant in the ammonium sulphate precipitation method?
To make the next concentration and repeat the process.
What is the benefit of using ammonium sulphate precipitation as a protein purification technique?
What is the benefit of using ammonium sulphate precipitation as a protein purification technique?
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What would be the effect on protein activity if the enzyme was not properly purified?
What would be the effect on protein activity if the enzyme was not properly purified?
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What is the purpose of dialysis in protein purification?
What is the purpose of dialysis in protein purification?
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How is enzyme activity typically measured in an enzyme activity assay?
How is enzyme activity typically measured in an enzyme activity assay?
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What is the purpose of determining protein concentration?
What is the purpose of determining protein concentration?
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Describe the purpose of using ammonium sulfate in protein purification.
Describe the purpose of using ammonium sulfate in protein purification.
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What is the principle behind dialysis in protein purification?
What is the principle behind dialysis in protein purification?
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What is the key difference between a standard curve and a blank in a protein concentration determination assay?
What is the key difference between a standard curve and a blank in a protein concentration determination assay?
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Explain the importance of a control group in an enzyme activity assay.
Explain the importance of a control group in an enzyme activity assay.
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Describe the relationship between protein concentration and absorbance in a spectrophotometric assay.
Describe the relationship between protein concentration and absorbance in a spectrophotometric assay.
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Why is it important to maintain a constant temperature during an enzyme activity assay?
Why is it important to maintain a constant temperature during an enzyme activity assay?
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Describe how to interpret the results of an enzyme activity assay using a graph.
Describe how to interpret the results of an enzyme activity assay using a graph.
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Why is it important to choose the correct wavelength for measuring absorbance in a spectrophotometer?
Why is it important to choose the correct wavelength for measuring absorbance in a spectrophotometer?
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Describe the purpose of ammonium sulfate precipitation in protein purification.
Describe the purpose of ammonium sulfate precipitation in protein purification.
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What is the role of dialysis in protein purification, and how does it work?
What is the role of dialysis in protein purification, and how does it work?
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Why is it important to maintain a low temperature (4°C) during the dialysis process?
Why is it important to maintain a low temperature (4°C) during the dialysis process?
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Explain how the enzyme activity of a protein is determined.
Explain how the enzyme activity of a protein is determined.
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What is the purpose of the Bradford assay in protein purification?
What is the purpose of the Bradford assay in protein purification?
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Why is it important to dissolve protein pellets in 0.1 M Phosphate pH 7.5 buffer before performing enzyme activity and protein concentration assays?
Why is it important to dissolve protein pellets in 0.1 M Phosphate pH 7.5 buffer before performing enzyme activity and protein concentration assays?
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How does changing the buffer during dialysis accelerate the removal of ammonium sulfate?
How does changing the buffer during dialysis accelerate the removal of ammonium sulfate?
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What are the key differences between enzyme activity and protein concentration assays?
What are the key differences between enzyme activity and protein concentration assays?
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Study Notes
Protein Precipitation and Purification
- Different percentages of ammonium sulfate create various protein precipitation levels, affecting protein recovery efficiency.
- At 0% ammonium sulfate concentration, recovery is highest at 10.6%, decreasing as concentration increases, with 100% showing no recovery.
- Centrifugation process at 15,000 ×g for 10 minutes at 4°C is essential for pellet formation when using highly concentrated ammonium sulfate.
- Challenges exist in recovering precipitate due to high density of ammonium sulfate solutions.
Recovery and Concentration Process
- Careful removal of supernatant is vital after centrifugation; maximum recovery is achieved by transferring as much supernatant as possible.
- More ammonium sulfate is added to the remaining supernatant for subsequent concentrations, and the process of stirring and centrifugation is repeated.
- Protein pellets are dissolved in 0.1 M Phosphate buffer at pH 7.5 for analysis of enzyme activity and protein concentration, using enzyme assays and Bradford assay techniques.
Dialysis for Ammonium Sulfate Removal
- Ammonium sulfate is removed from protein solutions to proceed with enzyme purification, typically using dialysis.
- Dialysis involves placing protein solution in a selectively permeable membrane bag and immersing it in a larger volume of buffer (such as 50 mM Tris-Cl pH 7.0).
- Maintaining a low temperature (around 4°C) during dialysis is crucial for enzyme stability during purification.
- Small molecules like ammonium and sulfate ions can pass through dialysis membrane pores, allowing for equilibration outside the bag, while proteins are retained.
- Initial cloudy appearance of the ammonium sulfate fraction indicates a high concentration, which becomes clearer as dialysis proceeds.
- Full equilibration in the 1L buffer typically occurs in about 2 hours, with buffer changes encouraging faster dialysis completion.
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